diff options
Diffstat (limited to 'Master/texmf-dist/doc')
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG | 27 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/README | 2 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf | 210 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf | bin | 280288 -> 279915 bytes | |||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.tex | 2 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps | 45 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf | 1063 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf | bin | 562299 -> 584030 bytes | |||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex | 395 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf | bin | 178790 -> 177927 bytes | |||
| -rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex | 98 |
11 files changed, 912 insertions, 930 deletions
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG b/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG index 5c6e22e7968..8df1b8c52cb 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG +++ b/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG @@ -1,6 +1,31 @@ ******************************************************************************* - Changelog of mcf2graph software package by Akira Yamaji 2019-02-11 + Changelog of mcf2graph software package by Akira Yamaji 2019-03-21 ******************************************************************************* +[ver. 4.40 / 2019-03-21] + -add function MC() + -change function name MCa() => MCat() + -delete function MCc(),MCd(),MCf() + -add angle parameter mangle + -add size parameter + thickness_mframe + -change size parameter name + bond_len => blength + max_bond_length => max_blength + font_wd,font_ht => fsize(w,h) + margin_left_right,margin_top_bottom + => fmargin(w,h) + thickness_font_frame => thickness_fframe + thickness_atom_frame => thickness_aframe + -delete ratio parameter ratio_bond_width + -delete option parameter sw_solid + -change option parameter name + sw_clip => sw_trimming + sw_bond_single => sw_single + sw_fomt_frame => sw_fframe + sw_mol_frame => sw_mframe + sw_atom_frame => sw_aframe + -update MCF manual + [ver. 4.36 / 2019-02-11] -fix bug in draw atom,draw bond -delete size parameter atomfontsize diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/README b/Master/texmf-dist/doc/metapost/mcf2graph/README index b9ff96a713f..9297f9ef02b 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/README +++ b/Master/texmf-dist/doc/metapost/mcf2graph/README @@ -1,7 +1,7 @@ ******************************************************************************** mcf2graph : Convert Molecular Coding Format to graphics with METAFONT/METAPOST Author : Akira Yamaji - version : 4.36 2019-02-11 + version : 4.40 2019-03-21 E-mail : mcf2graph@gmail.com Located at : http://www.ctan.org/pkg/mcf2graph ******************************************************************************** diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf index 011668ba3da..d18c965ff88 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf @@ -1,11 +1,10 @@ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% Molecular Coding Format for mcf_example.tex by Akira Yamaji 2019.02.11 +% Molecular Coding Format for mcf_example.tex by Akira Yamaji 2019.03.10 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -input mcf2graph.mf; %%% it must be version 4.36 or later +input mcf2graph.mf; %%% it must be version 4.40 or later %------------------------------------------------------------------------- -font_wd:=33mm; -font_ht:=24mm; -max_bond_length:=4.5mm; +fsize:=(33mm,24mm); +max_blength:=4.5mm; %------------------------------------------------------------------------- sw_select:=1; %%%sw_aux_out:=1; @@ -30,153 +29,153 @@ var4:="cal_MW"; tag4:="cMW"; %%%% outputformat:="png"; hppp:=vppp:=0.1; outputtemplate:="%j-%3c.png"; %*************************************************************************** beginfont("EN:Acetamiprid","MW:222.676","FM:C10H11ClN4") - MCf(<30,Ph,2:N,1:/Cl,4:\,!,N,/_,!,/_,!!,N,!,CN) + MC(<30,Ph,2:N,1:/Cl,4:\,!,N,/_,!,/_,!!,N,!,CN) endfont %*************************************************************************** beginfont("EN:Imidacloprid","MW:255.662") - MCf(<30,Ph,1:N,6:/Cl,3:\,!,|,?5,2=dl,1:N,3:N,2:\,NH,!,NO2) + MC(<30,Ph,1:N,6:/Cl,3:\,!,|,?5,2=dl,1:N,3:N,2:\,NH,!,NO2) endfont %*************************************************************************** beginfont("EN:Thiamethoxam","MW:291.71") - MCf(<30,?6,{4,6}:N,2:O,6:/_,5:\\,N,!,NO2,4:\,!,|,?5,{1,3}=dl,3:N,5:S,4:/Cl) + MC(<30,?6,{4,6}:N,2:O,6:/_,5:\\,N,!,NO2,4:\,!,|,?5,{1,3}=dl,3:N,5:S,4:/Cl) endfont %*************************************************************************** beginfont("EN:Tebufenozide","MW:352.478") - MCf(<30,Ph,6:/!,3:\,//O,!,NH,!,N,/tBu,!,//O,!,|,Ph,{3,5}:/_) + MC(<30,Ph,6:/!,3:\,//O,!,NH,!,N,/tBu,!,//O,!,|,Ph,{3,5}:/_) endfont %*************************************************************************** beginfont("EN:Pyridaphenthion","MW:340.334") - MCf(<-30,!2,O,!,P,//S,/O!2^160>rl,!,O,!,|,?6,{1,5}=dl,{2,3}:N,4://O,3:/Ph) + MC(<-30,!2,O,!,P,//S,/O!2^160>rl,!,O,!,|,?6,{1,5}=dl,{2,3}:N,4://O,3:/Ph) endfont %*************************************************************************** beginfont("EN:Fenitrothion","MW:277.231") - MCf(<30,!,O,!,P,//S,/O!^160,!,O,!,|,Ph,3:/_,4:/NO2) + MC(<30,!,O,!,P,//S,/O!^160,!,O,!,|,Ph,3:/_,4:/NO2) endfont %*************************************************************************** beginfont("EN:Permethrin","MW:391.288") - MCf(<-30,?3,2^-35:*/_,2^35:/*_,1:\,!!,/Cl,!,Cl, + MC(<-30,?3,2^-35:*/_,2^35:/*_,1:\,!!,/Cl,!,Cl, 3:\,//O,!,O,!2,|,Ph,3:\,O,-60,Ph) endfont %*************************************************************************** beginfont("EN:Bensultap","MW:431.598") - MCf(<30,Ph,4:\,SOO,!,S,!2,N,/iPr,!2,S,!,SOO,!,Ph) + MC(<30,Ph,4:\,SOO,!,S,!2,N,/iPr,!2,S,!,SOO,!,Ph) endfont %*************************************************************************** beginfont("EN:Azoxystorbin","MW:403.394") - MCf(<30,Ph,2:/CN,3:\,O,!,|,Ph,{4,6}:N,3:\,O,!,|,Ph,2:\,/COO!,!!,!,O,!) + MC(<30,Ph,2:/CN,3:\,O,!,|,Ph,{4,6}:N,3:\,O,!,|,Ph,2:\,/COO!,!!,!,O,!) endfont %*************************************************************************** beginfont("EN:Isoprothiolane","MW:290.392") - MCf(<30,!,/_,!,O,!,//O,|,!2,//O,!,O,!,/_,!,2:\\,|,?5,{2,5}:S) + MC(<30,!,/_,!,O,!,//O,|,!2,//O,!,O,!,/_,!,2:\\,|,?5,{2,5}:S) endfont%*************************************************************************** beginfont("EN:Etridiazole","MW:247.518") - MCf(<18,?5,{1,3}=dl,{2,4}:N,5:S,1:/O!2,3:/CCl3) + MC(<18,?5,{1,3}=dl,{2,4}:N,5:S,1:/O!2,3:/CCl3) endfont %*************************************************************************** beginfont("EN:Oxine-Copper","MW:351.852") - MCf(Ph,4:N,5=Ph,-4:\,O,-60,<90,Cu,-90,O,60,|,Ph,5=Ph,10:N, + MC(Ph,4:N,5=Ph,-4:\,O,-60,<90,Cu,-90,O,60,|,Ph,5=Ph,10:N, ||,4:@,12~vf:#,23:@,12~vf:#) endfont %*************************************************************************** beginfont("EN:Captan","MW:300.578") - MCf(<12,?6,6=dl,3=?5,8:N,{7,9}://O,8:\,S,!,CCl3) + MC(<12,?6,6=dl,3=?5,8:N,{7,9}://O,8:\,S,!,CCl3) endfont %*************************************************************************** beginfont("EN:Chlorothalonil","MW:265.902") - MCf(<30,Ph,{1,2,4,6}:/Cl,{3,5}:/CN) + MC(<30,Ph,{1,2,4,6}:/Cl,{3,5}:/CN) endfont %*************************************************************************** beginfont("EN:Tetraconazole","MW:372.145") - MCf(<-6, + MC(<-6, ?5,{2,5}=dl,{1,2,4}:N,4:\,!3,O,!,/F^35,/F^-35,!,CF2, 7:\,|,Ph,{4,6}:/Cl) endfont %*************************************************************************** beginfont("EN:Endosulfan","MW:406.904"); - MCf(<26,?7,7=?6[13],11:@,208~wf`1.45,8~wb:#,10=d,{3,5}:O,4:S,4://O, + MC(<26,?7,7=?6[13],11:@,208~wf`1.45,8~wb:#,10=d,{3,5}:O,4:S,4://O, {8,9,10,11,12^-210,12^-150}:/Cl) endfont; %*************************************************************************** beginfont("EN:Flutolanil","MW:323.315") - MCf(<30,Ph,2:/CF3,3:\,//O,!,NH,!,|,Ph,6:/OiPr) + MC(<30,Ph,2:/CF3,3:\,//O,!,NH,!,|,Ph,6:/OiPr) endfont %*************************************************************************** beginfont("EN:Propiconazole","MW:342.22") - MCf(<-6,?5,{2,5}=dl,{1,3,4}:N, + MC(<-6,?5,{2,5}=dl,{1,3,4}:N, 4:\,!2,Ph,{-1,-3}:/Cl,7:@,|,?5,{1,4}:O,3:/!2^24) endfont %*************************************************************************** beginfont("EN:Pencycuron","MW:328.84") - MCf(<30,Ph,6:/Cl,3:\,!,N,/?5,!,//O,!,NH,!,Ph) + MC(<30,Ph,6:/Cl,3:\,!,N,/?5,!,//O,!,NH,!,Ph) endfont %*************************************************************************** beginfont("EN:Asulam","MW:230.238") - MCf(<30,Ph,6:/NH2,3:\,SOO,!,NH,!,//O,!,O,!) + MC(<30,Ph,6:/NH2,3:\,SOO,!,NH,!,//O,!,O,!) endfont %*************************************************************************** beginfont("EN:Oxadiargyl","MW:341.19") - MCf(<30,Ph,{1,3}:/Cl,4:\,|,?5,2=d,{1,2}:N,4:O,5://O,-3:/tBu,$6:\,O,!2,!!!) + MC(<30,Ph,{1,3}:/Cl,4:\,|,?5,2=d,{1,2}:N,4:O,5://O,-3:/tBu,$6:\,O,!2,!!!) endfont %*************************************************************************** beginfont("EN:Oxaziclomefone","MW:376.277") - MCf(<30,?6,6=dl,4:N,2:O,1:/_,5://O,6:/Ph,4:\,/_^35,/_^-35,!,|,Ph,{3,5}:/Cl) + MC(<30,?6,6=dl,4:N,2:O,1:/_,5://O,6:/Ph,4:\,/_^35,/_^-35,!,|,Ph,{3,5}:/Cl) endfont %*************************************************************************** beginfont("EN:Cafenstrole","MW:350.437") - MCf(<30,Ph,{2,4,6}:/_,3:\,SOO,!,|,?5,{2,5}=dl,{2,4,5}:N,4:\,//O,!,N,/!,!2) + MC(<30,Ph,{2,4,6}:/_,3:\,SOO,!,|,?5,{2,5}=dl,{2,4,5}:N,4:\,//O,!,N,/!,!2) endfont %*************************************************************************** beginfont("EN:Cyclosulfamuron","MW:421.428") - MCf(<30, + MC(<30, Ph,5:\,//O,!,?3,4:\,NH,!,SOO,!,NH,!,//O,!,NH,!,|,Ph,{2,6}:N,{3,5}:/O!) endfont %*************************************************************************** beginfont("EN:Napropamide","MW:271.36") - MCf(<-30,Ph,3=Ph,10:\,O,!,/_^35,/_^-35,!,//O,!,N,/!,!) + MC(<-30,Ph,3=Ph,10:\,O,!,/_^35,/_^-35,!,//O,!,N,/!,!) endfont %*************************************************************************** beginfont("EN:Pyributicarb","MW:330.446") - MCf(<30,Ph,5:/tBu,3:\,O,!,//S,!,N,/_,!,|,Ph,2:N,3:/O!) + MC(<30,Ph,5:/tBu,3:\,O,!,//S,!,N,/_,!,|,Ph,2:N,3:/O!) endfont %*************************************************************************** beginfont("EN:Propyzamide","MW:256.126") - MCf(<30,Ph,{1,5}:/Cl,3:\,//O,!,NH,!,/_^35,/_^-35,!,!!!) + MC(<30,Ph,{1,5}:/Cl,3:\,//O,!,NH,!,/_^35,/_^-35,!,!!!) endfont %*************************************************************************** beginfont("EN:Pendimethalin","MW:281.312") - MCf(<30,Ph,{1,2}:/_,{3,5}:/NO2,4:\,NH,!,/!,!2) + MC(<30,Ph,{1,2}:/_,{3,5}:/NO2,4:\,NH,!,/!,!2) endfont %*************************************************************************** beginfont("EN:Benfluralin","MW:335.283") - MCf(<30,Ph,{1,3}:/NO2,5:/CF3,2:\,N,/!,!4) + MC(<30,Ph,{1,3}:/NO2,5:/CF3,2:\,N,/!,!4) endfont %*************************************************************************** beginfont("EN:Trinexapac-ethyl","MW:252.266") - MCf(<30,?6,{2,4}://O,6:/COO!2,3:\\,/OH,!,?3) + MC(<30,?6,{2,4}://O,6:/COO!2,3:\\,/OH,!,?3) endfont %*************************************************************************** beginfont("EN:Buprofezin","MW:305.44") - MCf(<-30,?6,{1,5}:N,3:S,6://O,5:/iPr,4:\\,N,!,tBu,1:/Ph) + MC(<-30,?6,{1,5}:N,3:S,6://O,5:/iPr,4:\\,N,!,tBu,1:/Ph) endfont %*************************************************************************** beginfont("EN:Tricyclazole","MW:189.236") - MCf(<30,Ph,2:/_,|,-4=?5,1:N,3:S,|,-3=?5,{2,4}=dl,{2,3}:N) + MC(<30,Ph,2:/_,|,-4=?5,1:N,3:S,|,-3=?5,{2,4}=dl,{2,3}:N) endfont %*************************************************************************** beginfont("EN:Phthalide","MW:271.91") - MCf(<30,Ph,{1,2,5,6}:/Cl,|,-4=?5,2:O,3://O) + MC(<30,Ph,{1,2,5,6}:/Cl,|,-4=?5,2:O,3://O) endfont %*************************************************************************** beginfont("EN:Probenazole","MW:223.246") - MCf(<12,Ph,|,-4=?5,-2=dl,1:S,{1^35,1^-35}://O,2:N,3:\,O,!2,!!) + MC(<12,Ph,|,-4=?5,-2=dl,1:S,{1^35,1^-35}://O,2:N,3:\,O,!2,!!) endfont %*************************************************************************** beginfont("EN:Simetryn","MW:213.303") - MCf(<30,Ph,{2,4,6}:N,5:/S!,{1,3}:/NH!2) + MC(<30,Ph,{2,4,6}:N,5:/S!,{1,3}:/NH!2) endfont %*************************************************************************** beginfont("EN:Rifampicin","MW:822.94") - MCf(<30,Ph,6:/_^30,5:/OH,|,-6=?5,1:O,3://O,2:/*_^60, + MC(<30,Ph,6:/_^30,5:/OH,|,-6=?5,1:O,3://O,2:/*_^60, |,-8=?6,{2,4}=dl,{1,4}:/OH, |<=1,-2:\,NH,60,//O,-60,/_,60~dl,60,60~dl,-60, */_,60,/*OH,-60,/*_,60,/*OH,60,*/_^30,-60, @@ -185,34 +184,34 @@ beginfont("EN:Rifampicin","MW:822.94") endfont %*************************************************************************** beginfont("EN:Wortmannin","MW:428.43") - MCf(<30,?6,{-4,-2}=?6,-4=?5,(2,7)=?5[3], + MC(<30,?6,{-4,-2}=?6,-4=?5,(2,7)=?5[3], 6:O,1://O,{7,10}=dl,8://O,17://O,-3=d,-1:O, {4,12}:*/_^60,11:/*H^-60, $5:\*,60,O,!,$14:\*^-25,//O,!,O,!) endfont %*************************************************************************** beginfont("EN:Ampicillin","MW:349.405") - MCf(<45,?4,-3=?5,2:N,7:S, + MC(<45,?4,-3=?5,2:N,7:S, {3^45,4^-45}:/*H,1://O^15,5:/*COOH^-18,{6^35,6^-35}:/_, ,4:*\^75,NH,!,//O,!,/*NH2,!,Ph) endfont %*************************************************************************** beginfont("EN:Validamycin","MW:497.494") - MCf(<30,?6,{5,6}:/OH,3:\,-60,OH, + MC(<30,?6,{5,6}:/OH,3:\,-60,OH, $4:\,O,-60,|,?6,2:O,{3,4,5}:/OH,6:/!OH, $1:\,NH,!,|,?6,2=dl,{4,5,6}:/OH,3:/!OH) endfont %************************************************************************** beginfont("EN:Oceltamivir","MW:312.41") - MCf(<30,?6,3=d,1:/NH2,3:/COO!2,6:/NHCO!,5:\*,O,!,/!,!2) + MC(<30,?6,3=d,1:/NH2,3:/COO!2,6:/NHCO!,5:\*,O,!,/!,!2) endfont %*************************************************************************** beginfont("EN:Luciferin","MW:280.33") - MCf(<30,Ph,3=?5,8:\,?5,{9,16}=dl,{9,14}:N,{7,11}:S,1:/OH,-2:*/COOH) + MC(<30,Ph,3=?5,8:\,?5,{9,16}=dl,{9,14}:N,{7,11}:S,1:/OH,-2:*/COOH) endfont %*************************************************************************** beginfont("EN:Chlorophyll a","MW:893.509") -MCf(<54,|<=1,?5,{2,5}=dl,4:N,3:\,54~dl,|,?5,{2,4}=dl,5:N, +MC(<54,|<=1,?5,{2,5}=dl,4:N,3:\,54~dl,|,?5,{2,4}=dl,5:N, -2:\,54~dl,|,?5,2=d,5:N,-2:\~dl,54,|,?5,5=d,5:N,-2:\~dl,$5:#, -1:@,24,/*COO!^15,72,//O,$1:#,>|, {2,9,15,20~zf}:/_,8:/!,14:\,!!, @@ -221,133 +220,133 @@ MCf(<54,|<=1,?5,{2,5}=dl,4:N,3:\,54~dl,|,?5,{2,4}=dl,5:N, endfont %************************************************************************** beginfont("EN:Gibberellin A3","MW:346.379"); - MCf(<18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#,13=dl,6=wf,8=wb, + MC(<18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#,13=dl,6=wf,8=wb, 5:@,40~zf`1,O,50,//O^180,14~zb:#, 2:/COOH,7://_,13:*/OH,8:/*OH,14:*/_,{1,4}:*/H^60) endfont; %************************************************************************** beginfont("EN:Cholesterol","MW:386.664") - MCf(<30,?6,{-4,-2}=?6,-4=?5,7=dl, + MC(<30,?6,{-4,-2}=?6,-4=?5,7=dl, 1:*/OH,{4,12}:*/_^60, 10:/*H^180,{11,-1}:/*H^-60,9:*/H^60,-1:@,17,/*_,!4,/_,!) endfont %*************************************************************************** beginfont("EN:Lycorine","MW:287.315") - MCf(<30,Ph,-4=?6,-2=?6,6=?5,(9,12)=?5[3],13=dl,8:N,{15,17}:O, + MC(<30,Ph,-4=?6,-2=?6,6=?5,(9,12)=?5[3],13=dl,8:N,{15,17}:O, 9:/*H^180,10:*/H^60,13:*/OH,14:/*OH) endfont %************************************************************************** beginfont("EN:Tetrodotoxine","MW:319.27") - MCf(|<=1,<60,-90,60,-30`1.15,150,60,$1:#,$3:@,-135,60,-30`1.15,150,$4:#, + MC(|<=1,<60,-90,60,-30`1.15,150,60,$1:#,$3:@,-135,60,-30`1.15,150,$4:#, $10:\,O,60`1.33,60,$3~si_:#,$8:@,-15~si_,O,$12:#,>|, $9:@,45,-60,OH,1^120://NH, {5~zf^-15,7,9^-75,12,13~zf}:/OH,{2,6^180}:NH) endfont %*************************************************************************** beginfont("EN:beta-Carotene","MW:536.888") - MCf(<30,?6,3=dl,{3,5^35,5^-35}:/_, + MC(<30,?6,3=dl,{3,5^35,5^-35}:/_, 4:\,|,!18,{1,3,5,7,9,11,13,15,17}=dr,{3,7,12,16}:/_, |,?6,6=dl,{6,2^35,2^-35}:/_) endfont %************************************************************************** beginfont("EN:alfa-Tocopherol","MW:430.717") - MCf(<30,Ph,3=?6,7:O,{1,2,5}:/_,8:/*_^60,6:/OH,8:\,|,!12,{4,8}:/*_,12:/_) + MC(<30,Ph,3=?6,7:O,{1,2,5}:/_,8:/*_^60,6:/OH,8:\,|,!12,{4,8}:/*_,12:/_) endfont %************************************************************************** beginfont("EN:Quercetin","MW:302.24") - MCf(<30,Ph,3=?6,9:\,Ph,9=dl,10:O,7://O,{2,6,8,13,14}:/OH) + MC(<30,Ph,3=?6,9:\,Ph,9=dl,10:O,7://O,{2,6,8,13,14}:/OH) endfont %*************************************************************************** beginfont("EN:Limonin","MW:470.518") - MCf(<30,?6,{-3,-4}=?6,-5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, + MC(<30,?6,{-3,-4}=?6,-5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, {13,15,17,20}:O,{3,12,21}://O, {4~wf^60,8~zf^60,18^35,18^-35}:/_,{1^60,5^180,16^60}:/*H, 14:\*,|,?5,{1,4}=dl,3:O) endfont %************************************************************************** beginfont("EN:Cromolyn","MW:468.37") - MCf(<30,Ph,|,-1=?6,3=dl,1:O,4://O,2:/COOH, + MC(<30,Ph,|,-1=?6,3=dl,1:O,4://O,2:/COOH, $2:\,O,!2,/OH,!2,O,60,Ph,|,-5=?6,3=dl,4:O,1://O,3:/COOH) endfont %************************************************************************** beginfont("EN:Emetine","MW:480.649") - MCf(<30,Ph,{-4,-4}=?6, + MC(<30,Ph,{-4,-4}=?6, 8:N,{1,6}:/O!,-2:/*!,{7^-60,12^-60}:/*H, -3:\,!~zb,<-60,|,?6,5=d,2:NH,-6^-60:*/H,|,-2=?6,{2,4}=dl,{-2,-3}:/O!) endfont %*************************************************************************** beginfont("EN:Colchicine","MW:399.443") - MCf(<30,Ph,{1,2,6}:/O!,-4=?7,-5=?7,{-1,-4,-6}=dl,-2://O,-3:/O!, + MC(<30,Ph,{1,2,6}:/O!,-4=?7,-5=?7,{-1,-4,-6}=dl,-2://O,-3:/O!, 9:\,NH,!,//O,!) endfont %*************************************************************************** beginfont("EN:Caffeine","MW:194.194") - MCf(<30,?6,3=d,{2,6}:N,{2,6}:/_,{1,5}://O,|,-4=?5,2=dl,{1,3}:N,3:/_) + MC(<30,?6,3=d,{2,6}:N,{2,6}:/_,{1,5}://O,|,-4=?5,2=dl,{1,3}:N,3:/_) endfont %************************************************************************** beginfont("EN:Acronycine","MW:321.376") - MCf(<30,Ph,|,-4=?6,1:N,4://O,,1:/_,-3=Ph2,-1:/O!, + MC(<30,Ph,|,-4=?6,1:N,4://O,,1:/_,-3=Ph2,-1:/O!, |,-4=?6,2=d,4:O,-2^-35:/_,-2^35:/_) endfont %*************************************************************************** beginfont("EN:Ibotenic acid","MW:158.113") - MCf(<18,?5,4=d,3:O,2:NH,1://O,4:@,-24,/NH2,!,COOH) + MC(<18,?5,4=d,3:O,2:NH,1://O,4:@,-24,/NH2,!,COOH) endfont %************************************************************************** beginfont("EN:Piperine","MW:285.343") - MCf(<30,Ph,|,-1=?5,{1,3}:O,$4:\,!!,!,!!,!,//O,!,|,?6,1:N) + MC(<30,Ph,|,-1=?5,{1,3}:O,$4:\,!!,!,!!,!,//O,!,|,?6,1:N) endfont %*************************************************************************** beginfont("EN:Febrifugine","MW:301.346") - MCf(<30,Ph,|,-4=?6,2=d,{1,3}:N,4://O,$9:\,!,//O,!,!~zf,|,?6,2:NH,-1:*/OH) + MC(<30,Ph,|,-4=?6,2=d,{1,3}:N,4://O,$9:\,!,//O,!,!~zf,|,?6,2:NH,-1:*/OH) endfont %*************************************************************************** beginfont("EN:Mitomycine C","MW:334.332") - MCf(<30,?6,{3,6}=dl,{2,5}://O,1:/_,|,-4=?5,1:N, + MC(<30,?6,{3,6}=dl,{2,5}://O,1:/_,|,-4=?5,1:N, $6:/NH2,|,-3=?5,|,-2=?3,-1=wb,-2=wf,-1:NH, $8:/*O!^35,$9:@,17.9`1,!,O,!,//O,!,NH2) endfont %*************************************************************************** beginfont("EN:Podophyllotoxin","MW:414.41"); - MCf(<0,?5,{2,5}:O,-3=Ph2,-3=?6,-3=?5,-2:O,-1=wb,-3://O, + MC(<0,?5,{2,5}:O,-3=Ph2,-3=?6,-3=?5,-2:O,-1=wb,-3://O, 10:\*,Ph,{-2,-3,-4}:/O!,$13:/*OH,{$11~wf^-60,$12~zf^60}:/H) endfont; %*************************************************************************** beginfont("EN:Warfarin","MW:308.333"); - MCf(<30,Ph,3=?6,8=dl,10:O,7:/OH,9://O,8:\,/Ph`1,60,!,//O,!) + MC(<30,Ph,3=?6,8=dl,10:O,7:/OH,9://O,8:\,/Ph`1,60,!,//O,!) endfont; %*************************************************************************** beginfont("EN:Genistein","MW:270.24"); - MCf(<30,Ph,3=?6,9=dl,10:O,{2,6}:/OH,7://O,8:\,Ph,-3:/OH) + MC(<30,Ph,3=?6,9=dl,10:O,{2,6}:/OH,7://O,8:\,Ph,-3:/OH) endfont; %*************************************************************************** beginfont("EN:Baicalein","MW:270.24"); - MCf(<30,Ph,3=?6,9=dl,10:O,{1,2,6}:/OH,7://O,8:\,Ph) + MC(<30,Ph,3=?6,9=dl,10:O,{1,2,6}:/OH,7://O,8:\,Ph) endfont; %*************************************************************************** beginfont("EN:Reserpine","MW:608.688"); - MCf(<54,Ph,-4=?5,-2=?6,-4=?6,-3=?6,9=dl,11:N,7:NH,10:*/H^-60, + MC(<54,Ph,-4=?5,-2=?6,-4=?6,-3=?6,9=dl,11:N,7:NH,10:*/H^-60, {15^-60,16^60}:/*H, $20:*\,O,!,//O,!,|,Ph,{-2,-3,-4}:/O!,{$1,$19~zf>rl}:/O!, $18:*\,//O,!,O,!) endfont; %*************************************************************************** beginfont("EN:Nicotine","MW:162.23"); - MCf(<30,Ph,2:N,4:\,|,?5,2:N,2:/_) + MC(<30,Ph,2:N,4:\,|,?5,2:N,2:/_) endfont; %*************************************************************************** beginfont("EN:Rotenone","MW:394.423"); - MCf(<-60,?5,{-3,-2,-3,-4}=?6,{7,9,-2,-4}=dl,{3,17}=dr, + MC(<-60,?5,{-3,-2,-3,-4}=?6,{7,9,-2,-4}=dl,{3,17}=dr, {2,13,16}:O,10://O,{11^-60,12^60}:*/H,{-2,-3}:/O!,1:*\,/_,!!) endfont; %*************************************************************************** beginfont("EN:Pyrethrin I","MW:328.452"); - MCf(<30,?3,{3^35~wf,3^-35~zf}:/_,1:*\,!!,iPr, + MC(<30,?3,{3^35~wf,3^-35~zf}:/_,1:*\,!!,iPr, 2:\*,//O,!,O,-36~zb,|,?5,-2=d,-1:/_,-3://O,-2:\,!4,{-1,-3}=dl) endfont; %*************************************************************************** beginfont("EN:Erythromycin","MW:733.937"); -MCf(<30,|<=1,<-120,60,60,60,-60,60,60,-60,60,60,60,-60,60,60,>|,1:#, +MC(<30,|<=1,<-120,60,60,60,-60,60,60,-60,60,60,60,-60,60,60,>|,1:#, 14:O,13:/*!,{1,9}://O,{2,10}:*/_,{4,6^-35,8,12^35}:/*_, {6^35,11,12^-35}:*/OH, $3:\*,O,30,|,?6`.7,2:O,{3,5^35}:/_,4:/OH,5^-35:/O!, @@ -355,91 +354,40 @@ MCf(<30,|<=1,<-120,60,60,60,-60,60,60,-60,60,60,60,-60,60,60,>|,1:#, endfont; %************************************************************************** beginfont("EN:Paclitaxel","MW:853.918") - MCf(?6,5=d,3:@,|<=1,36,45,45,45,45,>|,$5:#,-4=?6,-4=?4,||,-1=wb,-3=wf,-1:O, + MC(?6,5=d,3:@,|<=1,36,45,45,45,45,>|,$5:#,-4=?6,-4=?4,||,-1=wb,-3=wf,-1:O, {4^35,4^-35,6}:/_,{3^-60,15}:*/OH,8:/*H^-60,9:*/_^60,10://O, $1:\,O,!,//O,!,*/OH,!,/Ph,60~wf,NH,-60,//O,60,Ph, $7:\*,O,-45,//O,60,Ph,$11:*\,O,-60,//O,60,$12:\*^-15,O,60,//O,-60) endfont %************************************************************************** beginfont("EN:Mevastatin","MW:390.52") - MCf(<30,?6,2=d,4:*/H^60,|,-4=?6,2=d,$9:*/_, + MC(<30,?6,2=d,4:*/H^60,|,-4=?6,2=d,$9:*/_, $10:*\,!,60~wb,|,?6,6:O,-2://O,-4:/*OH,$5:\*,O,60,//O,!,*/_,!2) endfont %*************************************************************************** beginfont("EN:Sesamine","MW:354.35") - MCf(<54,?5,1=?5,{4,7}:O,{1^-54,2^54}:*/H, + MC(<54,?5,1=?5,{4,7}:O,{1^-54,2^54}:*/H, $5:*\^-12,Ph,|,-3=?5,{-1,-3}:O,$8:*\^-12,Ph,|,-3=?5,{-1,-3}:O) endfont %************************************************************************** beginfont("EN:Morphine","MW:285.343") - MCf(<30,Ph,2=?6,-4=?6,(1,12)=?5[2],-1:O,-1=zb, + MC(<30,Ph,2=?6,-4=?6,(1,12)=?5[2],-1:O,-1=zb, 7:@,60~wf`0.75,70~si_`1.3,45,N,/_,9~wb:#, 15=d,6:/OH,8^180:*/H,12:/*OH) endfont %************************************************************************** beginfont("EN:Capsaicin","MW:305.418") - MCf(<30,Ph,1:/OH,6:/O!,4:\,!,NH,!,//O,|,!8,-3=d,-1:/_) + MC(<30,Ph,1:/OH,6:/O!,4:\,!,NH,!,//O,|,!8,-3=d,-1:/_) endfont %*************************************************************************** beginfont("EN:Quinine","MW:324.424") - MCf(<30,Ph,3=Ph,7:N,6:/O!, + MC(<30,Ph,3=Ph,7:N,6:/O!, 10:\,*/OH,/H~zf^-60,!,|,?6,2:N,1:*/H^60,4:*\,!!,2:@,165~zf,60,5~zb:#) endfont %*************************************************************************** beginfont("EN:Atoropin","MW:289.375") - MCf(<-30,O,!,//O,!,!,Ph, + MC(<-30,O,!,//O,!,!,Ph, $1:\~zb^-120,|,?7`1.1,6:*\^190`1.25,N,/_,3~wb:#,$3:/!OH~wv) endfont %*************************************************************************** bye -ye -************************************ -beginfont("EN:Atoropin","MW:289.375") - MCf(<-30,O,!,//O,!,!,Ph, - $1:\~zb^-120,|,?7`1.1,6:*\^190`1.25,N,/_,3~wb:#,$3:/!OH~wv) -endfont -%*************************************************************************** -bye -ye - - -ye -ye -************************************ -beginfont("EN:Atoropin","MW:289.375") - MCf(<-30,O,!,//O,!,!,Ph, - $1:\~zb^-120,|,?7`1.1,6:*\^190`1.25,N,/_,3~wb:#,$3:/!OH~wv) -endfont -%*************************************************************************** -bye -ye - - -e - - -************************************************************* -bye -ye - - -ye -ye -************************************ -beginfont("EN:Atoropin","MW:289.375") - MCf(<-30,O,!,//O,!,!,Ph, - $1:\~zb^-120,|,?7`1.1,6:*\^190`1.25,N,/_,3~wb:#,$3:/!OH~wv) -endfont -%*************************************************************************** -bye -ye - - -e - - - - - - - diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf Binary files differindex 3e0a313467f..0fc7eccc3e7 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.tex index f9c464242f4..d94488e02ff 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.tex +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.tex @@ -1,5 +1,5 @@ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% Example of MCF typeset by LaTeX mcf_examples.tex by A.Yamaji 2019.02.11 +% Example of MCF typeset by LaTeX mcf_examples.tex by A.Yamaji 2019.02.24 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% \documentclass[a4paper]{article} \usepackage{graphicx} diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps index 2f03752d441..e5ba95a90bd 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps @@ -1,8 +1,8 @@ %!PS-Adobe-3.0 EPSF-3.0 -%%BoundingBox: -1 -1 212 57 -%%HiResBoundingBox: -0.1 -0.1 211.90326 56.58087 +%%BoundingBox: -1 -1 213 57 +%%HiResBoundingBox: -0.1 -0.1 212.69804 56.79282 %%Creator: MetaPost 2.00 -%%CreationDate: 2019.02.11:0917 +%%CreationDate: 2019.03.17:0708 %%Pages: 1 %%DocumentResources: procset mpost-minimal %%+ font ICXWUR-CMTT10 ICXWUR-CMR8 @@ -604,26 +604,6 @@ cleartomark /cmr8 /GMTUEE-CMR8 def %%EndSetup %%Page: 1 1 - 0 0 0 setrgbcolor -newpath -0.1 0.1 moveto --0.1 -0.1 lineto -0.1 -0.1 lineto -211.90326 -0.1 lineto -211.90326 0.1 lineto -211.90326 56.58087 lineto -211.70325 56.58087 lineto --0.1 56.58087 lineto --0.1 56.38086 lineto --0.1 -0.1 lineto -0.1 -0.1 lineto -0.1 0.1 lineto -0.1 56.58087 lineto -0.1 56.38086 lineto -211.90326 56.38086 lineto -211.70325 56.38086 lineto -211.70325 -0.1 lineto -211.70325 0.1 lineto - closepath fill 1 0 0 setrgbcolor newpath 54.2302 6.07826 moveto 54.98193 6.07826 lineto @@ -760,5 +740,24 @@ newpath 171.07841 19.72816 moveto 181.94542 13.45413 lineto stroke 101.92107 45.71011 moveto (\(cmr8\)) cmtt10 9.96265 fshow +newpath -0.1 0.1 moveto +-0.1 -0.1 lineto +0.1 -0.1 lineto +212.69804 -0.1 lineto +212.69804 0.1 lineto +212.69804 56.79282 lineto +212.49803 56.79282 lineto +-0.1 56.79282 lineto +-0.1 56.5928 lineto +-0.1 -0.1 lineto +0.1 -0.1 lineto +0.1 0.1 lineto +0.1 56.79282 lineto +0.1 56.5928 lineto +212.69804 56.5928 lineto +212.49803 56.5928 lineto +212.49803 -0.1 lineto +212.49803 0.1 lineto + closepath fill showpage %%EOF diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf index 89614a5c4b9..d9fd8811323 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf @@ -1,117 +1,112 @@ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% Molecular Coding Format file for mcf_manual.tex by Akira.Yamaji 2019.02.11 +% Molecular Coding Format file for mcf_manual.tex by Akira.Yamaji 2019.03.10 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -input mcf2graph.mf; %% it must be version 4.36 or later +input mcf2graph.mf; %% it must be version 4.40 or later %------------------------------------------------------------------------ -sw_mol_frame:=0; +sw_mframe:=0; sw_expand:=0; -sw_solid:=2; %%%%sw_aux_out:=0; %%%%%sw_arrow:=1; %%%%%sw_rep_out:=1; %*********************************************************************** -font_wd:=35mm; -font_ht:=25mm; -bond_len:=6mm; +fsize:=(35mm,25mm); +blength:=6mm; %*********************************************************************** beginfont("EN:Glycine") - MCf(<30,NH2,!0,!,COOH) + MC(<30,NH2,!0,!,COOH) endfont %*********************************************************************** beginfont("EN:Alanine") - MCf(<30,NH2,!0,/_,!,COOH) + MC(<30,NH2,!0,/_,!,COOH) endfont %*********************************************************************** beginfont("EN:Valine") - MCf(<30,NH2,!0,/iPr,!,COOH) + MC(<30,NH2,!0,/iPr,!,COOH) endfont %*********************************************************************** beginfont("EN:Leucine") - MCf(<30,NH2,!0,!,COOH,2:\,!,/_,!) + MC(<30,NH2,!0,!,COOH,2:\,!,/_,!) endfont %*********************************************************************** beginfont("EN:Isoleucine") - MCf(<30,NH2,!0,!,COOH,2:\,/_,!2) + MC(<30,NH2,!0,!,COOH,2:\,/_,!2) endfont %*********************************************************************** beginfont("EN:Serine") - MCf(<30,NH2,!0,!,COOH,2:/!OH) + MC(<30,NH2,!0,!,COOH,2:/!OH) endfont %*********************************************************************** beginfont("EN:Threonine") - MCf(<30,NH2,!0,!,COOH,2:\,/_,!,OH) + MC(<30,NH2,!0,!,COOH,2:\,/_,!,OH) endfont %*********************************************************************** beginfont("EN:Cysteine") - MCf(<30,NH2,!0,!,COOH,2:/!SH) + MC(<30,NH2,!0,!,COOH,2:/!SH) endfont %*********************************************************************** beginfont("EN:Methionine") - MCf(<30,NH2,!0,!,COOH,2:\,!2,SMe) + MC(<30,NH2,!0,!,COOH,2:\,!2,SMe) endfont %*********************************************************************** beginfont("EN:Phenylalanine") - MCf(<30,NH2,!0,!,COOH,2:/!Ph) + MC(<30,NH2,!0,!,COOH,2:/!Ph) endfont %*********************************************************************** beginfont("EN:Tyrosine") - MCf(<30,NH2,!0,!,COOH,2:\,!,Ph,-3:/OH) + MC(<30,NH2,!0,!,COOH,2:\,!,Ph,-3:/OH) endfont %*********************************************************************** beginfont("EN:Triptophan") - MCf(<30,NH2,!0,!,COOH,2:\,!,<24,|,?5,-4=Ph,2=dr,5=dl,4:NH) + MC(<30,NH2,!0,!,COOH,2:\,!,<24,|,?5,-4=Ph,2=dr,5=dl,4:NH) endfont %*********************************************************************** beginfont("EN:Prorine") - MCf(<18,?5,3:NH,4:/COOH) + MC(<18,?5,3:NH,4:/COOH) endfont %*********************************************************************** beginfont("EN:Glutamine") - MCf(<30,NH2,!0,!,COOH,2:\`1,-45,-45,//O,!,NH2) + MC(<30,NH2,!0,!,COOH,2:\`1,-45,-45,//O,!,NH2) endfont %*********************************************************************** beginfont("EN:Asparagine") - MCf(<30,NH2,!0,!,COOH,2:\,!,//O,!,NH2) + MC(<30,NH2,!0,!,COOH,2:\,!,//O,!,NH2) endfont %*********************************************************************** beginfont("EN:Aspartic acid") - MCf(<30,NH2,!0,/!COOH,!,COOH) + MC(<30,NH2,!0,/!COOH,!,COOH) endfont %*********************************************************************** beginfont("EN:Glutamic acid") - MCf(<30,NH2,!0,!,COOH,2:\,!2,COOH) + MC(<30,NH2,!0,!,COOH,2:\,!2,COOH) endfont %*********************************************************************** beginfont("EN:Lysine") - MCf(<30,NH2,!0,!,COOH,2:\,!4,NH2) + MC(<30,NH2,!0,!,COOH,2:\,!4,NH2) endfont %*********************************************************************** beginfont("EN:Arginine") - MCf(<30,NH2,!0,!,COOH,2:\,-45,-45,60,NH,!,//NH,!,NH2) + MC(<30,NH2,!0,!,COOH,2:\,-45,-45,60,NH,!,//NH,!,NH2) endfont %*********************************************************************** beginfont("EN:Hystidine") - MCf(<30,NH2,!0,!,COOH,2:\,!,|,?5,{1,3}=dl,3:N,5:NH) + MC(<30,NH2,!0,!,COOH,2:\,!,|,?5,{1,3}=dl,3:N,5:NH) endfont %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -font_wd:=60mm; -font_ht:=35mm; -bond_len:=8mm; -max_bond_length:=10mm; +fsize:=(60mm,35mm); +blength:=0mm; +max_blength:=10mm; ratio_thickness_bond:=0.015; ratio_atom_bond:=0.36; -sw_solid:=0; -sw_font_frame:=1; -margin_left_right:=2mm; -margin_top_bottom:=1mm; +sw_fframe:=1; +fmargin:=(2mm,1mm); %*********************************************************************** beginfont("EN:Chain 1") - font_ht:=20mm; + fsize:=(60mm,20mm); sw_numberB:=1; numberB_end:=6; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<10,-30,45,-45,30,-30,60, + MC(<10,-30,45,-45,30,-30,60, {1^-75,2^67.5,3^-60,4^75,5^-75,6^60}:/_~dt ) ext( @@ -133,12 +128,12 @@ beginfont("EN:Chain 1") endfont %*********************************************************************** beginfont("EN:Chain 2") - font_ht:=20mm; + fsize:=(60mm,20mm); sw_numberB:=1; numberB_end:=6; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<30,!6, + MC(<30,!6, {1^-60,2^60,3^-60,4^60,5^-60,6^60}:/_~dt ) ext( @@ -160,76 +155,76 @@ beginfont("EN:Chain 2") endfont %*********************************************************************** beginfont("EN:Jump and Branch") - font_ht:=20mm; - margin_top_bottom:=2mm; - sw_clip:=1; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); + sw_trimming:=1; sw_numberA:=1; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<30,!6,3:@,0,!,5:@,-30) + MC(<30,!6,3:@,0,!,5:@,-30) endfont %*********************************************************************** beginfont("EN:Jump and Branch") - font_ht:=20mm; - margin_top_bottom:=2mm; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); sw_numberA:=1; - sw_clip:=1; + sw_trimming:=1; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<30,!6,3:\,!) + MC(<30,!6,3:\,!) endfont %*********************************************************************** beginfont("EN:branch1") - font_ht:=20mm; - margin_top_bottom:=2mm; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); sw_numberA:=1; - sw_clip:=1; + sw_trimming:=1; numberA_end:=10; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<-30,!10,2:\,!,4:*\,!,6:\*,!,8:\\,!,10:*\*,!) + MC(<-30,!10,2:\,!,4:*\,!,6:\*,!,8:\\,!,10:*\*,!) endfont %*********************************************************************** beginfont("EN:branch2") - font_ht:=20mm; - margin_top_bottom:=2mm; - sw_clip:=1; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); + sw_trimming:=1; sw_numberA:=1; numberA_end:=7; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<-30,!6,2:\~dr,!,4:\`1.5,-90,6:@,15,-60) + MC(<-30,!6,2:\~dr,!,4:\`1.5,-90,6:@,15,-60) endfont %*********************************************************************** beginfont("EN:Connect atom") - font_ht:=20mm; - margin_top_bottom:=2mm; - sw_clip:=1; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); + sw_trimming:=1; sw_numberA:=1; ratio_chain_ring:=1; %---------------------------------------------------------------------- - MCf(<30,!6,3:\,!,5~bd:#) + MC(<30,!6,3:\,!,5~bd:#) endfont %*********************************************************************** beginfont("EN:ring") - font_ht:=20mm; - sw_clip:=1; - margin_top_bottom:=3mm; + fsize:=(60mm,20mm); + sw_trimming:=1; + fmargin:=(2mm,3mm); sw_numberB:=1; %---------------------------------------------------------------------- - MCf(?6) + MC(?6) endfont %*********************************************************************** beginfont("EN:rotate 1") - font_ht:=20mm; - margin_top_bottom:=3mm; - sw_clip:=1; + fsize:=(60mm,20mm); + fmargin:=(2mm,3mm); + sw_trimming:=1; sw_numberB:=1; ratio_chain_ring:=1; numberB_end:=5; defaultscale:=0.5; labeloffset:=2bp; - MCf(``1,0,0,<90,0,<-90,0,0,{1,2,3,4,5}=vf, + MC(``1,0,0,<90,0,<-90,0,0,{1,2,3,4,5}=vf, {3,4^180}:/_~dt) ext( drawarrow .7[B6s,B6e]{dir(B6dir+90)}..{dir(B3dir+90)}.7[B3s,B3e]; @@ -240,728 +235,760 @@ beginfont("EN:rotate 1") endfont %*********************************************************************** beginfont("EN:change bond 1") - font_wd:=70mm; - font_ht:=12mm; - bond_len:=8mm; - sw_clip:=1; + fsize:=(70mm,12mm); + fmargin:=(2mm,3mm); + blength:=8mm; + sw_trimming:=1; ratio_chain_ring:=1; - margin_top_bottom:=3mm; - MCf(<30,!~dm,!,!~dl,!,!~dr,!~db,!~db,!,!~tm) + MC(<30,!~dm,!,!~dl,!,!~dr,!~db,!~db,!,!~tm) endfont %*********************************************************************** beginfont("EN:change bond 2") - font_ht:=12mm; - bond_len:=8mm; - margin_top_bottom:=3mm; - sw_clip:=1; + fsize:=(60mm,12mm); + fmargin:=(2mm,3mm); + blength:=9.5mm; + sw_trimming:=1; ratio_chain_ring:=1; - MCf(<30,!~wf,!,!~wb,!,!~zf,!,!~zb) + MC(<30,!~wf,!,!~wb,!,!~zf,!,!~zb) endfont %*********************************************************************** beginfont("EN:change bond 3") - font_ht:=12mm; - bond_len:=8mm; - margin_top_bottom:=3mm; - sw_clip:=1; + fsize:=(70mm,12mm); + fmargin:=(2mm,3mm); + blength:=10mm; + sw_trimming:=1; ratio_chain_ring:=1; - MCf(<30,!~vf,!,!~vb) + MC(<30,!~vf,!,!~vb) endfont %*********************************************************************** beginfont("EN:change bond 3") - font_ht:=12mm; - bond_len:=8mm; - sw_clip:=1; + fsize:=(70mm,12mm); + fmargin:=(2mm,3mm); + blength:=9mm; + sw_trimming:=1; ratio_chain_ring:=1; - margin_top_bottom:=3mm; - MCf(<30,!7,1=dt,3=wv,5=bd,7=bz) + MC(<30,!7,1=dt,3=wv,5=bd,7=bz) endfont %*********************************************************************** beginfont("EN:change bond 4") - font_ht:=12mm; - bond_len:=8mm; - margin_top_bottom:=3mm; - sw_clip:=1; + fsize:=(60mm,12mm); + fmargin:=(2mm,3mm); + blength:=9mm; + sw_trimming:=1; ratio_chain_ring:=1; - MCf(<30,!7,{2,4,6}=dr) + MC(<30,!7,{2,4,6}=dr) endfont %*********************************************************************** beginfont("EN:over line") - sw_clip:=1; - font_ht:=20mm; + sw_trimming:=1; + fsize:=(60mm,20mm); ratio_chain_ring:=1; - MCf(<-30,!8,!,60,90`8,{2~si_,4~wf_,6~wb_,8~bd_}:/_`2) + MC(<-30,!8,!,60,90`8,{2~si_,4~wf_,6~wb_,8~bd_}:/_`2) endfont %*********************************************************************** beginfont("EN:change bond length1") - font_ht:=12mm; + fsize:=(60mm,12mm); sw_numberB:=1; - MCf(<30,!2,!2`1.2,!2) + MC(<30,!2,!2`1.2,!2) endfont %*********************************************************************** beginfont("EN:change bond length2") - font_ht:=12mm; + fsize:=(60mm,12mm); sw_numberB:=1; - MCf(<30,!2,``1.2,!4) + MC(<30,!2,``1.2,!4) endfont %*********************************************************************** beginfont("EN:change ring length") - margin_top_bottom:=2mm; - font_ht:=20mm; - sw_clip:=1; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); + sw_trimming:=1; sw_numberB:=1; - MCf(?6,4:\,?6`1.2) + MC(?6,4:\,?6`1.2) endfont %*********************************************************************** beginfont("EN:Insert atom") - font_wd:=70mm; - font_ht:=12mm; - MCf(<30,!2,O,!2,N,!2) + sw_trimming:=1; + fsize:=(70mm,12mm); + MC(<30,!2,O,!2,N,!2) endfont %*********************************************************************** beginfont("EN:change atom") - font_wd:=70mm; - font_ht:=10mm; - MCa(0,0.5)(<-30,!4,2:O,{3,4}:N) + fsize:=(70mm,10mm); + MCat(0,0.5)(<-30,!4,2:O,{3,4}:N) sw_numberA:=1; - MCa(1,0.5)(<-30,!4,2:O,{3,4}:N) + MCat(1,0.5)(<-30,!4,2:O,{3,4}:N) endfont %*********************************************************************** beginfont("EN:change atom brock address 1") - font_wd:=70mm; - font_ht:=15mm; - MCa(0,.5)(?6,4:\,|,?6,2:O) + fsize:=(70mm,15mm); + MCat(0,.5)(?6,4:\,|,?6,2:O) sw_numberA:=1; - MCd(1,.88)(1,.5)(?6,4:\,?6) + msize:=(1,.88); + MCat(1,.5)(?6,4:\,?6) endfont %*********************************************************************** beginfont("EN:change atom brock address 2") - font_wd:=70mm; - font_ht:=15mm; - MCa(0,.5)(?6,4:\,|,?6,||,2:N) + fsize:=(70mm,15mm); + MCat(0,.5)(?6,4:\,|,?6,||,2:N) sw_numberA:=1; - MCd(1,.88)(1,.5)(?6,4:\,?6) + msize:=(1,.88); + MCat(1,.5)(?6,4:\,?6) endfont %*********************************************************************** beginfont("EN:change atom absolute address") - font_wd:=70mm; - font_ht:=15mm; - MCa(0,.5)(?6,4:\,?6,$2:N) + fsize:=(70mm,15mm); + MCat(0,.5)(?6,4:\,?6,$2:N) sw_numberA:=1; - MCd(1,.88)(1,.5)(?6,4:\,?6) + msize:=(1,.88); + MCat(1,.5)(?6,4:\,?6) endfont %*********************************************************************** beginfont("EN:change atom relative adress") - font_wd:=70mm; - font_ht:=15mm; - MCa(0,.5)(?6,4:\,?6,-2:N) + fsize:=(70mm,15mm); + MCat(0,.5)(?6,4:\,?6,-2:N) sw_numberA:=3; - MCd(1,.88)(1,.5)(?6,4:\,?6) + msize:=(1,.88); + MCat(1,.5)(?6,4:\,?6) endfont %*********************************************************************** beginfont("EN:Charged atom") - sw_clip:=1; - font_wd:=60mm; - font_ht:=15mm; - MCf(<-30,!2,N[1],!2,O[-1],!2,&"-",!2,N,&"+"^180,!) + sw_trimming:=1; + fsize:=(60mm,15mm); + MC(<-30,!2,N[1],!2,O[-1],!2,&"-",!2,N,&"+"^180,!) endfont %*********************************************************************** beginfont("EN:fused ring") - font_ht:=18mm; - margin_top_bottom:=1.5mm; - sw_clip:=1; + fsize:=(60mm,18mm); + fmargin:=(2mm,1.5mm); + sw_trimming:=1; sw_numberB:=1; - MCf(<30,?6,3=?6,3=dt,{7,8,9,10,11}=bd) + MC(<30,?6,3=?6,3=dt,{7,8,9,10,11}=bd) endfont %----------------------------------------------------------------------- beginfont("EN:change ring length") - margin_top_bottom:=2mm; - font_ht:=25mm; - sw_clip:=1; + fsize:=(60mm,25mm); + fmargin:=(2mm,2mm); + sw_trimming:=1; sw_numberB:=1; - MCf(?6,4:\,?6`1.2,5=?6,11=?6, + MC(?6,4:\,?6`1.2,5=?6,11=?6, {14,15,16,17,18,19,20,21,22,23}=bd,{5,11}=dt) endfont %----------------------------------------------------------------------- beginfont("EN:fused large 6 ring") - font_ht:=18mm; + fsize:=(60mm,18mm); + fmargin:=(2mm,1.5mm); margin_top_bottom:=1.5mm; sw_numberB:=1; - sw_clip:=1; - MCf(<30,?6,3=?6[13],3=dt,{7,8,9,10,11}=bd) + sw_trimming:=1; + MC(<30,?6,3=?6[13],3=dt,{7,8,9,10,11}=bd) endfont %----------------------------------------------------------------------- beginfont("EN:fuse multi ring") - font_wd:=70mm; - font_ht:=20mm; + fsize:=(70mm,20mm); sw_numberB:=1; - sw_clip:=1; - MCf(<30,?6,{-3,-4,-4,-2,-2,-4,-4}=?6,{4,8,13,20,25,28,33}=dt) + sw_trimming:=1; + MC(<30,?6,{-3,-4,-4,-2,-2,-4,-4}=?6,{4,8,13,20,25,28,33}=dt) endfont %*********************************************************************** beginfont("EN:fused ring 2") - font_wd:=75mm; - font_ht:=20mm; + fsize:=(75mm,20mm); sw_numberB:=1; - MCa( 0,.5)(<30,?6,3=?6,(11,4)=?6[4],{11,4}=dt,{12,13,14,15}=bd) - MCd(1,.9)(.5,.5)(<30,?6,3=?6,(11,4)=?5[3],{11,4}=dt,{12,13,14}=bd) - MCd(1,.9)( 1,.5)(<30,?6,3=?6,(11,4)=?4[2],{11,4}=dt,{12,13}=bd) + MCat( 0,.5)(<30,?6,3=?6,(11,4)=?6[4],{11,4}=dt,{12,13,14,15}=bd) + msize:=(1,.9); MCat(.5,.5)(<30,?6,3=?6,(11,4)=?5[3],{11,4}=dt,{12,13,14}=bd) + msize:=(1,.9); MCat( 1,.5)(<30,?6,3=?6,(11,4)=?4[2],{11,4}=dt,{12,13}=bd) endfont %*********************************************************************** beginfont("EN:fused ring 3") - font_ht:=20mm; - margin_top_bottom:=2mm; + fsize:=(60mm,20mm); + fmargin:=(2mm,2mm); sw_numberB:=1; - MCa(0,1)(?6,{3,10}=?6,(16,4)=?6[3],{16,4}=dt,{17,18,19}=bd) - MCa(1,0)(?6,{3,10}=?6,(16,4)=?5[2],{16,4}=dt,{17,18}=bd) + MCat(0,1)(?6,{3,10}=?6,(16,4)=?6[3],{16,4}=dt,{17,18,19}=bd) + MCat(1,0)(?6,{3,10}=?6,(16,4)=?5[2],{16,4}=dt,{17,18}=bd) endfont %*********************************************************************** beginfont("EN:fused ring 4") - sw_clip:=1; - font_ht:=22mm; - margin_top_bottom:=2mm; + fsize:=(60mm,22mm); + fmargin:=(2mm,2mm); + sw_trimming:=1; sw_numberB:=1; - MCf(<-30,?6,{3,10,15}=?6,(21,4)=?6[2],{21,4}=dt,{22,23}=bd) + MC(<-30,?6,{3,10,15}=?6,(21,4)=?6[2],{21,4}=dt,{22,23}=bd) endfont %*********************************************************************** beginfont("EN:Spiro ring ") - sw_clip:=1; - font_ht:=18mm; - margin_top_bottom:=3mm; + sw_trimming:=1; + fsize:=(60mm,18mm); + fmargin:=(2mm,3mm); sw_numberA:=1; numberA_end:=7; ratio_chain_ring:=1; - MCf(<30,!6,4:@,?5) + MC(<30,!6,4:@,?5) endfont %*********************************************************************** beginfont("EN:substituent 1") - font_ht:=25mm; - sw_clip:=1; - MCf(<30,!,/_,!,/!,!3,/!2,!,/iPr,!3,/tBu,!,/Ph^-30,!) + fsize:=(60mm,25mm); + sw_trimming:=1; + MC(<30,!,/_,!,/!,!3,/!2,!,/iPr,!3,/tBu,!,/Ph^-30,!) endfont %*********************************************************************** beginfont("EN:substituent 2") - font_wd:=70mm; - font_ht:=15mm; - sw_clip:=1; - MCf(<-30,!`1,//O,!2`1,/*H,!2`1,*/H,!2`1,*/*H,!2`1,**?3,!`1) + fsize:=(70mm,15mm); + sw_trimming:=1; + MC(<-30,!`1,//O,!2`1,/*H,!2`1,*/H,!2`1,*/*H,!2`1,**?3,!`1) endfont %*********************************************************************** beginfont("EN:substituent 3") - font_ht:=18mm; - sw_clip:=1; - MCf(<30,``1,!2,/_`2^30,!2,/!2>lr,!2,/!2>rl,!) + fsize:=(60mm,18mm); + sw_trimming:=1; + MC(<30,``1,!2,/_`2^30,!2,/!2>lr,!2,/!2>rl,!) endfont %*********************************************************************** beginfont("EN:substituent 3") - font_wd:=70mm; - font_ht:=18mm; - margin_top_bottom:=2mm; + fsize:=(70mm,18mm); + fmargin:=(2mm,2mm); sw_numberA:=1; - sw_clip:=1; + sw_trimming:=1; numberA_end:=17; - MCf(<-30,!16,2:/_,4:/!,6:/!2,10:/iPr,14:/tBu,16:/Ph^-60) + MC(<-30,!16,2:/_,4:/!,6:/!2,10:/iPr,14:/tBu,16:/Ph^-60) endfont %*********************************************************************** beginfont("EN:substituent 4") - font_ht:=18mm; - sw_clip:=1; - margin_top_bottom:=2mm; + fsize:=(60mm,18mm); + sw_trimming:=1; + fmargin:=(2mm,2mm); sw_numberA:=1; numberA_end:=7; - MCf(<-30,!6`1,{2~wf,4~zf,6^-30}:/_) + MC(<-30,!6`1,{2~wf,4~zf,6^-30}:/_) endfont %*********************************************************************** beginfont("EN:substituent 5") - font_ht:=18mm; - margin_top_bottom:=2mm; - sw_clip:=1; + fsize:=(60mm,18mm); + sw_trimming:=1; sw_numberA:=1; numberA_end:=8; - MCf(<30,!7`1,3:/_`2^30,5:/!2>lr,7:/!2>rl) + MC(<30,!7`1,3:/_`2^30,5:/!2>lr,7:/!2>rl) endfont %*********************************************************************** beginfont("EN:chain strech direction mode 1") - font_ht:=27mm; - sw_clip:=1; + fsize:=(60mm,27mm); + sw_trimming:=1; ratio_chain_ring:=1; - MCf( + MC( ?4,{3^-90,3^-30,3^90}:/'(!3,"{hz}")>hz, {1^-60,1`1.5,1^60}:/'(!2,"{vt}")>vt ) endfont %*********************************************************************** beginfont("EN:chain strech direction mode 2") - font_ht:=23mm; - sw_clip:=1; + fsize:=(60mm,23mm); + sw_trimming:=1; ratio_chain_ring:=1; - MCf( + MC( <30,!6,{3^-30,3,3^30}:/'(!,!,!,"{lr}")>lr, {5^-30,5,5^30}:/'(!,!,!,"{rl}")>rl ) endfont %*********************************************************************** beginfont("EN:chain strech direction mode 3") - font_ht:=25mm; - sw_clip:=1; + fsize:=(60mm,25mm); + sw_trimming:=1; ratio_chain_ring:=1; - MCf(<-30,!6,{6>45}:/'(!3,"{45}"), + MC(<-30,!6,{6>45}:/'(!3,"{45}"), {3>'(90,-90,90)}:/'(!3,"{'(90,-90,90)}") ) endfont %*********************************************************************** beginfont("EN:change atom and substituent") - sw_clip:=1; - font_ht:=15mm; - MCf(<30,!2,NH,!2,SO,!2,SOO,!) + fsize:=(60mm,15mm); + sw_trimming:=1; + MC(<30,!2,NH,!2,SO,!2,SOO,!) endfont %*********************************************************************** beginfont("EN:Change color,font") - font_wd:=75mm; - font_ht:=20mm; + fsize:=(75mm,20mm); sw_label:=1; defaultfont:="cmtt10"; defaultsize:=10bp; - margin_left_right:=3mm; - MCa(0.25,0)(<30,Ph,{2,5}:N,3:/NH2,2:red,5:blue,3=green) + fmargin:=(3mm,1mm); + MCat(0.25,0)(<30,Ph,{2,5}:N,3:/NH2,2:red,5:blue,3=green) ext(label.lft("(draw)",p0+(0,.9h));) atomfont:="cmr8"; - MCa(1,0)(<30,Ph,{2,5}:N,3:/NH2) + MCat(1,0)(<30,Ph,{2,5}:N,3:/NH2) ext(label.lft("(cmr8)",p0+(0,.9h));) endfont %*********************************************************************** beginfont("EN:Make brock") - font_ht:=8mm; - sw_clip:=1; + fsize:=(60mm,8mm); + sw_trimming:=1; sw_numberB:=1; - MCf(<30,!2,|<,``1.2,!2,>|,!2) + MC(<30,!2,|<,``1.2,!2,>|,!2) endfont %*********************************************************************** beginfont("EN:Chain start multi characters") - font_ht:=9mm; - sw_clip:=1; - sw_solid:=1; - MCf(<30,COOH,!0,!5,COOH) + fsize:=(60mm,9mm); + sw_trimming:=1; + MC(<30,COOH,!0,!5,COOH) endfont; beginfont("EN:not good") - font_ht:=9mm; - margin_left_right:=5mm; - sw_solid:=1; - sw_clip:=1; - MCf(<30,COOH,!6,COOH) + fsize:=(60mm,9mm); + fmargin:=(5mm,2mm); + sw_trimming:=1; + MC(<30,COOH,!6,COOH) endfont; %*********************************************************************** beginfont("EN:User definition") - font_ht:=12mm; - sw_clip:=1; + fsize:=(60mm,12mm); + sw_trimming:=1; iBuOH:='(!,/_,!,OH); - MCf(<30,?6,{4,6}:/iBuOH) + MC(<30,?6,{4,6}:/iBuOH) endfont %*********************************************************************** beginfont("EN:Inline definition") - font_ht:=12mm; - margin_left_right:=2mm; - sw_clip:=1; - MCf(<30,!3,/'(!,/_,!,OH),!3) + fsize:=(60mm,12mm); + fmargin:=(2mm,1mm); + sw_trimming:=1; + MC(<30,!3,/'(!,/_,!,OH),!3) +endfont +%*********************************************************************** +beginfont("EN:mangle") + fsize:=(50mm,15mm); + blength:=6mm; + mangle:=0; + MCat(0.2,0.5)(Ph) + ext(drawarrow((A1 shifted (aw,0)) rotated A1dir..A1);) + mangle:=30; + MCat(0.8,0.5)(Ph) + ext(drawarrow((A1 shifted (aw,0)) rotated A1dir..A1);) +endfont +%*********************************************************************** +beginfont("EN:blength=0") + sw_fframe:=3; + fsize:=(40mm,15mm); + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%----------------------------------------------------------------------- +beginfont("EN:0<blength=<1") + sw_fframe:=3; + fsize:=(40mm,15mm); + blength:=0.1; + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%----------------------------------------------------------------------- +beginfont("EN:blength>1") + sw_fframe:=3; + fsize:=(40mm,15mm); + blength:=8mm; + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%*********************************************************************** +beginfont("EN:msize=(1)") + sw_fframe:=3; + sw_mframe:=1; + fsize:=(40mm,15mm); + msize:=(1,1); + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%------------------------------------------------------ +beginfont("EN:msize=(0.25,1)") + sw_fframe:=3; + sw_mframe:=1; + fsize:=(40mm,15mm); + msize:=(0.25,1); + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%------------------------------------------------------ +beginfont("EN:msize=(11mm,11mm)") + sw_fframe:=3; + sw_mframe:=1; + fsize:=(40mm,15mm); + msize:=(11mm,11mm); + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%*********************************************************************** +beginfont("EN:mposition") + sw_fframe:=3; + sw_mframe:=1; + fsize:=(40mm,15mm); + msize:=(1,0.8); + mposition:=(0.5,0.5); + MC(<30,Ph) +endfont +%----------------------------------------------------- +beginfont("EN:mposition") + sw_fframe:=3; + sw_mframe:=1; + fsize:=(40mm,15mm); + msize:=(1,0.8); + mposition:=(1,0); + MC(<30,Ph) +endfont +%----------------------------------------------------- +beginfont("EN:mposition") + sw_mframe:=1; + fsize:=(40mm,15mm); + msize:=(1,0.8); + mposition:=(10mm,4mm); + MC(<30,Ph) + EXT(drawdot p1 withpen pencircle scaled 3pt; + pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) endfont %*********************************************************************** beginfont("EN:Font size") - font_wd:=30mm;% - font_ht:=20mm;% - sw_font_frame:=1; - MCf(<30, - ?6,-4=?5,{3,8}=dl,{2,6,7,9}:N, - {2,6,9}:/_,{1,5}://O) -endfont -%*********************************************************************** -beginfont("EN:margin_left_right") - font_ht:=20mm; - sw_font_frame:=sw_mol_frame:=1; - margin_left_right:=0mm; - margin_top_bottom:=1mm; - MCa(0.5, 1)(<30,CH3,!0,!17,CH3) - margin_left_right:=0.4mm; - MCa(0.5,.5)(<30,CH3,!0,!17,CH3) - margin_left_right:=5mm; - MCa(0.5, 0)(<30,CH3,!0,!17,CH3) -endfont -%*********************************************************************** -beginfont("EN:margin_top_bottom") - font_ht:=20mm; - sw_font_frame:=sw_mol_frame:=1; - margin_left_right:=5mm; - margin_top_bottom:=0mm; - MCa(0.0, .5)(<30,Ph,5:/NH2) - margin_top_bottom:=0.4mm; - MCa(0.5, .5)(<30,Ph,5:/NH2) - margin_top_bottom:=5mm; - MCa(0.95, .5)(<30,Ph,5:/NH2) + fsize:=(40mm,15mm); + sw_fframe:=1; + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + ) +endfont +%*********************************************************************** +beginfont("EN:fmargin") + fsize:=(40mm,15mm); + sw_fframe:=3; + sw_mframe:=1; + fmargin:=(10mm,3mm); + MC(<30,Ph) + EXT(pickup pencircle scaled 0.2pt; + for i=0 upto w/mm: draw (i*mm,0)--(i*mm,-.5mm); endfor + for i=0 upto h/mm: draw (0,i*mm)--(-.5mm,i*mm); endfor + for i=0 upto w/cm: draw (i*cm,0)--(i*cm,-.8mm); endfor + for i=0 upto h/cm: draw (0,i*cm)--(-.8mm,i*cm); endfor + drawdot p0 withpen pencircle scaled 3pt; + ) endfont %*********************************************************************** beginfont("EN:offset_thickness") - font_ht:=12mm; - offset_thickness:=0.0pt; MCa(0.08,0.5)(<30,Ph) - offset_thickness:=0.2pt; MCa(.5,0.5)(<30,Ph) - offset_thickness:=0.5pt; MCa(0.92,0.5)(<30,Ph) endfont + fsize:=(60mm,15mm); + offset_thickness:=0.0pt; MCat(0.08,0.5)(<30,Ph) + offset_thickness:=0.2pt; MCat(.5,0.5)(<30,Ph) + offset_thickness:=0.5pt; MCat(0.92,0.5)(<30,Ph) endfont %*********************************************************************** beginfont("EN:offset_bond_gap") - font_ht:=12mm; + fsize:=(60mm,15mm); offset_bond_gap:=0.0pt; - MCa(0.08, .5)(<30,Ph) + MCat(0.08, .5)(<30,Ph) offset_bond_gap:=0.3pt; %<<== default - MCa(.50, .5)(<30,Ph) + MCat(.50, .5)(<30,Ph) offset_bond_gap:=1.0pt; - MCa(0.92, .5)(<30,Ph) + MCat(0.92, .5)(<30,Ph) endfont %*********************************************************************** beginfont("EN:offset_atom") - font_ht:=14mm; + fsize:=(60mm,15mm); offset_atom:=0.0pt; - MCa(0.08, .5)(<30,?6,3:O) + MCat(0.08, .5)(<30,?6,3:O) offset_atom:=0.8pt; %<<== default - MCa(.5, .5)(<30,?6,3:O) + MCat(.5, .5)(<30,?6,3:O) offset_atom:=2.0pt; - MCa(0.92, .5)(<30,?6,3:O) + MCat(0.92, .5)(<30,?6,3:O) endfont %*********************************************************************** beginfont("EN:offset_wedge") + fsize:=(60mm,15mm); offset_wedge:=0.0pt; - font_ht:=14mm; - MCa(0.08, .5)(<30,?6,5:*/_) + MCat(0.08, .5)(<30,?6,5:*/_) offset_wedge:=0.4pt; %<<== default - MCa( .5, .5)(<30,?6,5:*/_) + MCat( .5, .5)(<30,?6,5:*/_) offset_wedge:=1.0pt; - MCa(0.92, .5)(<30,?6,5:*/_) + MCat(0.92, .5)(<30,?6,5:*/_) endfont %*********************************************************************** -beginfont("EN:max_bond_length") - font_ht:=25mm; - sw_mol_frame:=1; - max_bond_length:=6mm; - MCa(0, .5)(<30,Ph) - max_bond_length:=8mm; - MCa(.4,.5)(<30,Ph) - max_bond_length:=20mm; %<<== default - MCa(1, .5)(<30,Ph) +beginfont("EN:max_blength") + fsize:=(60mm,25mm); + sw_mframe:=1; + max_blength:=6mm; + MCat(0, .5)(<30,Ph) + max_blength:=8mm; + MCat(.4,.5)(<30,Ph) + max_blength:=20mm; %<<== default + MCat(1, .5)(<30,Ph) endfont %*********************************************************************** beginfont("EN:ratio_thickness_bond") - font_ht:=12mm; + fsize:=(60mm,15mm); ratio_thickness_bond:=0.005; - MCa(0.08, .5)(<30,Ph) + MCat(0.08, .5)(<30,Ph) ratio_thickness_bond:=0.015; %<<== default - MCa(.5, .5)(<30,Ph) + MCat(.5, .5)(<30,Ph) ratio_thickness_bond:=0.03; - MCa(0.92, .5)(<30,Ph) + MCat(0.92, .5)(<30,Ph) endfont %*********************************************************************** beginfont("EN:ratio_char_bond") - font_ht:=15mm; + fsize:=(60mm,15mm); ratio_char_bond:=1.0; - MCa( 0, .5)(<30,?6,6:O,3:NH) + MCat( 0, .5)(<30,?6,6:O,3:NH) ratio_char_bond:=1.5; %<<== default - MCa(.5, .5)(<30,?6,6:O,3:NH) + MCat(.5, .5)(<30,?6,6:O,3:NH) ratio_char_bond:=2.0; - MCa( 1, .5)(<30,?6,6:O,3:NH) + MCat( 1, .5)(<30,?6,6:O,3:NH) endfont %*********************************************************************** beginfont("EN:ratio_bondgap_bond") - font_ht:=12mm; + fsize:=(60mm,15mm); ratio_bondgap_bond:=0.10; - MCa(0.08, .5)(<30,Ph) + MCat(0.08, .5)(<30,Ph) ratio_bondgap_bond:=0.15; %<<== default - MCa(.5, .5)(<30,Ph) + MCat(.5, .5)(<30,Ph) ratio_bondgap_bond:=0.20; - MCa(0.92, .5)(<30,Ph) + MCat(0.92, .5)(<30,Ph) endfont %*********************************************************************** beginfont("EN:ratio_atom_bond") - font_ht:=15mm; + fsize:=(60mm,15mm); ratio_atom_bond:=0.25; - MCa(0.08, .5)(<30,?6,3:O) + MCat(0.08, .5)(<30,?6,3:O) ratio_atom_bond:=0.33; %<<== default - MCa(.5, .5)(<30,?6,3:O) + MCat(.5, .5)(<30,?6,3:O) ratio_atom_bond:=0.45; - MCa(0.92, .5)(<30,?6,3:O) + MCat(0.92, .5)(<30,?6,3:O) endfont %*********************************************************************** beginfont("EN:ratio_wedge_bond") - font_ht:=15mm; + fsize:=(60mm,15mm); ratio_wedge_bond:=0.1; - MCa(0.08, .5)(<30,?6,5:*/_) + MCat(0.08, .5)(<30,?6,5:*/_) ratio_wedge_bond:=0.12; %<<== default - MCa(.5, .5)(<30,?6,5:*/_) + MCat(.5, .5)(<30,?6,5:*/_) ratio_wedge_bond:=0.2;; - MCa(0.92, .5)(<30,?6,5:*/_) + MCat(0.92, .5)(<30,?6,5:*/_) endfont %*********************************************************************** beginfont("EN:ratio_atomgap_atom") - font_ht:=8mm; - sw_atom_frame:=1; + fsize:=(60mm,8mm); + sw_aframe:=1; ratio_atomgap_atom:=0.00; - MCa(0, .5)(<-30,!2,2:O) + MCat(0, .5)(<-30,!2,2:O) ratio_atomgap_atom:=0.050; %<<== default - MCa(.5, .5)(<-30,!2,2:O) + MCat(.5, .5)(<-30,!2,2:O) ratio_atomgap_atom:=0.12; - MCa(1, .5)(<-30,!2,2:O) + MCat(1, .5)(<-30,!2,2:O) endfont %*********************************************************************** beginfont("EN:ratio_chain_ring") - font_wd:=70mm; - font_ht:=15mm; + fsize:=(70mm,15mm); ratio_chain_ring:= 0.4; - MCa(0, .5)(<30,?6,4:/!) + MCat(0, .5)(<30,?6,4:/!) ratio_chain_ring:= 0.66; %<<== default - MCa(.45, .5)(<30,?6,4:/!) + MCat(.45, .5)(<30,?6,4:/!) ratio_chain_ring:= 1; - MCa(1, .5)(<30,?6,4:/!) + MCat(1, .5)(<30,?6,4:/!) endfont %*********************************************************************** beginfont("EN:ratio_zebragap_bond") - font_ht:=15mm; + fsize:=(60mm,15mm); ratio_zebragap_bond:=0.06; - MCa(0.08, .5)(<-30,!2,2:/*_`1) + MCat(0.08, .5)(<-30,!2,2:/*_`1) ratio_zebragap_bond:=0.12; %<<== default - MCa( .5, .5)(<-30,!2,2:/*_`1) + MCat( .5, .5)(<-30,!2,2:/*_`1) ratio_zebragap_bond:=0.20; - MCa(0.92, .5)(<-30,!2,2:/*_`1) + MCat(0.92, .5)(<-30,!2,2:/*_`1) endfont %*********************************************************************** beginfont("EN:Switwch numberingA") - font_ht:=20mm; + fsize:=(60mm,20mm); ratio_chain_ring:=1; numberA_start:=3; numberA_end:=8; - sw_numberA:=1; MCa(.5,.9)(<30,!9) - sw_numberA:=2; MCa(.5,.5)(<30,!9) - sw_numberA:=3; MCa(.5,.1)(<30,!9) + sw_numberA:=1; MCat(.5,.9)(<30,!9) + sw_numberA:=2; MCat(.5,.5)(<30,!9) + sw_numberA:=3; MCat(.5,.1)(<30,!9) endfont %*********************************************************************** beginfont("EN:Switwch numberingB") - font_ht:=20mm; + fsize:=(60mm,20mm); ratio_chain_ring:=1; numberB_start:=3; numberB_end:=8; - sw_numberB:=1; MCa(.5,.9)(<30,!9) - sw_numberB:=2; MCa(.5,.5)(<30,!9) - sw_numberB:=3; MCa(.5,.1)(<30,!9) + sw_numberB:=1; MCat(.5,.9)(<30,!9) + sw_numberB:=2; MCat(.5,.5)(<30,!9) + sw_numberB:=3; MCat(.5,.1)(<30,!9) endfont %*********************************************************************** -beginfont("EN:Switwch clipping") - font_ht:=15mm; - sw_font_frame:=3; - sw_mol_frame:=1; - MCd(1,.7)(.2,.3)(Ph) - MCd(1,.7)(.8,.7)(Ph) +beginfont("EN:Switwch trimming") + fsize:=(60mm,20mm); + sw_fframe:=3; + sw_mframe:=1; + msize:=(1,.7); MCat(.2,.3)(Ph) + MCat(.8,.7)(Ph) endfont %----------------------------------------------------------------------- -beginfont("EN:Switwch clipping") - font_ht:=15mm; - sw_font_frame:=3; - sw_mol_frame:=1; - sw_clip:=1; - MCd(1,.7)(.2,.3)(Ph) - MCd(1,.7)(.8,.7)(Ph) -endfont -%*********************************************************************** -beginfont("EN:Switwch Solid ratio=0") - font_ht:=18mm; - bond_len:=8mm; - MCf(<30,Ph) -endfont -%----------------------------------------------------------------------- -beginfont("EN:Switwch Solid ratio=1") - font_ht:=18mm; - bond_len:=8mm; - sw_solid:=1; - ratio_bond_width:=0.1; - MCf(<30,Ph) -endfont -%----------------------------------------------------------------------- -beginfont("EN:Switwch Solid ratio=2") - font_ht:=18mm; - bond_len:=10mm; - sw_solid:=2; - MCf(<30,Ph) -endfont -%----------------------------------------------------------------------- -beginfont("EN:sw_clip=1") - font_ht:=18mm; - bond_len:=10mm; - sw_solid:=2; - sw_clip:=1; - MCf(<30,Ph) +beginfont("EN:Switwch trimming") + fsize:=(60mm,20mm); + sw_fframe:=3; + sw_mframe:=1; + sw_trimming:=1; + msize:=(1,.7); + MCat(.2,.3)(Ph) + MCat(.8,.7)(Ph) endfont %*********************************************************************** beginfont("EN:Switwch Expand") - font_ht:=20mm; - MCa(0, .5)(<30,Ph,4:/COOH,3:/NH2) + fsize:=(60mm,20mm); + MCat(0, .5)(<30,Ph,4:/COOH,3:/NH2) sw_expand:=1; - MCa(1, .5)(<30,Ph,4:/COOH,3:/NH2) + MCat(1, .5)(<30,Ph,4:/COOH,3:/NH2) endfont %*********************************************************************** beginfont("EN:Switwch substituent off") - font_ht:=15mm; - MCa(.15, .5)(<30,Ph,4:/Cl,3:/F) + fsize:=(60mm,15mm); + MCat(.15, .5)(<30,Ph,4:/Cl,3:/F) sw_subst_off:=1; - MCa(.85, .5)(<30,Ph,4:/Cl,3:/F) + MCat(.85, .5)(<30,Ph,4:/Cl,3:/F) endfont %*********************************************************************** beginfont("EN:Switwch bondtype off") - font_ht:=15mm; - MCa(.15, .5)(<30,Ph,4:/Cl,3:/F) - sw_bond_single:=1; - MCa(.85, .5)(<30,Ph,4:/Cl,3:/F) + fsize:=(60mm,15mm); + MCat(.15, .5)(<30,Ph,4:/Cl,3:/F) + sw_single:=1; + MCat(.85, .5)(<30,Ph,4:/Cl,3:/F) endfont %*********************************************************************** beginfont("EN:Switwch font frame 1") - font_ht:=15mm; - margin_left_right:=5mm; - margin_top_bottom:=2mm; - sw_font_frame:=1; - MCf(<30,Ph,4:/Cl,3:/F) + fsize:=(40mm,12mm); + fmargin:=(5mm,2mm); + sw_fframe:=1; + MC(<30,Ph) endfont beginfont("EN:Switwch font frame 2") - font_ht:=15mm; - margin_left_right:=5mm; - margin_top_bottom:=2mm; - sw_font_frame:=2; - MCf(<30,Ph,4:/Cl,3:/F) + fsize:=(40mm,12mm); + fmargin:=(5mm,2mm); + sw_fframe:=2; + MC(<30,Ph) endfont beginfont("EN:Switwch font frame 3") - font_ht:=15mm; - margin_left_right:=5mm; - margin_top_bottom:=2mm; - sw_font_frame:=3; - MCf(<30,Ph,4:/Cl,3:/F) + fsize:=(40mm,12mm); + fmargin:=(5mm,2mm); + sw_fframe:=3; + MC(<30,Ph) endfont %*********************************************************************** beginfont("EN:Switwch molecular frame") - font_ht:=15mm; - sw_mol_frame:=1; - MCf(<30,Ph,4:/Cl,3:/F) + sw_fframe:=1; + fsize:=(40mm,15mm); + msize:=(1,1); + sw_mframe:=1; + MC(<30,Ph) endfont %*********************************************************************** beginfont("EN:Switwch atom frame") - font_ht:=12mm; - sw_atom_frame:=1; - MCf(<30,COOH,!0,COOH) + fsize:=(60mm,15mm); + sw_aframe:=1; + MC(<30,COOH,!0,COOH) endfont %*********************************************************************** beginfont("EN:Local setting 1") - font_wd:=15mm; - font_ht:=12mm; - MCf(Ph) + fsize:=(15mm,12mm); + MC(Ph) endfont beginfont("EN:Local setting 2") - font_wd:=15mm; - font_ht:=12mm; + fsize:=(15mm,12mm); ratio_thickness_bond:=0.05; - MCf(Ph) + MC(Ph) endfont beginfont("EN:Local setting 3") - font_wd:=15mm; - font_ht:=12mm; - MCf(Ph) + fsize:=(15mm,12mm); + MC(Ph) endfont %*********************************************************************** save_ratio:=ratio_thickness_bond; beginfont("EN:Local setting 1") - font_wd:=15mm; - font_ht:=12mm; - MCf(Ph) + fsize:=(15mm,12mm); + MC(Ph) endfont ratio_thickness_bond:=0.05; beginfont("EN:Local setting 2") - font_wd:=15mm; - font_ht:=12mm; - MCf(Ph) + fsize:=(15mm,12mm); + MC(Ph) endfont beginfont("EN:Local setting 3") - font_wd:=15mm; - font_ht:=12mm; - MCf(Ph) + fsize:=(15mm,12mm); + MC(Ph) endfont ratio_thickness_bond:=save_ratio; %*********************************************************************** -beginfont("EN:MCd()") - font_wd:=60mm; - font_ht:=20mm; - sw_font_frame:=1; - sw_mol_frame:=1; - MCd(1,0.8)(0.1,1)(<30,Ph,4:/Cl,3:/F) - sw_mol_frame:=1; - MCd(1,0.8)(0.9,0)(<30,Ph,4:/Cl,3:/F) -endfont -%*********************************************************************** -beginfont("EN:MCa()") - font_wd:=60mm; - font_ht:=20mm; - sw_font_frame:=1; - sw_mol_frame:=1; - MCa(0.1,0.5)(<30,Ph,4:/Cl,3:/F) - sw_mol_frame:=1; - MCa(0.9,0.5)(<30,Ph,4:/Cl,3:/F) -endfont -%*********************************************************************** -beginfont("EN:MCc()") - font_wd:=60mm; - font_ht:=20mm; - sw_font_frame:=1; - MCc(1 ,1 )(?6) - MCc(0.75,0.75)(?6) - MCc(0.5 ,0.5 )(?6) -endfont -%*********************************************************************** -beginfont("EN:MCf() ht1") - margin_left_right:=margin_top_bottom:=0.5mm; - font_wd:=25mm; - font_ht:=15mm; - sw_font_frame:=1; - sw_mol_frame:=1; - MCf(<30,Ph) -endfont -%----------------------------------------------------------------------- -beginfont("EN:MCf() ht2") - margin_left_right:=margin_top_bottom:=0.5mm; - font_wd:=25mm; - font_ht:=15mm; - sw_font_frame:=1; - sw_mol_frame:=1; - MCf(<30,Ph,4:/Cl,3:/F) -endfont -%----------------------------------------------------------------------- -beginfont("EN:MCf() vt") - margin_left_right:=margin_top_bottom:=0.5mm; - font_wd:=15mm; - font_ht:=25mm; - sw_font_frame:=1; - sw_mol_frame:=1; - MCf(<30,Ph) +beginfont("EN:MC() ") + fmargin:=(0.5mm,0.5mm); + fsize:=(40mm,15mm); + sw_fframe:=1; + sw_mframe:=1; + MC(<30,Ph,4:/Cl,3:/F) endfont %----------------------------------------------------------------------- -beginfont("EN:MCf() vt2") - margin_left_right:=margin_top_bottom:=0.5mm; - font_wd:=15mm; - font_ht:=25mm; - sw_font_frame:=1; - sw_mol_frame:=1; - MCf(<30,Ph,4:/Cl,3:/F) +beginfont("EN:MCat()") + defaultsize:=5bp; + fsize:=(75mm,75mm); + fmargin:=(3mm,3mm); + blength:=0.07; + sw_fframe:=1; + mangle:=0; + for i=1 step -0.25 until 0: + for j=0 step 0.25 until 1: + MCat(j,i)(Ph,4:N) + ext( + drawarrow((A1 shifted (aw,0)) rotated A1dir..A1); + label(decimal(mangle),p0+(0.5w,0.5h)); + ) + mangle:=mangle+15; + endfor + endfor endfont %*********************************************************************** beginfont("EN:EXT()") - font_wd:=70mm; - font_ht:=30mm; - ratio_bond_width:=0.065; - sw_solid:=1; + fsize:=(70mm,30mm); + blength:=0.065; sw_label_emu:=1; % - MCa(0.1,0.5)(<-210,60`1,60`1,60`1,{1,3}=dl,1:/R1,4:/R2^-60) + MCat(0.1,0.5)(<-210,60`1,60`1,60`1,{1,3}=dl,1:/R1,4:/R2^-60) ext( defaultscale:=0.6; label.bot("Diene",p0+(0.5w,0)); ) - MCa(0.4,0.5)(<-30,-60`1,1=dl,1:/R3,2:/R4^60) + MCat(0.4,0.5)(<-30,-60`1,1=dl,1:/R3,2:/R4^60) ext( defaultscale:=0.6; label.bot("Dienophile",p0+(0.5w,0)); ) - MCa(0.9,0.5)(<30,?6,6=dl,2:/R2,3:/R4,4:/R3,5:/R1) + MCat(0.9,0.5)(<30,?6,6=dl,2:/R2,3:/R4,4:/R3,5:/R1) EXT( drawarrow (0.52w,0.5h)..(0.6w,0.5h); defaultscale:=0.7; @@ -972,123 +999,123 @@ beginfont("EN:EXT()") endfont %*********************************************************************** beginfont("EN:ext()") - font_wd:=50mm; - font_ht:=20mm; - MCd(1,0.7)(0,0.5)(<30,?6,3=dl,4:/CH3) + fsize:=(50mm,20mm); + msize:=(1,0.7); MCat(0,0.5)(<30,?6,3=dl,4:/CH3) ext( label.top("+",A7); drawarrow B3{dir(B3dir-90)}.. {dir(B7dir+90)}0.4[B7s,B7e]; ) - MCd(1,0.7)(1,0.5)(<30,?6,4://CH3) + msize:=(1,0.7); MCat(1,0.5)(<30,?6,4://CH3) ext( labeloffset:=0bp; label.lrt("+",A3); ) EXT(drawdblarrow (0.4w,0.5h)..(0.55w,0.5h);) endfont -sw_clip:=1; +sw_trimming:=1; %*************************************************************************** beginfont("EN:Acetamiprid","MW:222.676") - font_ht:=20mm; - MCf(<30,Ph,2:N,1:/Cl,4:\,!,N,/_,!,/_,!!,N,!,CN) + fsize:=(60mm,18mm); + MC(<30,Ph,2:N,1:/Cl,4:\,!,N,/_,!,/_,!!,N,!,CN) endfont %*************************************************************************** beginfont("EN:Fenitrothion","MW:277.231") - font_ht:=20mm; - MCf(<30,!,O,!,P,//S,/O!^160,!,O,!,|,Ph,3:/_,4:/NO2) + fsize:=(60mm,18mm); + MC(<30,!,O,!,P,//S,/O!^160,!,O,!,|,Ph,3:/_,4:/NO2) endfont %*************************************************************************** beginfont("EN:Permethrin","MW:391.288") - font_ht:=25mm; - MCf(<-30,?3,2^-35:*/_,2^35:/*_,1:\,!!,/Cl,!,Cl, + fsize:=(60mm,25mm); + MC(<-30,?3,2^-35:*/_,2^35:/*_,1:\,!!,/Cl,!,Cl, 3:\,//O,!,O,!2,Ph,-4:\,O,-60,Ph) endfont %*************************************************************************** beginfont("EN:Endosulfan","MW:406.904"); - font_ht:=25mm; - MCf(<26,?7,7=?6[13],11:@,208~wf`1.45,8~wb:#,10=d,{3,5}:O,4:S,4://O, + fsize:=(60mm,25mm); + MC(<26,?7,7=?6[13],11:@,208~wf`1.45,8~wb:#,10=d,{3,5}:O,4:S,4://O, {8,9,10,11,12^-210,12^-150}:/Cl) endfont; %*************************************************************************** beginfont("EN:Luciferin","MW:280.33") - MCf(<30,Ph,3=?5,8:\,?5,{9,16}=dl, + fsize:=(60mm,20mm); + MC(<30,Ph,3=?5,8:\,?5,{9,16}=dl, {9,14}:N,{7,11}:S,1:/OH,-2:*/COOH) endfont %*************************************************************************** beginfont("EN:Warfarin","CAS:81-81-2","FM:C19H16O4","MW:308.33") - font_ht:=25mm; - MCf(<30,Ph,3=?6,8=dl,10:O,7:/OH,9://O,8:\,/Ph`1,60,!,//O,!) + fsize:=(60mm,25mm); + MC(<30,Ph,3=?6,8=dl,10:O,7:/OH,9://O,8:\,/Ph`1,60,!,//O,!) endfont %*************************************************************************** beginfont("EN:Limonin") - font_ht:=30mm; - MCf(<30,?6,{-3,-4}=?6,-5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, + fsize:=(60mm,30mm); + MC(<30,?6,{-3,-4}=?6,-5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, {13,15,17,20}:O,{3,12,21}://O, {4~wf^60,8~zf^60,18^35,18^-35}:/_,{1^60,5^180,16^60}:/*H, 14:\*,|,?5,{1,4}=dl,3:O) endfont %*************************************************************************** beginfont("EN:Sesamine") - font_ht:=25mm; - MCf(<54,?5,1=?5,{4,7}:O,{1^-54,2^54}:*/H, + fsize:=(60mm,25mm); + MC(<54,?5,1=?5,{4,7}:O,{1^-54,2^54}:*/H, $5:*\^-12,Ph,-3=?5,{-1,-3}:O,8:*\^-12,Ph,-3=?5,{-1,-3}:O) endfont %*************************************************************************** beginfont("EN:Colchicine","CAS:477-27-0","FM:C21H23NO6","MW:385.41") - font_ht:=25mm; - MCf(<30,Ph,{1,2,6}:/O!,|,-4=?7, + fsize:=(60mm,25mm); + MC(<30,Ph,{1,2,6}:/O!,|,-4=?7, |,-5=?7,{-1,-4,-6}=dl,-2://O,-3:/O!, $9:\,NH,!,//O,!) endfont %*************************************************************************** beginfont("EN:Lycorine","CAS:476-28-8","FM:C16H17NO4","MW:287.31") - font_ht:=25mm; - MCf(<30, + fsize:=(60mm,25mm); + MC(<30, Ph,-4=?6,-2=?6,6=?5,(9,12)=?5[3],13=dl,8:N,{15,17}:O, 9:/*H^180,10:*/H^60,13:*/OH,14:/*OH ) endfont %*********************************************************************** beginfont("EN:Gibberellin A3","CAS:77-06-5","FM:C19H22O6","MW:346.37"); - font_ht:=20mm; - MCf(<18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#,13=dl,6=wf,8=wb, + fsize:=(60mm,20mm); + MC(<18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#,13=dl,6=wf,8=wb, 5:@,40~zf`1,O,50,//O^180,14~zb:#, 2:/COOH,7://_,13:*/OH,8:/*OH,14:*/_,{1,4}:*/H^60) endfont %*************************************************************************** beginfont("EN:Quinine","CAS:130-95-0","FM:C20H24N2O2","MW:324.42") - font_ht:=25mm; - MCf(<30,Ph,3=Ph,7:N,6:/O!, + fsize:=(60mm,25mm); + MC(<30,Ph,3=Ph,7:N,6:/O!, 10:\,*/OH,/H~zf^-60,!,|,?6,2:N,1:*/H^60,4:*\,!!,2:@,165~zf,60,5~zb:#) endfont %*************************************************************************** beginfont("EN:Atoropin","CAS:51-55-8","FM:C17H23NO3","MW:289.37") - font_ht:=25mm; - MCf(<-30,O,!,//O,!,!,Ph, + fsize:=(60mm,22mm); + MC(<-30,O,!,//O,!,!,Ph, $1:@,-120~zb,|,?7,6:*\^190`1.12,N,/_,3~wb:#,$3:*\*,!,OH) endfont %*************************************************************************** beginfont("EN:Rotenone"); - font_ht:=30mm; - MCf(<-60,?5,{-3,-2,-3,-4}=?6,{7,9,-2,-4}=dl,{3,17}=dr, + fsize:=(60mm,30mm); + MC(<-60,?5,{-3,-2,-3,-4}=?6,{7,9,-2,-4}=dl,{3,17}=dr, {2,13,16}=O,10://O,{11^-60,12^60}:*/H,{-2,-3}:/O!,1:*\,/_,!!) endfont; %*************************************************************************** beginfont("EN:Pyrethrin I"); - MCf(<30,?3,{3^35~wf,3^-35~zf}:/_,1:*\,!!,iPr, + MC(<30,?3,{3^35~wf,3^-35~zf}:/_,1:*\,!!,iPr, 2:\*,//O,!,O,-36~zb,|,?5,-2=dl,-1:/_,-3://O,-2:\,!4,{-1,-3}=dl) endfont; %*************************************************************************** beginfont("EN:Validamycin") - font_ht:=20mm; - MCf(<30,?6,{5,6}:/OH,3:/!OH>rl, + fsize:=(60mm,20mm); + MC(<30,?6,{5,6}:/OH,3:/!OH>rl, $4:\,O,-60,|,?6,2:O,{3,4,5}:/OH,6:/!OH, $1:\,NH,!,|,?6,2=dl,{4,5,6}:/OH,3:/!OH) endfont %*************************************************************************** beginfont("EN:Paclitaxel","CAS:33069-62-4","FM:C47H51NO14","MW:853.91") - MCf(?6,5=dl,3:@,|<,``1,36,45,45,45,45,>|, + MC(?6,5=dl,3:@,|<,``1,36,45,45,45,45,>|, $5:#,-4=?6,-4=?4,-1=wb,-3=wf,-1:O,||, {4^35,4^-35,6}:/_,{3^-60,15}:*/OH,8:/*H^-60,9:*/_^60,10://O, 1:\,O,!,//O,!,*/OH,!,/Ph,60~wf,NH,-60,//O,60,Ph, @@ -1096,15 +1123,15 @@ beginfont("EN:Paclitaxel","CAS:33069-62-4","FM:C47H51NO14","MW:853.91") endfont %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% beginfont("EN:Ampicillin","MW:349.405") - font_ht:=15mm; - MCf(<45,?4,-3=?5,2:N,7:S, + fsize:=(60mm,15mm); + MC(<45,?4,-3=?5,2:N,7:S, {3^45,4^-45}:/*H,1://O^15,5:/*COOH^-18,{6^35,6^-35}:/_, 4:*\^75,NH,!,//O,!,/*NH2,!,Ph) endfont %*************************************************************************** beginfont("EN:Cholesterol","CAS:57-88-5","FM:C27H46O","MW:386.65") - font_ht:=15mm; - MCf( + fsize:=(60mm,15mm); + MC( <30,?6,{-4,-2}=?6,-4=?5,7=dl, 1:*/OH,{4,12}:*/_^60,9:*/H^60, 10:/*H^180,11:/*H^-60,17:/*H^-54, diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf Binary files differindex 096e931e2fe..9fd36cb57f6 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex index e040e72eec4..d6d8bab65b7 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex @@ -1,5 +1,5 @@ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% Molecular Coding Format manual by Akira Yamaji 2019.02.11 +% Molecular Coding Format manual by Akira Yamaji 2019.03.03 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% \documentclass[a4paper]{article} %%%%\documentclass[a4paper,twoside]{article} @@ -380,8 +380,9 @@ pk font,PNG,SVG,EPS or MDL MOL file. \MCFgraph %----------------------------------------------------------------------------- \subsection{Fuse ring} -\subsubsection{Attached 1 bond} \begin{verbatim} + (Attached 1 bond) + ?6,3=?6 : fuse ?6 at B3 ** Bn(n:-999<=n<=4095): bond number @@ -412,16 +413,17 @@ pk font,PNG,SVG,EPS or MDL MOL file. \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- -\subsubsection{Attached 2 bond} \begin{verbatim} + (Attached 2 bond) + (4,11)=?6[4] : fuse 4/6 ring to B11..B4 (4,11)=?5[3] : fuse 3/5 ring to B11..B4 (4,11)=?4[2] : fuse 2/4 ring to B11..B4 ** ?m[n] (4<=m<=6,n=m-2) -1:MCd(1,.7)( 0,0)(<30,?6,3=?6,(11,4)=?6[4]) -2:MCd(1,.6)(.54,1)(<30,?6,3=?6,(11,4)=?5[3]) -3:MCd(1,.6)( 1,0)(<30,?6,3=?6,(11,4)=?4[2]) +1:<30,?6,3=?6,(11,4)=?6[4] +2:<30,?6,3=?6,(11,4)=?5[3] +3:<30,?6,3=?6,(11,4)=?4[2] \end{verbatim} \MCFgraph \vspace{-3mm}% @@ -429,14 +431,15 @@ pk font,PNG,SVG,EPS or MDL MOL file. 1 2 3 \end{verbatim} %----------------------------------------------------------------------------- -\subsubsection{Attached 3 bond} \begin{verbatim} + (Attached 3 bond) + (16,4)=?6[3] : fuse 3/6 ring to B16..B4 (16,4)=?5[2] : fuse 2/5 ring to B16..B4 ** ?m[n] (5<=m<=6,n=m-3) -1:MCd(1,.55)(0,0)(?6,{3,10}=?6,(16,4)=?6[3]) -2:MCd(1,.55)(1,0)(?6,{3,10}=?6,(16,4)=?5[2]) +1:?6,{3,10}=?6,(16,4)=?6[3] +2:?6,{3,10}=?6,(16,4)=?5[2] \end{verbatim} \MCFgraph \vspace{-3mm}% @@ -444,17 +447,19 @@ pk font,PNG,SVG,EPS or MDL MOL file. 1 2 \end{verbatim} %----------------------------------------------------------------------------- -\subsubsection{Attached 4 bond} +%%%%\subsubsection{Attached 4 bond} \begin{verbatim} + (Attached 4 bond) + (21,4)=?6[2] : fuse 2/6 ring to B21..B4 - MCf(<-30,?6,{3,10,15}=?6,(21,4)=?6[2]) + MC(<-30,?6,{3,10,15}=?6,(21,4)=?6[2]) ** ?m[n] (m=6,n=2) \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- -\subsubsection{Spiro ring} +\subsection{Spiro ring} \begin{verbatim} 4:@,?5 : add ?5 at A4 @@ -581,11 +586,11 @@ pk font,PNG,SVG,EPS or MDL MOL file. defaultfont:="cmtt8"; defaultsize:=8bp; - MCa(0.25,0)(<30,Ph,{2,5}:N,3:/NH2, - 2:red,5:blue,3=green) + MCat(0.25,0)(<30,Ph,{2,5}:N,3:/NH2, + 2:red,5:blue,3=green) ext(label.lft("(draw)",p0+(0,0.9h));) atomfont:="cmr8"; % default:"draw" - MCa(1,0)(<30,Ph,{2,5}:N,3:/NH2) + MCat(1,0)(<30,Ph,{2,5}:N,3:/NH2) ext(label.lft("(cmr8)",p0+(0,0.9h));) \end{verbatim} {\MCFformat=0 \MCFgraph} @@ -606,11 +611,11 @@ pk font,PNG,SVG,EPS or MDL MOL file. if chain start multi charactor string, use !0 instead of ! - MCf(<30,COOH,!0,!3,COOH) + MC(<30,COOH,!0,!3,COOH) \end{verbatim} \MCFgraph \begin{verbatim} - MCf(<30,COOH,!4,COOH) + MC(<30,COOH,!4,COOH) \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- @@ -631,37 +636,91 @@ pk font,PNG,SVG,EPS or MDL MOL file. \newpage \section{Option parameter} %------------------------------------------------------------------------------ -\subsection{Size parameter} -\subsubsection{Font size} +\subsection{Angle parameter} \begin{verbatim} - beginfont("EN:Caffeine") - font_wd:=30mm; %<==font width - font_ht:=20mm; %<==font height - MCf(<30,?6,-4=?5,{3,8}=dl,{2,6,7,9}:N, - {2,6,9}:/_,{1,5}://O) endfont + mangle=0 ** default + + MCat(0.2,0.5)(Ph) + mangle:=30; + MCat(0.8,0.5)(Ph) \end{verbatim} \MCFgraph +%------------------------------------------------------------------------------ +\subsection{Size/Ratio parameter} %----------------------------------------------------------------------------- -\subsubsection{Margin left and right} +\subsubsection{Bond length} \begin{verbatim} - default: margin_left_right=0.4mm + (fit to font size) + blength=0 ** default \end{verbatim} \MCFgraph -\begin{picture}(12,20) -\put(1,14){\makebox(10,6)[r]{\tt 0mm}} -\put(1, 7){\makebox(10,6)[r]{\tt 0.4mm}} -\put(1, 0){\makebox(10,6)[r]{\tt 5mm}} -\end{picture} +%----------------------------------------- +\begin{verbatim} + (ratio bond/font width) + blength=0.1 ** (0<blength<=1) + blength=60mm(width)*0.1=6mm +\end{verbatim} +\MCFgraph +%----------------------------------------- +\begin{verbatim} + (bond length) + blength=9mm + ** (blength>1) ignore msize(w,h) +\end{verbatim} +\MCFgraph +%------------------------------------------------------------------------------ +\subsubsection{Molecular size} +\begin{verbatim} + msize=(1,1) ** default +\end{verbatim} +\MCFgraph +%----------------------------------------------------------- +\begin{verbatim} + msize=(0.25,1) + msize=40mm-4mm*0.25=9mm +\end{verbatim} +\MCFgraph +%----------------------------------------------------------- +\begin{verbatim} + msize=(11mm,11mm) +\end{verbatim} +\MCFgraph +%------------------------------------------------------------------------------ +\subsubsection{Molecular position} +\begin{verbatim} + mposition=(0.5,0.5) ** default +\end{verbatim} +\MCFgraph +%-------------------------------------------------------------- +\begin{verbatim} + mposition=(1,0) +\end{verbatim} +\MCFgraph +%-------------------------------------------------------------- +\begin{verbatim} + mposition=(10mm,4mm) +\end{verbatim} +\MCFgraph +%------------------------------------------------------------------------------ +\subsection{Size parameter} %----------------------------------------------------------------------------- -\subsubsection{Margin top and bottom} +\subsubsection{Font size} \begin{verbatim} - default: margin_top_bottom=0.4mm + fsize=(font width,font height) + ** default: (30mm,20mm) + + fsize=(40mm,15mm) \end{verbatim} \MCFgraph -\vspace{-3mm}% +%----------------------------------------------------------------------------- +\subsubsection{Font margin} \begin{verbatim} - 0mm 0.4mm 5mm + fmargin=(margin left rigth,top bottom) + ** default: (0.4mm,0.4mm) + + fmargin=(10mm,2mm) \end{verbatim} +\MCFgraph %----------------------------------------------------------------------------- \subsubsection{Offset thickness of bond} \begin{verbatim} @@ -705,7 +764,7 @@ pk font,PNG,SVG,EPS or MDL MOL file. %----------------------------------------------------------------------------- \subsubsection{Max bond length} \begin{verbatim} - default: max_bond_length=10mm + default: max_blength=10mm \end{verbatim} \MCFgraph \vspace{-3mm}% @@ -795,6 +854,8 @@ pk font,PNG,SVG,EPS or MDL MOL file. 0.06 0.12 0.20 \end{verbatim} %----------------------------------------------------------------------------- +\newpage +%----------------------------------------------------------------------------- \subsection{Drawing mode} %----------------------------------------------------------------------------- \subsubsection{Numbering atom} @@ -823,57 +884,27 @@ pk font,PNG,SVG,EPS or MDL MOL file. \put(0, 2){\makebox[5mm]{\tt 3}} \end{picture} %----------------------------------------------------------------------------- -\subsubsection{Clipping mode} +\subsubsection{Trimming mode} \begin{verbatim} - sw_clip:=0; - MCd(1,0.7)(0.2,0.3)(Ph) - MCd(1,0.7)(0.8,0.7)(Ph) - ** default: sw_clip=0 + sw_trimming:=0; ** default + msize:=(1,0.7); + MCat(0.2,0.3)(Ph) + MCat(0.8,0.7)(Ph) \end{verbatim} \MCFgraph \begin{verbatim} - sw_clip:=1; - MCd(1,0.7)(0.2,0.3)(Ph) - MCd(1,0.7)(0.8,0.7)(Ph) -\end{verbatim} -\MCFgraph -%----------------------------------------------------------------------------- -\subsubsection{Solid mode} -\begin{verbatim} - (fit to font size) - sw_solid=0 ** default -\end{verbatim} -\MCFgraph -%----------------------------------------- -\begin{verbatim} - (solid ratio bond/font width) - sw_solid:=1; - ratio_bond_width=0.1 - font_width=60mm - (bond_len=60mm*0.1=6mm) - ** ignore bond_len -\end{verbatim} -\MCFgraph -%----------------------------------------- -\begin{verbatim} - (solid bond length) - sw_solid:=2; - bond_len=10mm - ** ignore ratio_bond_width -\end{verbatim} -\MCFgraph -%----------------------------------------- -\begin{verbatim} - (solid bond length and clip) - sw_solid:=2; - sw_clip:=1; - bond_len=10mm + sw_trimming:=1; + MCat(0.2,0.3)(Ph) + MCat(0.8,0.7)(Ph) \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- \subsubsection{Expand mode} \begin{verbatim} - default: sw_expand=0 +MCat(0, .5)(<30,Ph,4:/COOH,3:/NH2) +sw_expand:=1; +MCat(1, .5)(<30,Ph,4:/COOH,3:/NH2) +** default: sw_expand=0 \end{verbatim} \MCFgraph\\ \makebox[5mm]{}% @@ -882,7 +913,7 @@ pk font,PNG,SVG,EPS or MDL MOL file. %----------------------------------------------------------------------------- \subsubsection{Substituent off mode} \begin{verbatim} - default: sw_subst_off=0 + ** default: sw_subst_off=0 \end{verbatim} \MCFgraph\\ \makebox[5mm]{}% @@ -891,7 +922,7 @@ pk font,PNG,SVG,EPS or MDL MOL file. %----------------------------------------------------------------------------- \subsubsection{Single bond mode} \begin{verbatim} - default: sw_bond_single=0 + ** default: sw_single=0 \end{verbatim} \MCFgraph\\ \makebox[5mm]{}% @@ -903,52 +934,48 @@ pk font,PNG,SVG,EPS or MDL MOL file. \subsubsection{Font frame} \begin{verbatim} (Draw font frame) - margin_left_right:=5mm; - margin_top_bottom:=2mm; - sw_font_frame:=1; - MCf(<30,Ph,4:/Cl,3:/F) + fmargin:=(5mm,2mm); + sw_fframe=1 \end{verbatim} \MCFgraph \begin{verbatim} (Draw frame inside margin) - sw_font_frame=2 + sw_fframe=2 \end{verbatim} \MCFgraph \begin{verbatim} (Draw both frame) - sw_font_frame=3 + sw_fframe=3 \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- \subsubsection{Molecular frame} \begin{verbatim} - sw_mol_frame:=1; - MCd(1,.5)(1,0.5)(<30,Ph,4:/Cl,3:/F) - ** default: sw_mol_frame=0 + sw_mframe=1 ** default:sw_mframe=0 \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- \subsubsection{Atom frame} \begin{verbatim} - sw_atom_frame:=1; - MCf(<30,COOH,!0,COOH) - ** default: sw_atom_frame=0 + sw_aframe=1 ** default: sw_aframe=0 + MC(<30,COOH,!0,COOH) \end{verbatim} \MCFgraph +\newpage %----------------------------------------------------------------------------- \subsection{Local parameter setting} \begin{verbatim} beginfont() - MCf(Ph) + MC(Ph) endfont beginfont() %-------------------------- ratio_thickness_bond:=0.05; %-------------------------- - MCf(Ph) + MC(Ph) endfont beginfont() - MCf(Ph) + MC(Ph) endfont \end{verbatim} \MCFgraph\MCFgraph\MCFgraph @@ -956,129 +983,89 @@ pk font,PNG,SVG,EPS or MDL MOL file. \subsection{Global parameter setting} \begin{verbatim} beginfont() - MCf(Ph) + MC(Ph) endfont %-------------------------- ratio_thickness_bond:=0.05; %-------------------------- beginfont() - MCf(Ph) + MC(Ph) endfont beginfont() - MCf(Ph) + MC(Ph) endfont \end{verbatim} \MCFgraph\MCFgraph\MCFgraph %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -\newpage \section{Function} -\subsection{Function MCd()} -\begin{verbatim} - (Draw molecule) - - MCd(a,b)(c,d)(...) - a: ratio molecular width/font width - b: ratio molecular hight/font hight - c: x axis position - d: y axis position - - beginfont() - MCd(1,0.8)(0.2,0.9)(<30,Ph,3:/F,4:/Cl) - MCd(1,0.8)(0.8,0.1)(<30,Ph,3:/F,4:/Cl) - endfont -\end{verbatim} -\MCFgraph %----------------------------------------------------------------------------- -\subsection{Function MCa()} +\subsection{Function MC()} \begin{verbatim} - (Draw molecule at (x,y)) - - MCa(a,b)(...) : MCd(1,1)(a,b)(...) - a: x axis position - b: y axis position + (Draw molecule) - beginfont() - MCa(0.2,0.5)(<30,Ph,3:/F,4:/Cl) - MCa(0.8,0.5)(<30,Ph,3:/F,4:/Cl) - endfont -\end{verbatim} -\MCFgraph -%----------------------------------------------------------------------------- -\subsection{Function MCc()} -\begin{verbatim} - (Draw molecule to center of font) + msize=(a,b) **default (1,1) + mposition=(c,d) **default (0.5,0.5) - MCc(a,b)(...) : MCd(a,b)(0.5,0.5)(...) - a: ratio molecular width/font width - b: ratio molecular hight/font hight + a: ratio molecular width/font width + b: ratio molecular hight/font hight + c: x axis position + d: y axis position beginfont() - MCc(1 ,1 )(?6) - MCc(0.75,0.75)(?6) - MCc(0.5 ,0.5 )(?6) + MC(<30,Ph,3:/F,4:/Cl) endfont \end{verbatim} \MCFgraph %----------------------------------------------------------------------------- -\subsection{Function MCf()} +\subsection{Function MCat()} \begin{verbatim} - (Draw molecule fit to font size) + (Draw molecule at mposition) - MCf(...) : MCd(1,1)(0.5,0.5)(...) + MCat(c,d)(....) : - (Draw molecule fit to font height) + mposition:=(c,d); + MC(....) - beginfont() - font_wd:=25mm; - font_ht:=15mm; - MCf(<30,Ph) - endfont -\end{verbatim} -\MCFgraph -\begin{verbatim} + c: x axis position + d: y axis position beginfont() - font_wd:=25mm; - font_ht:=15mm; - MCf(<90,Ph,3:/F,4:/Cl) + defaultsize:=5bp; + fsize:=(75mm,75mm); + fmargin:=(3mm,3mm); + blength:=0.07; + sw_fframe:=1; + mangle:=0; + for i=1 step -0.25 until 0: + for j=0 step 0.25 until 1: + MCat(j,i)(Ph,4:N) + ext( + drawarrow((A1 shifted (aw,0)) + rotated A1dir..A1); + label(decimal(mangle), + p0+(0.5w,0.5h)); + ) + mangle:=mangle+15; + endfor + endfor endfont -\end{verbatim} -\MCFgraph -\begin{verbatim} - - (Draw molecule fit to font width) - - beginfont() - font_wd:=15mm; - font_ht:=25mm; - MCf(<30,Ph) - endfont -\end{verbatim} -\MCFgraph -\begin{verbatim} - beginfont() - font_wd:=15mm; - font_ht:=25mm; - MCf(<30,Ph,3:/F,4:/Cl) - endfont \end{verbatim} \MCFgraph -%----------------------------------------------------------------------------- +%=============================================================================== \newpage \subsection{Function EXT()} \begin{verbatim} (Add extra graphic to font) - w: font width - h: font height - w0: font width-margin_left_right*2 - h0: font height-margin_top_bottom*2 - aw: atom font size - em: label font size - p0: x=margin_left_right - y=margin_top_bottom - n: molecular number + w: font width + h: font height + w0: font width-2xpart(fmargin) + h0: font height-2ypart(fmargin) + aw: atom font size + em: label font size + p0: fmargin + n: molecular number p[m]: molecular origin position w[m]: molecular width h[m]: molecular height @@ -1087,23 +1074,22 @@ pk font,PNG,SVG,EPS or MDL MOL file. %---------------------------------------- beginfont() - font_wd:=70mm; - font_ht:=30mm; + fsize:=(70mm,30mm;) ratio_bond_width:=0.065; sw_solid:=1; %--------------------------------------- - MCd(1,1)(0.1,0.5) + MCat(0.1,0.5) (<-210,60`1,60`1,60`1,{1,3}=dl, 1:/R1,4:/R2^-60) ext(defaultscale:=0.6; label.bot("Diene",p0+(0.5w,0));) %--------------------------------------- - MCd(1,1)(0.4,0.5) + MCat(0.4,0.5) (<-30,-60`1,1=dl,1:/R3,2:/R4^60) ext(defaultscale:=0.6; label.bot("Dienophile",p0+(0.5w,0));) %--------------------------------------- - MCd(1,1)(0.9,0.5) + MCat(0.9,0.5) (<30,?6,6=dl,2:/R2,3:/R4,4:/R3,5:/R1) %--------------------------------------- EXT( @@ -1126,8 +1112,8 @@ endfont w: molecular width h: molecular height - aw: atom font size - em: label font size + aw: atom font size + em: label font size p0: origin of molecular structure l: bond length An: atom number @@ -1141,17 +1127,17 @@ endfont %---------------------------------------- beginfont() - font_wd:=50mm; - font_ht:=20mm; + fsize:=(50mm,20mm); %--------------------------------------- - MCd(1,0.7)(0,0.5)(<30,?6,3=dl,4:/CH3) + msize:=(1,0.7); + MCat(0,0.5)(<30,?6,3=dl,4:/CH3) ext( label.top("+",A7); drawarrow B3{dir(B3dir-90)}.. {dir(B7dir+90)}0.4[B7s,B7e]; ) %--------------------------------------- - MCd(1,0.7)(1,0.5)(<30,?6,4://CH3) + MCat(1,0.5)(<30,?6,4://CH3) ext( labeloffset:=0bp; label.lrt("+",A3); @@ -1342,8 +1328,7 @@ drawarrow & drawdblarrow: input mcf2graph.mf; % input macro %------------------------------------------------------------------------- sw_aux_out:=1; % aux(information) file output on > Gloval setting -font_wd:=60mm; % font width > -font_ht:=40mm; % font height > +fsize:=(60mm,40mm); % (font width,font height) > var3:="cal_MW"; tag3:="cMW"; > AUX file table var4:="cal_FM"; tag4:="cFM"; > %%%% sw_rep_out:=1; > Report output @@ -1352,21 +1337,21 @@ outputformat:="png"; hppp:=vppp:=0.1; > PNG output outputtemplate:="%j-%3c.png"; > %------------------------------------------------------------------------- beginfont("NO:1","EN:Ampicillin") > begin font(information) - MCf(<45,?4,2:N,2=?5,-1:S, > begin MCF (1) + MC(<45,?4,2:N,2=?5,-1:S, > begin MCF (1) {3^45,4^-45}:/*H,1://O^15,5:/*COOH^-18, > {6^35,6^-35}:/_, > 4:@,75,NH,!,//O,!,/*NH,!,Ph) > end MCF endfont > end font %------------------------------------------------------------------------ beginfont("NO:2","EN:Cholesterol") > begin font(information) - MCf(<30,?6,{-4,-2}=?6,-4=?5,7=dl, > begin MCF (2) + MC(<30,?6,{-4,-2}=?6,-4=?5,7=dl, > begin MCF (2) 1:*/OH,{4,12}:*/_^60,9:*/H^60, > 10:/*H^180,{11,-1}:/*H^-60, > -1:@,17,/*_,!4,/_,!) > end MCF endfont > end font %------------------------------------------------------------------------ beginfont("NO:3","EN:Limonin") > begin font(information) - MCf(<30,?6,{-3,-4}=?6, > begin MCF (3) + MC(<30,?6,{-3,-4}=?6, > begin MCF (3) -5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, > {13,15,17,20}:O,{3,12,21}://O, > {4~wf^60,8~zf^60,18^35,18^-35}:/_, > @@ -1375,14 +1360,14 @@ beginfont("NO:3","EN:Limonin") > begin font(information) endfont > end font %------------------------------------------------------------------------ beginfont("NO:4","EN:beta-carotene) > begin font(information) - MCf(<30,?6,3=dl,{3,5^35,5^-35}:/_, > begin MCF (4) + MC(<30,?6,3=dl,{3,5^35,5^-35}:/_, > begin MCF (4) 4:\,|,!18,{1,3,5,7,9,11,13,15,17}=dr, > {3,7,12,16}:/_, > |,?6,6=dl,{6,2^35,2^-35}:/_) > end MCF endfont > end font %------------------------------------------------------------------------ beginfont("NO:5","EN:Gibberellin A3"); > begin font(information) - MCf(<18,?5,3=?7,5=?6[12], > begin MCF (5) + MC(<18,?5,3=?7,5=?6[12], > begin MCF (5) 8:@,160`1.3,3:#,13=dl,6=wf,8=wb, > 5:@,40~zf`1,O,60,//O^180,14~zb:#, > 2:/COOH,7://_,13:*/OH,8:/*OH, > @@ -1592,9 +1577,9 @@ M END \noindent% %-------------------------------------------------------------------- \begin{mplibcode} - font_wd:=50mm; font_ht:=50mm; + fsize:=(50mm,50mm); beginfont("NO:2","EN:Limonin","MW:470.51") - MCf(<30, + MC(<30, ?6,{-3,-4}=?6, -5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, {13,15,17,20}:O,{3,12,21}://O, @@ -1606,9 +1591,9 @@ M END \end{mplibcode}\\ %-------------------------------------------------------------------- \begin{mplibcode} - font_wd:=80mm; font_ht:=50mm; + fsize:=(80mm,50mm); beginfont("NO:3","EN:beta-carotene","MW:536.87") - MCf(<30, + MC(<30, ?6,3=dl,{3,5^35,5^-35}:/_, 4:\,|,!18,{1,3,5,7,9,11,13,15,17}=dr, {3,7,12,16}:/_, @@ -1618,9 +1603,9 @@ M END \end{mplibcode}\\ %-------------------------------------------------------------------- \begin{mplibcode} - font_wd:=50mm; font_ht:=50mm; + fsize:=(50mm,50mm); beginfont("NO:4","EN:Gibberellin A3","MW:346.37"); - MCf(<18,?5,3=?7,5=?6[12], + MC(<18,?5,3=?7,5=?6[12], 8:@,160`1.3,3:#,13=dl,6=wf,8=wb, 5:@,40~zf`1,O,60,//O^180,14~zb:#, 2:/COOH,7://_,13:*/OH,8:/*OH, diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf Binary files differindex c072d3ec6c4..62d1377278c 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex index 281cfb7c7e1..9d40f3fbcac 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex @@ -1,7 +1,7 @@ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% Example of MCF typest with LuaLaTeX(luamplib) by A.Yamaji 2019.02.11 +% Example of MCF typest with LuaLaTeX(luamplib) by A.Yamaji 2019.03.17 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -%%% mcf2graph.mf it must be version 4.36 or later +%%% mcf2graph.mf it must be version 4.40 or later \documentclass{article} %------------------------------------------------------------------------------ \usepackage{luamplib}% @@ -14,8 +14,8 @@ if unknown Ph1: input mcf2graph.mf; fi sw_aux_out:=1; sw_label_emu:=1; - sw_font_frame:=4; - max_bond_length:=4.5mm; + sw_fframe:=4; + max_blength:=4.5mm; defaultfont:="uhvr8r"; defaultsize:=8bp; defaultscale:=1; @@ -40,9 +40,10 @@ {{\tt MW(C) :} molecular weight calculated by mcf2graph\\ {{\tt MW(D) :} molecular weight from literature data\vspace{5mm}\\ \begin{mplibcode} - font_wd:=80mm; font_ht:=40mm; + fsize:=(80mm,40mm); beginfont("NO:1","EN:Chlorophyll a","MW:893.49") - MCd(.9,.9)(0,0.5)(<54, + msize:=(.9,.9); + MCat(0,0.5)(<54, |<=1,?5,{2,5}=dl,4:N,3:\,54~dl,|,?5,{2,4}=dl,5:N, -2:\,54~dl,|,?5,2=dl,5:N,-2:\~dl,54,|,?5,5=dl,5:N,-2:\~dl,$5:#, -1:@,24,/*COO!^15,72,//O,$1:#,>|, @@ -76,9 +77,10 @@ \vspace{7mm}\\ %---------------------------------------------------------------------------- \begin{mplibcode} -font_wd:=80mm; font_ht:=20mm; +fsize:=(80mm,20mm); beginfont("EN:beta-Carotene","MW:536.888") - MCd(.65,1)(.9,.5)( + msize:=(.65,1); + MCat(.9,.5)( <30,?6,3=dl,{3,5^35,5^-35}:/_, 4:\,|,!18,{1,3,5,7,9,11,13,15,17}=dr,{3,7,12,16}:/_, |,?6,6=dl,{6,2^35,2^-35}:/_ @@ -104,9 +106,9 @@ endfont \vspace{7mm}\\ %---------------------------------------------------------------------------- \begin{mplibcode} - font_wd:=80mm; font_ht:=30mm; + fsize:=(80mm,30mm); beginfont("NO:2","EN:Limonin","MW:470.51") - MCa(0.7,0.5)(<30, + MCat(0.7,0.5)(<30, ?6,{-3,-4}=?6,-5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, {13,15,17,20}:O,{3,12,21}://O, {4~wf^60,8~zf^60,18^35,18^-35}:/_,{1^60,5^180,16^60}:/*H, @@ -135,9 +137,9 @@ endfont \vspace{7mm}\\% %---------------------------------------------------------------------------- \begin{mplibcode} -font_wd:=80mm; font_ht:=20mm; +fsize:=(80mm,20mm); beginfont("NO:4","EN:Gibberellin A3","MW:346.37"); - MCa(0.8,0.5)( + MCat(0.8,0.5)( <18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#,13=dl,6=wf,8=wb, 5:@,40~zf`1,O,60,//O^180,14~zb:#, 2:/COOH,7://_,13:*/OH,8:/*OH,14:*/_,{1,4}:*/H^60) @@ -162,9 +164,9 @@ endfont; \vspace{7mm}\\ %---------------------------------------------------------------------------- \begin{mplibcode} -font_wd:=80mm; font_ht:=25mm; +fsize:=(80mm,25mm); beginfont("EN:Morphine","MW:285.343") - MCa(0.7,0.5)( + MCat(0.7,0.5)( <30,Ph,2=?6,-4=?6,(1,12)=?5[2],-1:O,-1=zb, 7:@,60~wf`0.75,70~si_`1.3,45,N,/_,9~wb:#, 15=d,6:/OH,8^180:*/H,12:/*OH @@ -191,9 +193,9 @@ endfont \vspace{7mm}\\ %---------------------------------------------------------------------------- \begin{mplibcode} -font_wd:=80mm; font_ht:=35mm; +fsize:=(80mm,35mm); beginfont("NO:5","EN:Erythromycin","MW:733.93"); - MCa(0.8,0.5)( + MCat(0.8,0.5)( <30,|<=1,<-120,60,60,60,-60,60,60,-60,60,60,60,-60,60,60,>|,1:#, 14:O,13:/*Et,{1,9}://O,{2,10}:*/_,{4,6^-35,8,12^35}:/*_, {6^35,11,12^-35}:*/OH, @@ -225,9 +227,9 @@ $5:\*^30`1.7,O,!,|,?6`.7,6:O, \vspace{7mm}\\ %---------------------------------------------------------------------------- \begin{mplibcode} -font_wd:=80mm; font_ht:=35mm; +fsize:=(80mm,35mm); beginfont("EN:Paclitaxel","MW:853.918") - MCa(0.8,0.5)( + MCat(0.8,0.5)( ?6,5=d,3:@,|<=1,36,45,45,45,45,>|,$5:#,-4=?6,-4=?4,||,-1=wb,-3=wf,-1:O, {4^35,4^-35,6}:/_,{3^-60,15}:*/OH,8:/*H^-60,9:*/_^60,10://O, $1:\,O,!,//O,!,*/OH,!,/Ph,60~wf,NH,-60,//O,60,Ph, @@ -258,9 +260,9 @@ $12:\*^-15,O,60,//O,-60) %---------------------------------------------------------------------------- \noindent \begin{mplibcode} -font_wd:=80mm; font_ht:=70mm; +fsize:=(80mm,70mm); beginfont("NO:6","EN:Vancomycin","MW:1449.25"); - MCa(0.9,0)( + MCat(0.9,0)( <30, |<=1,!12,{1,3,12}=zf,7=wf,/H^-60,60,*/OH,60, Ph,-4:/Cl,-3:\,O,!,Ph,-4:\,O,!,Ph,-1^15:/Cl,-3:\,/*OH,*/H^-60,$1:#, @@ -304,9 +306,9 @@ $23:\,O,!,|,?6`.7,2:O,3^10:/!OH,{4,5}:/OH, \vspace{10mm}\\% %---------------------------------------------------------------------------- \begin{mplibcode} - font_wd:=170mm; font_ht:=70mm; + fsize:=(170mm,70mm); beginfont("NO:7","EN:Maitotoxin","MW:3425.86") - MCf( + MC( <55.8,?6,-4=?7 ,{-4,-3,-3,-3}=?6,-3:\,!3,?6,{-4,-3,-3,-3}=?6,-3:\,?6,-3=?6, -3:\,!3,60,<-30,?6,-3=?6,-3:@,30,<30,?6,{-3,-3}=?6,-3=?7,{-4,-3,-3}=?6, -2:\,?6,-3=?6,-3=?7,{-3,-3}=?6,-3=?8,-3=dl,{-5,-3,-3,-3}=?6, @@ -355,20 +357,19 @@ $23:\,O,!,|,?6`.7,2:O,3^10:/!OH,{4,5}:/OH, \newpage \begin{mplibcode} beginfont("EN:TCA cycle") -font_wd:=160mm; -font_ht:=75mm; -max_bond_length:=5mm; +fsize:=(160mm,75mm); +max_blength:=5mm; %------------------------------------------------------------------------ -MCa(0.33, 1)(<30,O[-1],!0,//O,!,//O,!2,//O,!,O[-1]) -MCa(0.66, 1)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4`1:\,//O,!,O[-1],4:/OH^-165) -MCa(1, 1)(<30,O[-1],!0,//O,!2,!~dr,!,//O,!,O[-1],-4`1:\,//O,!,O[-1]) -MCa(1, 0.55)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4:\`1,//O,!,O[-1]) -MCa(1, 0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1],-4:\`1,//O,!,O[-1]) -MCa(0.66,0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1]) -MCa(0.33,0.05)(<30,O[-1],!0,//O,!3,//O,!,"{S-CoA}") -MCa(0, 0.05)(<30,O[-1],!0,//O,!3,//O,!,O[-1]) -MCa(0, 0.55)(<30,O[-1],!0,//O,!,!~dr,!,//O,!,O[-1]) -MCa(0, 1)(<30,O[-1],!0,//O,!3,//O,!,O[-1],3:/OH) +MCat(0.33, 1)(<30,O[-1],!0,//O,!,//O,!2,//O,!,O[-1]) +MCat(0.66, 1)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4`1:\,//O,!,O[-1],4:/OH^-165) +MCat(1, 1)(<30,O[-1],!0,//O,!2,!~dr,!,//O,!,O[-1],-4`1:\,//O,!,O[-1]) +MCat(1, 0.55)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(1, 0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(0.66,0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1]) +MCat(0.33,0.05)(<30,O[-1],!0,//O,!3,//O,!,"{S-CoA}") +MCat(0, 0.05)(<30,O[-1],!0,//O,!3,//O,!,O[-1]) +MCat(0, 0.55)(<30,O[-1],!0,//O,!,!~dr,!,//O,!,O[-1]) +MCat(0, 1)(<30,O[-1],!0,//O,!3,//O,!,O[-1],3:/OH) %------------------------------------------------------------------------- EXT( defaultfont:="uhvr8r"; @@ -416,19 +417,18 @@ endfont \end{mplibcode} \begin{verbatim} beginfont("EN:TCA cycle") -font_wd:=160mm; -font_ht:=75mm; -max_bond_length:=5mm; -MCa(0.33, 1)(<30,O[-1],!0,//O,!,//O,!2,//O,!,O[-1]) -MCa(0.66, 1)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4`1:\,//O,!,O[-1],4:/OH^-165) -MCa(1, 1)(<30,O[-1],!0,//O,!2,!~dr,!,//O,!,O[-1],-4`1:\,//O,!,O[-1]) -MCa(1, 0.55)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4:\`1,//O,!,O[-1]) -MCa(1, 0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1],-4:\`1,//O,!,O[-1]) -MCa(0.66,0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1]) -MCa(0.33,0.05)(<30,O[-1],!0,//O,!3,//O,!,"{S-CoA}") -MCa(0, 0.05)(<30,O[-1],!0,//O,!3,//O,!,O[-1]) -MCa(0, 0.55)(<30,O[-1],!0,//O,!,!~dr,!,//O,!,O[-1]) -MCa(0, 1)(<30,O[-1],!0,//O,!3,//O,!,O[-1],3:/OH) +fsize:=(160mm,75mm); +max_blength:=5mm; +MCat(0.33, 1)(<30,O[-1],!0,//O,!,//O,!2,//O,!,O[-1]) +MCat(0.66, 1)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4`1:\,//O,!,O[-1],4:/OH^-165) +MCat(1, 1)(<30,O[-1],!0,//O,!2,!~dr,!,//O,!,O[-1],-4`1:\,//O,!,O[-1]) +MCat(1, 0.55)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(1, 0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(0.66,0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1]) +MCat(0.33,0.05)(<30,O[-1],!0,//O,!3,//O,!,"{S-CoA}") +MCat(0, 0.05)(<30,O[-1],!0,//O,!3,//O,!,O[-1]) +MCat(0, 0.55)(<30,O[-1],!0,//O,!,!~dr,!,//O,!,O[-1]) +MCat(0, 1)(<30,O[-1],!0,//O,!3,//O,!,O[-1],3:/OH) EXT( defaultfont:="uhvr8r"; defaultscale:=0.75; @@ -458,5 +458,3 @@ endfont \end{verbatim} %---------------------------------------------------------------------------- \end{document} ---- -\end{document} |