diff options
Diffstat (limited to 'Master/texmf-dist/doc/latex/texshade')
| -rw-r--r-- | Master/texmf-dist/doc/latex/texshade/AQP2spec.ALN | 6 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/latex/texshade/AQPpro.MSF | 32 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/latex/texshade/README | 4 | ||||
| -rw-r--r-- | Master/texmf-dist/doc/latex/texshade/texshade.pdf | bin | 524908 -> 594129 bytes |
4 files changed, 18 insertions, 24 deletions
diff --git a/Master/texmf-dist/doc/latex/texshade/AQP2spec.ALN b/Master/texmf-dist/doc/latex/texshade/AQP2spec.ALN index 2c36822f0f8..8edd9e0ceff 100644 --- a/Master/texmf-dist/doc/latex/texshade/AQP2spec.ALN +++ b/Master/texmf-dist/doc/latex/texshade/AQP2spec.ALN @@ -1,10 +1,4 @@ -%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -%%%%% %%%%% -%%%%% This is a minimal .ALN file--many sequence aligners can produce them %%%%% -%%%%% %%%%% -%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% - AQP2bt SIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLAIGTLVQALGHVSGA AQP2cf SVAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHVSGA AQP2dd SIAFSRAVFSEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLAIGTLVQALGHISGA diff --git a/Master/texmf-dist/doc/latex/texshade/AQPpro.MSF b/Master/texmf-dist/doc/latex/texshade/AQPpro.MSF index 815bb157d66..aef0f2b0e06 100644 --- a/Master/texmf-dist/doc/latex/texshade/AQPpro.MSF +++ b/Master/texmf-dist/doc/latex/texshade/AQPpro.MSF @@ -28,23 +28,23 @@ AQP4.PRO YITAQCLGAIIGAGILYLV..........TPPSVVGGLGVTTVHGNLTAGH.....GLLV AQP5.PRO YVAAQLVGAIAGAGILYWL..........APLNARGNLAVNALNNNTTPGK.....AMVV 181 240 -AQP1.PRO EIIGTLQLVLCVLATTDR.RRRDLGGSAPLAIGLSV.ALGHLLAIDYTGCGINPARSFGS -AQP2.PRO ELFLTMQLVLCIFASTDE.RRGDNLGSPALSIGFSV.TLGHLLGIYFTGCSMNPARSLAP -AQP3.PRO QFIGTAALIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFN.SGYAVNPARDFGP -AQP4.PRO ELIITFQLVFTIFASCDS.KRTDVTGSVALAIGFSV.AIGHLFAINYTGASMNPARSFGP -AQP5.PRO ELILTFQLALCIFSSTDS.RRTSPVGSPALSIGLSV.TLGHLVGIYFTGCSMNPARSFGP +AQP1.PRO EIIGTLQLVLCVLATTDR.RRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSA +AQP2.PRO ELFLTMQLVLCIFASTDE.RRGDNLGSPALSIGFSVTLGHLLGIYFTGCSMNPARSLAPA +AQP3.PRO QFIGTAALIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPR +AQP4.PRO ELIITFQLVFTIFASCDS.KRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPA +AQP5.PRO ELILTFQLALCIFSSTDS.RRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPA 241 300 -AQP1.PRO AVLTR..NFS.N......HWIFWVGPFIGSALAVL..IYDFILAPRSSDFTDRMK..... -AQP2.PRO AVVTG..KFD.D......HWVFWIGPLVGAIIGSL..LYNYLLFPSAKSLQERL..AVLK -AQP3.PRO RLFTALAGWGSEVFTTGQNW..WWVPIVSPLLGSIGGVFVYQL................. -AQP4.PRO AVIMG..NWE.N......HWIYWVGPIIGAVLAGA..LYEYV.FCPDVELKRRLKEAFSK -AQP5.PRO AVVMN..RFSPS......HWVFWVGPIVGAMLAAI..LYFYLLFPSSLSLHDRV..AVVK +AQP1.PRO VLTR..NFS.N......HWIFWVGPFIGSALAVL..IYDFILAPRSSDFTDRMK...... +AQP2.PRO VVTG..KFD.D......HWVFWIGPLVGAIIGSL..LYNYLLFPSAKSLQERL..AVLKG +AQP3.PRO LFTALAGWGSEVFTTGQNW..WWVPIVSPLLGSIGGVFVYQL.................. +AQP4.PRO VIMG..NWE.N......HWIYWVGPIIGAVLAGA..LYEYV.FCPDVELKRRLKEAFSKA +AQP5.PRO VVMN..RFSPS......HWVFWVGPIVGAMLAAI..LYFYLLFPSSLSLHDRV..AVVKG - 301 356 -AQP1.PRO .......VWTS.....GQVEEYDLDAD.......DINSRVEMKPK........... -AQP2.PRO G.LEPDTDWEEREVRRRQ..SVELHSPQSLPRG...................SKA. -AQP3.PRO ..................MIGCHLEQPPPSTEAENV.KLAHMKHKE.......QI. -AQP4.PRO AAQQTKGSYMEVEDNRSQVETEDLILKPGVVHVIDIDRGDEKKGKDSSGEVLSSV. -AQP5.PRO GTYEPEEDWEDHREERKK..TIELTAH............................. + 301 354 +AQP1.PRO ......VWTS.....GQVEEYDLDAD.......DINSRVEMKPK.......... +AQP2.PRO .LEPDTDWEEREVRRRQ..SVELHSPQSLPRG...................SKA +AQP3.PRO .................MIGCHLEQPPPSTEAENV.KLAHMKHKE.......QI +AQP4.PRO AQQTKGSYMEVEDNRSQVETEDLILKPGVVHVIDIDRGDEKKGKDSSGEVLSSV +AQP5.PRO TYEPEEDWEDHREERKK..TIELTAH............................ diff --git a/Master/texmf-dist/doc/latex/texshade/README b/Master/texmf-dist/doc/latex/texshade/README index 752a63a8538..0fca2e6ccd3 100644 --- a/Master/texmf-dist/doc/latex/texshade/README +++ b/Master/texmf-dist/doc/latex/texshade/README @@ -1,4 +1,4 @@ - TeXshade v1.12 + TeXshade v1.15 >> >> A LaTeX package for setting nucleotide and peptide alignments. >> @@ -26,7 +26,7 @@ >> ding modes. TeXshade combines highest flexibility and the >> habitual TeX output quality--with reasonable time expenditure. >> - Copyright (C) 1999 - 2005 Eric Beitz + Copyright (C) 1999 - 2006 Eric Beitz diff --git a/Master/texmf-dist/doc/latex/texshade/texshade.pdf b/Master/texmf-dist/doc/latex/texshade/texshade.pdf Binary files differindex d4a4bcd4d81..3ac7cb76492 100644 --- a/Master/texmf-dist/doc/latex/texshade/texshade.pdf +++ b/Master/texmf-dist/doc/latex/texshade/texshade.pdf |