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+\documentclass[a4paper,12pt,openright,twoside]{adfathesis}
+\usepackage{dcolumn}
+\usepackage{graphicx}
+
+%-----------------------------------------------------------------------
+% Harvard citation style control.
+%-----------------------------------------------------------------------
+\citationstyle{agsm}
+\renewcommand{\harvardand}{and}
+
+%-----------------------------------------------------------------------
+% Setup Decimal column alignment (using dcolumn).
+%-----------------------------------------------------------------------
+
+\newcolumntype{d}[1]{D{.}{\cdot}{#1}}
+
+%-----------------------------------------------------------------------
+% Control included chapters here
+%-----------------------------------------------------------------------
+
+\includeonly{chapter2}
+
+\title{A fascinating thesis}
+\authornameonly{Fred Nerk}
+\author{\Authornameonly \\ B.Sc.}
+\copyrightfalse % Set true to get copyright page.
+\thesistype{Doctor of Philosophy} % Default value.
+\figurespagetrue % Set false to avoid list of figures.
+\tablespagefalse % Set true to get list of tables.
+
+\begin{document}
+
+\beforepreface
+% \declaration % Declaration page.
+\prefacesection{Abstract}
+ This thesis tells you all you need to know about...
+\prefaceseciton{Acknowledgements}
+ I would like to thank...
+\afterpreface
+
+%-----------------------------------------------------------------------
+% Begin thesis: use \include for each chapter as a separate file.
+%-----------------------------------------------------------------------
+
+% chapter 1
+\include{chapter1} % Introduction
+
+% chapter 2
+\include{chapter2}
+
+% chapter 3
+\include{chapter3}
+
+% chapter 6
+\include{chapter6} % Conclusions
+
+%-----------------------------------------------------------------------
+% Appendices: use \appendix switch to change to appendices.
+%-----------------------------------------------------------------------
+\appendix
+
+
+% First appendix
+\include{appendix1} % A long proof
+
+% Second Appendix
+\include{appendix2}
+
+
+%-----------------------------------------------------------------------
+% Bibliography: The clearpage is needed to get the page reference right.
+%-----------------------------------------------------------------------
+\clearpage
+\addcontentsline{toc}{chapter}{References}
+\bibliographystyle{adfathesis}
+\bibliography{mybib}
+
+\end{document}