lstbayes (23dec15)

git-svn-id: svn://tug.org/texlive/trunk@39183 c570f23f-e606-0410-a88d-b1316a301751

5 files changed, 795 insertions, 397 deletions

diff --git a/Master/texmf-dist/doc/latex/lstbayes/Makefile b/Master/texmf-dist/doc/latex/lstbayes/Makefile
index fd92ddab4e4..19e03455325 100644
--- a/Master/texmf-dist/doc/latex/lstbayes/Makefile
+++ b/Master/texmf-dist/doc/latex/lstbayes/Makefile
@@ -18,13 +18,13 @@ release: build pdf README.md
 	-rm lstbayes.zip
 	if [ -d lstbayes ]; then rm -rf ./lstbayes; fi
 	mkdir lstbayes
-	cp *.pdf *.ins *.dtx *.tex README.md Makefile lstbayes
+	cp lstbayes.pdf lstbayes.ins lstbayes.dtx examples.tex examples.pdf README.md Makefile lstbayes
 	zip -r lstbayes.zip lstbayes
 
 pdf: lstbayes.pdf examples.pdf
 
-lstbayes.dtx: lstbayes.dtx.mustache
-	$(PYTHON) lstbayes.py $< > $@
+lstbayes.dtx: lstbayes_template.dtx lstbayes.py
+	$(PYTHON) lstbayes.py $(pkgversion)
 
 lstbayes.sty: lstbayes.ins lstbayes.dtx
 	$(TEX) $<
diff --git a/Master/texmf-dist/doc/latex/lstbayes/examples.pdf b/Master/texmf-dist/doc/latex/lstbayes/examples.pdf
index 2d18ac1f480..54840b8f2e7 100644
--- a/Master/texmf-dist/doc/latex/lstbayes/examples.pdf
+++ b/Master/texmf-dist/doc/latex/lstbayes/examples.pdf
diff --git a/Master/texmf-dist/doc/latex/lstbayes/lstbayes.pdf b/Master/texmf-dist/doc/latex/lstbayes/lstbayes.pdf
index edcdd0195e3..435583d33eb 100644
--- a/Master/texmf-dist/doc/latex/lstbayes/lstbayes.pdf
+++ b/Master/texmf-dist/doc/latex/lstbayes/lstbayes.pdf
diff --git a/Master/texmf-dist/source/latex/lstbayes/lstbayes.dtx b/Master/texmf-dist/source/latex/lstbayes/lstbayes.dtx
index 8ccbfbf372a..e4f3cca9268 100644
--- a/Master/texmf-dist/source/latex/lstbayes/lstbayes.dtx
+++ b/Master/texmf-dist/source/latex/lstbayes/lstbayes.dtx
@@ -26,7 +26,7 @@
 %<package>\NeedsTeXFormat{LaTeX2e}[1999/12/01]
 %<package>\ProvidesPackage{lstbayes}
 %<*package>
-    [2015/09/27 lstbayes listings language drivers for BUGS, JAGS, and Stan]
+    [2015/12/22 lstbayes listings language drivers for BUGS, JAGS, and Stan]
 %</package>
 %
 %<*driver>
@@ -133,7 +133,7 @@
 % \subsection{Stan}
 %
 % Language driver for \href{http://mc-stan.org/}{Stan}.
-% The driver is based on Stan modeling language version \href{https://github.com/stan-dev/stan/releases/download/v2.8.0/stan-reference-2.8.0.pdf}{2.8.0} (Sept 8, 2015).
+% The driver is based on Stan modeling language version \href{https://github.com/stan-dev/stan/releases/download/v2.9.0/stan-reference-2.9.0.pdf}{2.9.0}.
 % 
 %    \begin{macrocode}
 \lstdefinelanguage{Stan}{
@@ -147,200 +147,400 @@
     coor_matrix,cov_matrix,%
     void},%
   morekeywords=[3]{%
-    Phi,Phi_approx,%
-    abs,acos,%
-    acosh,append_col,%
-    append_row,asin,%
-    asinh,atan,%
-    atan2,atanh,%
-    bernoulli_ccdf_log,bernoulli_cdf,%
-    bernoulli_cdf_log,bernoulli_log,%
-    bernoulli_logit_log,bernoulli_rng,%
-    bessel_first_kind,bessel_second_kind,%
-    beta_binomial_ccdf_log,beta_binomial_cdf,%
-    beta_binomial_cdf_log,beta_binomial_log,%
-    beta_binomial_rng,beta_ccdf_log,%
-    beta_cdf,beta_cdf_log,%
-    beta_log,beta_rng,%
-    binary_log_loss,binomial_ccdf_log,%
-    binomial_cdf,binomial_cdf_log,%
-    binomial_coefficient_log,binomial_log,%
-    binomial_logit_log,binomial_rng,%
-    block,categorical_log,%
-    categorical_logit_log,categorical_rng,%
-    cauchy_ccdf_log,cauchy_cdf,%
-    cauchy_cdf_log,cauchy_log,%
-    cauchy_rng,cbrt,%
-    ceil,chi_square_ccdf_log,%
-    chi_square_cdf,chi_square_cdf_log,%
-    chi_square_log,chi_square_rng,%
-    cholesky_decompose,col,%
-    cols,columns_dot_product,%
-    columns_dot_self,cos,%
-    cosh,crossprod,%
-    cumulative_sum,determinant,%
-    diag_matrix,diag_post_multiply,%
-    diag_pre_multiply,diagonal,%
-    digamma,dims,%
-    dirichlet_log,dirichlet_rng,%
-    distance,dot_product,%
-    dot_self,double_exponential_ccdf_log,%
-    double_exponential_cdf,double_exponential_cdf_log,%
-    double_exponential_log,double_exponential_rng,%
-    e,eigenvalues_sym,%
-    eigenvectors_sym,erf,%
-    erfc,exp,%
-    exp2,exp_mod_normal_ccdf_log,%
-    exp_mod_normal_cdf,exp_mod_normal_cdf_log,%
-    exp_mod_normal_log,exp_mod_normal_rng,%
-    expm1,exponential_ccdf_log,%
-    exponential_cdf,exponential_cdf_log,%
-    exponential_log,exponential_rng,%
-    fabs,falling_factorial,%
-    fdim,floor,%
-    fma,fmax,%
-    fmin,fmod,%
-    frechet_ccdf_log,frechet_cdf,%
-    frechet_cdf_log,frechet_log,%
-    frechet_rng,gamma_ccdf_log,%
-    gamma_cdf,gamma_cdf_log,%
-    gamma_log,gamma_p,%
-    gamma_q,gamma_rng,%
-    gaussian_dlm_obs_log,get_lp,%
-    gumbel_ccdf_log,gumbel_cdf,%
-    gumbel_cdf_log,gumbel_log,%
-    gumbel_rng,head,%
-    hypergeometric_log,hypergeometric_rng,%
-    hypot,if_else,%
-    int_step,inv,%
-    inv_chi_square_ccdf_log,inv_chi_square_cdf,%
-    inv_chi_square_cdf_log,inv_chi_square_log,%
-    inv_chi_square_rng,inv_cloglog,%
-    inv_gamma_ccdf_log,inv_gamma_cdf,%
-    inv_gamma_cdf_log,inv_gamma_log,%
-    inv_gamma_rng,inv_logit,%
-    inv_sqrt,inv_square,%
-    inv_wishart_log,inv_wishart_rng,%
-    inverse,inverse_spd,%
-    is_inf,is_nan,%
-    lbeta,lgamma,%
-    lkj_corr_cholesky_log,lkj_corr_cholesky_rng,%
-    lkj_corr_log,lkj_corr_rng,%
-    lmgamma,log,%
-    log10,log1m,%
-    log1m_exp,log1m_inv_logit,%
-    log1p,log1p_exp,%
-    log2,log_determinant,%
-    log_diff_exp,log_falling_factorial,%
-    log_inv_logit,log_mix,%
-    log_rising_factorial,log_softmax,%
-    log_sum_exp,logistic_ccdf_log,%
-    logistic_cdf,logistic_cdf_log,%
-    logistic_log,logistic_rng,%
-    logit,lognormal_ccdf_log,%
-    lognormal_cdf,lognormal_cdf_log,%
-    lognormal_log,lognormal_rng,%
-    machine_precision,max,%
-    mdivide_left_tri_low,mdivide_right_tri_low,%
-    mean,min,%
-    modified_bessel_first_kind,modified_bessel_second_kind,%
-    multi_gp_cholesky_log,multi_gp_log,%
-    multi_normal_cholesky_log,multi_normal_cholesky_rng,%
-    multi_normal_log,multi_normal_prec_log,%
-    multi_normal_rng,multi_student_t_log,%
-    multi_student_t_rng,multinomial_log,%
-    multinomial_rng,multiply_log,%
-    multiply_lower_tri_self_transpose,neg_binomial_2_ccdf_log,%
-    neg_binomial_2_cdf,neg_binomial_2_cdf_log,%
-    neg_binomial_2_log,neg_binomial_2_log_log,%
-    neg_binomial_2_log_rng,neg_binomial_2_rng,%
-    neg_binomial_ccdf_log,neg_binomial_cdf,%
-    neg_binomial_cdf_log,neg_binomial_log,%
-    neg_binomial_rng,negative_infinity,%
-    normal_ccdf_log,normal_cdf,%
-    normal_cdf_log,normal_log,%
-    normal_rng,not_a_number,%
-    num_elements,ordered_logistic_log,%
-    ordered_logistic_rng,owens_t,%
-    pareto_ccdf_log,pareto_cdf,%
-    pareto_cdf_log,pareto_log,%
-    pareto_rng,pareto_type_2_ccdf_log,%
-    pareto_type_2_cdf,pareto_type_2_cdf_log,%
-    pareto_type_2_log,pareto_type_2_rng,%
-    pi,poisson_ccdf_log,%
-    poisson_cdf,poisson_cdf_log,%
-    poisson_log,poisson_log_log,%
-    poisson_log_rng,poisson_rng,%
-    positive_infinity,pow,%
-    prod,qr_Q,%
-    qr_R,quad_form,%
-    quad_form_diag,quad_form_sym,%
-    rank,rayleigh_ccdf_log,%
-    rayleigh_cdf,rayleigh_cdf_log,%
-    rayleigh_log,rayleigh_rng,%
-    rep_array,rep_matrix,%
-    rep_row_vector,rep_vector,%
-    rising_factorial,round,%
-    row,rows,%
-    rows_dot_product,rows_dot_self,%
-    scaled_inv_chi_square_ccdf_log,scaled_inv_chi_square_cdf,%
-    scaled_inv_chi_square_cdf_log,scaled_inv_chi_square_log,%
-    scaled_inv_chi_square_rng,sd,%
-    segment,sin,%
-    singular_values,sinh,%
-    size,skew_normal_ccdf_log,%
-    skew_normal_cdf,skew_normal_cdf_log,%
-    skew_normal_log,skew_normal_rng,%
-    softmax,sort_asc,%
-    sort_desc,sort_indices_asc,%
-    sort_indices_desc,sqrt,%
-    sqrt2,square,%
-    squared_distance,step,%
-    student_t_ccdf_log,student_t_cdf,%
-    student_t_cdf_log,student_t_log,%
-    student_t_rng,sub_col,%
-    sub_row,sum,%
-    tail,tan,%
-    tanh,tcrossprod,%
-    tgamma,to_array_1d,%
-    to_array_2d,to_matrix,%
-    to_row_vector,to_vector,%
-    trace,trace_gen_quad_form,%
-    trace_quad_form,trigamma,%
-    trunc,uniform_ccdf_log,%
-    uniform_cdf,uniform_cdf_log,%
-    uniform_log,uniform_rng,%
-    variance,von_mises_log,%
-    von_mises_rng,weibull_ccdf_log,%
-    weibull_cdf,weibull_cdf_log,%
-    weibull_log,weibull_rng,%
-    wiener_log,wishart_log,%
-    wishart_rng,bernoulli,%
-    bernoulli_logit,beta,%
-    beta_binomial,binomial,%
-    binomial_logit,categorical,%
-    categorical_logit,cauchy,%
-    chi_square,dirichlet,%
-    double_exponential,exp_mod_normal,%
-    exponential,frechet,%
-    gamma,gaussian_dlm_obs,%
-    gumbel,hypergeometric,%
-    inv_chi_square,inv_gamma,%
-    inv_wishart,lkj_corr,%
-    lkj_corr_cholesky,logistic,%
-    lognormal,multi_gp,%
-    multi_gp_cholesky,multi_normal,%
-    multi_normal_cholesky,multi_normal_prec,%
-    multi_student_t,multinomial,%
-    neg_binomial,neg_binomial_2,%
-    neg_binomial_2_log,normal,%
-    ordered_logistic,pareto,%
-    pareto_type_2,poisson,%
-    poisson_log,rayleigh,%
-    scaled_inv_chi_square,skew_normal,%
-    student_t,uniform,%
-    von_mises,weibull,%
-    wiener,wishart%
+    Phi,%
+    Phi_approx,%
+    abs,%
+    acos,%
+    acosh,%
+    append_col,%
+    append_row,%
+    asin,%
+    asinh,%
+    atan,%
+    atan2,%
+    atanh,%
+    bernoulli,%
+    bernoulli_ccdf_log,%
+    bernoulli_cdf,%
+    bernoulli_cdf_log,%
+    bernoulli_log,%
+    bernoulli_logit,%
+    bernoulli_logit_log,%
+    bernoulli_rng,%
+    bessel_first_kind,%
+    bessel_second_kind,%
+    beta,%
+    beta_binomial,%
+    beta_binomial_ccdf_log,%
+    beta_binomial_cdf,%
+    beta_binomial_cdf_log,%
+    beta_binomial_log,%
+    beta_binomial_rng,%
+    beta_ccdf_log,%
+    beta_cdf,%
+    beta_cdf_log,%
+    beta_log,%
+    beta_rng,%
+    binary_log_loss,%
+    binomial,%
+    binomial_ccdf_log,%
+    binomial_cdf,%
+    binomial_cdf_log,%
+    binomial_coefficient_log,%
+    binomial_log,%
+    binomial_logit,%
+    binomial_logit_log,%
+    binomial_rng,%
+    block,%
+    categorical,%
+    categorical_log,%
+    categorical_logit,%
+    categorical_logit_log,%
+    categorical_rng,%
+    cauchy,%
+    cauchy_ccdf_log,%
+    cauchy_cdf,%
+    cauchy_cdf_log,%
+    cauchy_log,%
+    cauchy_rng,%
+    cbrt,%
+    ceil,%
+    chi_square,%
+    chi_square_ccdf_log,%
+    chi_square_cdf,%
+    chi_square_cdf_log,%
+    chi_square_log,%
+    chi_square_rng,%
+    cholesky_decompose,%
+    col,%
+    cols,%
+    columns_dot_product,%
+    columns_dot_self,%
+    cos,%
+    cosh,%
+    crossprod,%
+    csr_extract_u,%
+    csr_extract_v,%
+    csr_extract_w,%
+    csr_matrix_times_vector,%
+    csr_to_dense_matrix,%
+    cumulative_sum,%
+    determinant,%
+    diag_matrix,%
+    diag_post_multiply,%
+    diag_pre_multiply,%
+    diagonal,%
+    digamma,%
+    dims,%
+    dirichlet,%
+    dirichlet_log,%
+    dirichlet_rng,%
+    distance,%
+    dot_product,%
+    dot_self,%
+    double_exponential,%
+    double_exponential_ccdf_log,%
+    double_exponential_cdf,%
+    double_exponential_cdf_log,%
+    double_exponential_log,%
+    double_exponential_rng,%
+    e,%
+    eigenvalues_sym,%
+    eigenvectors_sym,%
+    erf,%
+    erfc,%
+    exp,%
+    exp2,%
+    exp_mod_normal,%
+    exp_mod_normal_ccdf_log,%
+    exp_mod_normal_cdf,%
+    exp_mod_normal_cdf_log,%
+    exp_mod_normal_log,%
+    exp_mod_normal_rng,%
+    expm1,%
+    exponential,%
+    exponential_ccdf_log,%
+    exponential_cdf,%
+    exponential_cdf_log,%
+    exponential_log,%
+    exponential_rng,%
+    fabs,%
+    falling_factorial,%
+    fdim,%
+    floor,%
+    fma,%
+    fmax,%
+    fmin,%
+    fmod,%
+    frechet,%
+    frechet_ccdf_log,%
+    frechet_cdf,%
+    frechet_cdf_log,%
+    frechet_log,%
+    frechet_rng,%
+    gamma,%
+    gamma_ccdf_log,%
+    gamma_cdf,%
+    gamma_cdf_log,%
+    gamma_log,%
+    gamma_p,%
+    gamma_q,%
+    gamma_rng,%
+    gaussian_dlm_obs,%
+    gaussian_dlm_obs_log,%
+    get_lp,%
+    gumbel,%
+    gumbel_ccdf_log,%
+    gumbel_cdf,%
+    gumbel_cdf_log,%
+    gumbel_log,%
+    gumbel_rng,%
+    head,%
+    hypergeometric,%
+    hypergeometric_log,%
+    hypergeometric_rng,%
+    hypot,%
+    if_else,%
+    int_step,%
+    inv,%
+    inv_chi_square,%
+    inv_chi_square_ccdf_log,%
+    inv_chi_square_cdf,%
+    inv_chi_square_cdf_log,%
+    inv_chi_square_log,%
+    inv_chi_square_rng,%
+    inv_cloglog,%
+    inv_gamma,%
+    inv_gamma_ccdf_log,%
+    inv_gamma_cdf,%
+    inv_gamma_cdf_log,%
+    inv_gamma_log,%
+    inv_gamma_rng,%
+    inv_logit,%
+    inv_phi,%
+    inv_sqrt,%
+    inv_square,%
+    inv_wishart,%
+    inv_wishart_log,%
+    inv_wishart_rng,%
+    inverse,%
+    inverse_spd,%
+    is_inf,%
+    is_nan,%
+    lbeta,%
+    lgamma,%
+    lkj_corr,%
+    lkj_corr_cholesky,%
+    lkj_corr_cholesky_log,%
+    lkj_corr_cholesky_rng,%
+    lkj_corr_log,%
+    lkj_corr_rng,%
+    lmgamma,%
+    log,%
+    log10,%
+    log1m,%
+    log1m_exp,%
+    log1m_inv_logit,%
+    log1p,%
+    log1p_exp,%
+    log2,%
+    log_determinant,%
+    log_diff_exp,%
+    log_falling_factorial,%
+    log_inv_logit,%
+    log_mix,%
+    log_rising_factorial,%
+    log_softmax,%
+    log_sum_exp,%
+    logistic,%
+    logistic_ccdf_log,%
+    logistic_cdf,%
+    logistic_cdf_log,%
+    logistic_log,%
+    logistic_rng,%
+    logit,%
+    lognormal,%
+    lognormal_ccdf_log,%
+    lognormal_cdf,%
+    lognormal_cdf_log,%
+    lognormal_log,%
+    lognormal_rng,%
+    machine_precision,%
+    max,%
+    mdivide_left_tri_low,%
+    mdivide_right_tri_low,%
+    mean,%
+    min,%
+    modified_bessel_first_kind,%
+    modified_bessel_second_kind,%
+    multi_gp,%
+    multi_gp_cholesky,%
+    multi_gp_cholesky_log,%
+    multi_gp_log,%
+    multi_normal,%
+    multi_normal_cholesky,%
+    multi_normal_cholesky_log,%
+    multi_normal_cholesky_rng,%
+    multi_normal_log,%
+    multi_normal_prec,%
+    multi_normal_prec_log,%
+    multi_normal_rng,%
+    multi_student_t,%
+    multi_student_t_log,%
+    multi_student_t_rng,%
+    multinomial,%
+    multinomial_log,%
+    multinomial_rng,%
+    multiply_log,%
+    multiply_lower_tri_self_transpose,%
+    neg_binomial,%
+    neg_binomial_2,%
+    neg_binomial_2_ccdf_log,%
+    neg_binomial_2_cdf,%
+    neg_binomial_2_cdf_log,%
+    neg_binomial_2_log,%
+    neg_binomial_2_log,%
+    neg_binomial_2_log_log,%
+    neg_binomial_2_log_rng,%
+    neg_binomial_2_rng,%
+    neg_binomial_ccdf_log,%
+    neg_binomial_cdf,%
+    neg_binomial_cdf_log,%
+    neg_binomial_log,%
+    neg_binomial_rng,%
+    negative_infinity,%
+    normal,%
+    normal_ccdf_log,%
+    normal_cdf,%
+    normal_cdf_log,%
+    normal_log,%
+    normal_rng,%
+    not_a_number,%
+    num_elements,%
+    ordered_logistic,%
+    ordered_logistic_log,%
+    ordered_logistic_rng,%
+    owens_t,%
+    pareto,%
+    pareto_ccdf_log,%
+    pareto_cdf,%
+    pareto_cdf_log,%
+    pareto_log,%
+    pareto_rng,%
+    pareto_type_2,%
+    pareto_type_2_ccdf_log,%
+    pareto_type_2_cdf,%
+    pareto_type_2_cdf_log,%
+    pareto_type_2_log,%
+    pareto_type_2_rng,%
+    pi,%
+    poisson,%
+    poisson_ccdf_log,%
+    poisson_cdf,%
+    poisson_cdf_log,%
+    poisson_log,%
+    poisson_log,%
+    poisson_log_log,%
+    poisson_log_rng,%
+    poisson_rng,%
+    positive_infinity,%
+    pow,%
+    prod,%
+    qr_Q,%
+    qr_R,%
+    quad_form,%
+    quad_form_diag,%
+    quad_form_sym,%
+    rank,%
+    rayleigh,%
+    rayleigh_ccdf_log,%
+    rayleigh_cdf,%
+    rayleigh_cdf_log,%
+    rayleigh_log,%
+    rayleigh_rng,%
+    rep_array,%
+    rep_matrix,%
+    rep_row_vector,%
+    rep_vector,%
+    rising_factorial,%
+    round,%
+    row,%
+    rows,%
+    rows_dot_product,%
+    rows_dot_self,%
+    scaled_inv_chi_square,%
+    scaled_inv_chi_square_ccdf_log,%
+    scaled_inv_chi_square_cdf,%
+    scaled_inv_chi_square_cdf_log,%
+    scaled_inv_chi_square_log,%
+    scaled_inv_chi_square_rng,%
+    sd,%
+    segment,%
+    sin,%
+    singular_values,%
+    sinh,%
+    size,%
+    skew_normal,%
+    skew_normal_ccdf_log,%
+    skew_normal_cdf,%
+    skew_normal_cdf_log,%
+    skew_normal_log,%
+    skew_normal_rng,%
+    softmax,%
+    sort_asc,%
+    sort_desc,%
+    sort_indices_asc,%
+    sort_indices_desc,%
+    sqrt,%
+    sqrt2,%
+    square,%
+    squared_distance,%
+    step,%
+    student_t,%
+    student_t_ccdf_log,%
+    student_t_cdf,%
+    student_t_cdf_log,%
+    student_t_log,%
+    student_t_rng,%
+    sub_col,%
+    sub_row,%
+    sum,%
+    tail,%
+    tan,%
+    tanh,%
+    tcrossprod,%
+    tgamma,%
+    to_array_1d,%
+    to_array_2d,%
+    to_matrix,%
+    to_row_vector,%
+    to_vector,%
+    trace,%
+    trace_gen_quad_form,%
+    trace_quad_form,%
+    trigamma,%
+    trunc,%
+    uniform,%
+    uniform_ccdf_log,%
+    uniform_cdf,%
+    uniform_cdf_log,%
+    uniform_log,%
+    uniform_rng,%
+    variance,%
+    von_mises,%
+    von_mises_log,%
+    von_mises_rng,%
+    weibull,%
+    weibull_ccdf_log,%
+    weibull_cdf,%
+    weibull_cdf_log,%
+    weibull_log,%
+    weibull_rng,%
+    wiener,%
+    wiener_log,%
+    wishart,%
+    wishart_log,%
+    wishart_rng
   },%
   otherkeywords={<-,~},%
   sensitive=true,%
@@ -357,5 +557,4 @@
 %</package>
 % \fi
 %
-% \Finale
-
+% \Finale
\ No newline at end of file
diff --git a/Master/texmf-dist/tex/latex/lstbayes/lstbayes.sty b/Master/texmf-dist/tex/latex/lstbayes/lstbayes.sty
index 9fd906d639e..3cb10d52155 100644
--- a/Master/texmf-dist/tex/latex/lstbayes/lstbayes.sty
+++ b/Master/texmf-dist/tex/latex/lstbayes/lstbayes.sty
@@ -22,7 +22,7 @@
 %% 
 \NeedsTeXFormat{LaTeX2e}[1999/12/01]
 \ProvidesPackage{lstbayes}
-    [2015/09/27 lstbayes listings language drivers for BUGS, JAGS, and Stan]
+    [2015/12/22 lstbayes listings language drivers for BUGS, JAGS, and Stan]
 
 \RequirePackage{listings}
 \lstdefinelanguage{BUGS}{
@@ -50,200 +50,400 @@
     coor_matrix,cov_matrix,%
     void},%
   morekeywords=[3]{%
-    Phi,Phi_approx,%
-    abs,acos,%
-    acosh,append_col,%
-    append_row,asin,%
-    asinh,atan,%
-    atan2,atanh,%
-    bernoulli_ccdf_log,bernoulli_cdf,%
-    bernoulli_cdf_log,bernoulli_log,%
-    bernoulli_logit_log,bernoulli_rng,%
-    bessel_first_kind,bessel_second_kind,%
-    beta_binomial_ccdf_log,beta_binomial_cdf,%
-    beta_binomial_cdf_log,beta_binomial_log,%
-    beta_binomial_rng,beta_ccdf_log,%
-    beta_cdf,beta_cdf_log,%
-    beta_log,beta_rng,%
-    binary_log_loss,binomial_ccdf_log,%
-    binomial_cdf,binomial_cdf_log,%
-    binomial_coefficient_log,binomial_log,%
-    binomial_logit_log,binomial_rng,%
-    block,categorical_log,%
-    categorical_logit_log,categorical_rng,%
-    cauchy_ccdf_log,cauchy_cdf,%
-    cauchy_cdf_log,cauchy_log,%
-    cauchy_rng,cbrt,%
-    ceil,chi_square_ccdf_log,%
-    chi_square_cdf,chi_square_cdf_log,%
-    chi_square_log,chi_square_rng,%
-    cholesky_decompose,col,%
-    cols,columns_dot_product,%
-    columns_dot_self,cos,%
-    cosh,crossprod,%
-    cumulative_sum,determinant,%
-    diag_matrix,diag_post_multiply,%
-    diag_pre_multiply,diagonal,%
-    digamma,dims,%
-    dirichlet_log,dirichlet_rng,%
-    distance,dot_product,%
-    dot_self,double_exponential_ccdf_log,%
-    double_exponential_cdf,double_exponential_cdf_log,%
-    double_exponential_log,double_exponential_rng,%
-    e,eigenvalues_sym,%
-    eigenvectors_sym,erf,%
-    erfc,exp,%
-    exp2,exp_mod_normal_ccdf_log,%
-    exp_mod_normal_cdf,exp_mod_normal_cdf_log,%
-    exp_mod_normal_log,exp_mod_normal_rng,%
-    expm1,exponential_ccdf_log,%
-    exponential_cdf,exponential_cdf_log,%
-    exponential_log,exponential_rng,%
-    fabs,falling_factorial,%
-    fdim,floor,%
-    fma,fmax,%
-    fmin,fmod,%
-    frechet_ccdf_log,frechet_cdf,%
-    frechet_cdf_log,frechet_log,%
-    frechet_rng,gamma_ccdf_log,%
-    gamma_cdf,gamma_cdf_log,%
-    gamma_log,gamma_p,%
-    gamma_q,gamma_rng,%
-    gaussian_dlm_obs_log,get_lp,%
-    gumbel_ccdf_log,gumbel_cdf,%
-    gumbel_cdf_log,gumbel_log,%
-    gumbel_rng,head,%
-    hypergeometric_log,hypergeometric_rng,%
-    hypot,if_else,%
-    int_step,inv,%
-    inv_chi_square_ccdf_log,inv_chi_square_cdf,%
-    inv_chi_square_cdf_log,inv_chi_square_log,%
-    inv_chi_square_rng,inv_cloglog,%
-    inv_gamma_ccdf_log,inv_gamma_cdf,%
-    inv_gamma_cdf_log,inv_gamma_log,%
-    inv_gamma_rng,inv_logit,%
-    inv_sqrt,inv_square,%
-    inv_wishart_log,inv_wishart_rng,%
-    inverse,inverse_spd,%
-    is_inf,is_nan,%
-    lbeta,lgamma,%
-    lkj_corr_cholesky_log,lkj_corr_cholesky_rng,%
-    lkj_corr_log,lkj_corr_rng,%
-    lmgamma,log,%
-    log10,log1m,%
-    log1m_exp,log1m_inv_logit,%
-    log1p,log1p_exp,%
-    log2,log_determinant,%
-    log_diff_exp,log_falling_factorial,%
-    log_inv_logit,log_mix,%
-    log_rising_factorial,log_softmax,%
-    log_sum_exp,logistic_ccdf_log,%
-    logistic_cdf,logistic_cdf_log,%
-    logistic_log,logistic_rng,%
-    logit,lognormal_ccdf_log,%
-    lognormal_cdf,lognormal_cdf_log,%
-    lognormal_log,lognormal_rng,%
-    machine_precision,max,%
-    mdivide_left_tri_low,mdivide_right_tri_low,%
-    mean,min,%
-    modified_bessel_first_kind,modified_bessel_second_kind,%
-    multi_gp_cholesky_log,multi_gp_log,%
-    multi_normal_cholesky_log,multi_normal_cholesky_rng,%
-    multi_normal_log,multi_normal_prec_log,%
-    multi_normal_rng,multi_student_t_log,%
-    multi_student_t_rng,multinomial_log,%
-    multinomial_rng,multiply_log,%
-    multiply_lower_tri_self_transpose,neg_binomial_2_ccdf_log,%
-    neg_binomial_2_cdf,neg_binomial_2_cdf_log,%
-    neg_binomial_2_log,neg_binomial_2_log_log,%
-    neg_binomial_2_log_rng,neg_binomial_2_rng,%
-    neg_binomial_ccdf_log,neg_binomial_cdf,%
-    neg_binomial_cdf_log,neg_binomial_log,%
-    neg_binomial_rng,negative_infinity,%
-    normal_ccdf_log,normal_cdf,%
-    normal_cdf_log,normal_log,%
-    normal_rng,not_a_number,%
-    num_elements,ordered_logistic_log,%
-    ordered_logistic_rng,owens_t,%
-    pareto_ccdf_log,pareto_cdf,%
-    pareto_cdf_log,pareto_log,%
-    pareto_rng,pareto_type_2_ccdf_log,%
-    pareto_type_2_cdf,pareto_type_2_cdf_log,%
-    pareto_type_2_log,pareto_type_2_rng,%
-    pi,poisson_ccdf_log,%
-    poisson_cdf,poisson_cdf_log,%
-    poisson_log,poisson_log_log,%
-    poisson_log_rng,poisson_rng,%
-    positive_infinity,pow,%
-    prod,qr_Q,%
-    qr_R,quad_form,%
-    quad_form_diag,quad_form_sym,%
-    rank,rayleigh_ccdf_log,%
-    rayleigh_cdf,rayleigh_cdf_log,%
-    rayleigh_log,rayleigh_rng,%
-    rep_array,rep_matrix,%
-    rep_row_vector,rep_vector,%
-    rising_factorial,round,%
-    row,rows,%
-    rows_dot_product,rows_dot_self,%
-    scaled_inv_chi_square_ccdf_log,scaled_inv_chi_square_cdf,%
-    scaled_inv_chi_square_cdf_log,scaled_inv_chi_square_log,%
-    scaled_inv_chi_square_rng,sd,%
-    segment,sin,%
-    singular_values,sinh,%
-    size,skew_normal_ccdf_log,%
-    skew_normal_cdf,skew_normal_cdf_log,%
-    skew_normal_log,skew_normal_rng,%
-    softmax,sort_asc,%
-    sort_desc,sort_indices_asc,%
-    sort_indices_desc,sqrt,%
-    sqrt2,square,%
-    squared_distance,step,%
-    student_t_ccdf_log,student_t_cdf,%
-    student_t_cdf_log,student_t_log,%
-    student_t_rng,sub_col,%
-    sub_row,sum,%
-    tail,tan,%
-    tanh,tcrossprod,%
-    tgamma,to_array_1d,%
-    to_array_2d,to_matrix,%
-    to_row_vector,to_vector,%
-    trace,trace_gen_quad_form,%
-    trace_quad_form,trigamma,%
-    trunc,uniform_ccdf_log,%
-    uniform_cdf,uniform_cdf_log,%
-    uniform_log,uniform_rng,%
-    variance,von_mises_log,%
-    von_mises_rng,weibull_ccdf_log,%
-    weibull_cdf,weibull_cdf_log,%
-    weibull_log,weibull_rng,%
-    wiener_log,wishart_log,%
-    wishart_rng,bernoulli,%
-    bernoulli_logit,beta,%
-    beta_binomial,binomial,%
-    binomial_logit,categorical,%
-    categorical_logit,cauchy,%
-    chi_square,dirichlet,%
-    double_exponential,exp_mod_normal,%
-    exponential,frechet,%
-    gamma,gaussian_dlm_obs,%
-    gumbel,hypergeometric,%
-    inv_chi_square,inv_gamma,%
-    inv_wishart,lkj_corr,%
-    lkj_corr_cholesky,logistic,%
-    lognormal,multi_gp,%
-    multi_gp_cholesky,multi_normal,%
-    multi_normal_cholesky,multi_normal_prec,%
-    multi_student_t,multinomial,%
-    neg_binomial,neg_binomial_2,%
-    neg_binomial_2_log,normal,%
-    ordered_logistic,pareto,%
-    pareto_type_2,poisson,%
-    poisson_log,rayleigh,%
-    scaled_inv_chi_square,skew_normal,%
-    student_t,uniform,%
-    von_mises,weibull,%
-    wiener,wishart%
+    Phi,%
+    Phi_approx,%
+    abs,%
+    acos,%
+    acosh,%
+    append_col,%
+    append_row,%
+    asin,%
+    asinh,%
+    atan,%
+    atan2,%
+    atanh,%
+    bernoulli,%
+    bernoulli_ccdf_log,%
+    bernoulli_cdf,%
+    bernoulli_cdf_log,%
+    bernoulli_log,%
+    bernoulli_logit,%
+    bernoulli_logit_log,%
+    bernoulli_rng,%
+    bessel_first_kind,%
+    bessel_second_kind,%
+    beta,%
+    beta_binomial,%
+    beta_binomial_ccdf_log,%
+    beta_binomial_cdf,%
+    beta_binomial_cdf_log,%
+    beta_binomial_log,%
+    beta_binomial_rng,%
+    beta_ccdf_log,%
+    beta_cdf,%
+    beta_cdf_log,%
+    beta_log,%
+    beta_rng,%
+    binary_log_loss,%
+    binomial,%
+    binomial_ccdf_log,%
+    binomial_cdf,%
+    binomial_cdf_log,%
+    binomial_coefficient_log,%
+    binomial_log,%
+    binomial_logit,%
+    binomial_logit_log,%
+    binomial_rng,%
+    block,%
+    categorical,%
+    categorical_log,%
+    categorical_logit,%
+    categorical_logit_log,%
+    categorical_rng,%
+    cauchy,%
+    cauchy_ccdf_log,%
+    cauchy_cdf,%
+    cauchy_cdf_log,%
+    cauchy_log,%
+    cauchy_rng,%
+    cbrt,%
+    ceil,%
+    chi_square,%
+    chi_square_ccdf_log,%
+    chi_square_cdf,%
+    chi_square_cdf_log,%
+    chi_square_log,%
+    chi_square_rng,%
+    cholesky_decompose,%
+    col,%
+    cols,%
+    columns_dot_product,%
+    columns_dot_self,%
+    cos,%
+    cosh,%
+    crossprod,%
+    csr_extract_u,%
+    csr_extract_v,%
+    csr_extract_w,%
+    csr_matrix_times_vector,%
+    csr_to_dense_matrix,%
+    cumulative_sum,%
+    determinant,%
+    diag_matrix,%
+    diag_post_multiply,%
+    diag_pre_multiply,%
+    diagonal,%
+    digamma,%
+    dims,%
+    dirichlet,%
+    dirichlet_log,%
+    dirichlet_rng,%
+    distance,%
+    dot_product,%
+    dot_self,%
+    double_exponential,%
+    double_exponential_ccdf_log,%
+    double_exponential_cdf,%
+    double_exponential_cdf_log,%
+    double_exponential_log,%
+    double_exponential_rng,%
+    e,%
+    eigenvalues_sym,%
+    eigenvectors_sym,%
+    erf,%
+    erfc,%
+    exp,%
+    exp2,%
+    exp_mod_normal,%
+    exp_mod_normal_ccdf_log,%
+    exp_mod_normal_cdf,%
+    exp_mod_normal_cdf_log,%
+    exp_mod_normal_log,%
+    exp_mod_normal_rng,%
+    expm1,%
+    exponential,%
+    exponential_ccdf_log,%
+    exponential_cdf,%
+    exponential_cdf_log,%
+    exponential_log,%
+    exponential_rng,%
+    fabs,%
+    falling_factorial,%
+    fdim,%
+    floor,%
+    fma,%
+    fmax,%
+    fmin,%
+    fmod,%
+    frechet,%
+    frechet_ccdf_log,%
+    frechet_cdf,%
+    frechet_cdf_log,%
+    frechet_log,%
+    frechet_rng,%
+    gamma,%
+    gamma_ccdf_log,%
+    gamma_cdf,%
+    gamma_cdf_log,%
+    gamma_log,%
+    gamma_p,%
+    gamma_q,%
+    gamma_rng,%
+    gaussian_dlm_obs,%
+    gaussian_dlm_obs_log,%
+    get_lp,%
+    gumbel,%
+    gumbel_ccdf_log,%
+    gumbel_cdf,%
+    gumbel_cdf_log,%
+    gumbel_log,%
+    gumbel_rng,%
+    head,%
+    hypergeometric,%
+    hypergeometric_log,%
+    hypergeometric_rng,%
+    hypot,%
+    if_else,%
+    int_step,%
+    inv,%
+    inv_chi_square,%
+    inv_chi_square_ccdf_log,%
+    inv_chi_square_cdf,%
+    inv_chi_square_cdf_log,%
+    inv_chi_square_log,%
+    inv_chi_square_rng,%
+    inv_cloglog,%
+    inv_gamma,%
+    inv_gamma_ccdf_log,%
+    inv_gamma_cdf,%
+    inv_gamma_cdf_log,%
+    inv_gamma_log,%
+    inv_gamma_rng,%
+    inv_logit,%
+    inv_phi,%
+    inv_sqrt,%
+    inv_square,%
+    inv_wishart,%
+    inv_wishart_log,%
+    inv_wishart_rng,%
+    inverse,%
+    inverse_spd,%
+    is_inf,%
+    is_nan,%
+    lbeta,%
+    lgamma,%
+    lkj_corr,%
+    lkj_corr_cholesky,%
+    lkj_corr_cholesky_log,%
+    lkj_corr_cholesky_rng,%
+    lkj_corr_log,%
+    lkj_corr_rng,%
+    lmgamma,%
+    log,%
+    log10,%
+    log1m,%
+    log1m_exp,%
+    log1m_inv_logit,%
+    log1p,%
+    log1p_exp,%
+    log2,%
+    log_determinant,%
+    log_diff_exp,%
+    log_falling_factorial,%
+    log_inv_logit,%
+    log_mix,%
+    log_rising_factorial,%
+    log_softmax,%
+    log_sum_exp,%
+    logistic,%
+    logistic_ccdf_log,%
+    logistic_cdf,%
+    logistic_cdf_log,%
+    logistic_log,%
+    logistic_rng,%
+    logit,%
+    lognormal,%
+    lognormal_ccdf_log,%
+    lognormal_cdf,%
+    lognormal_cdf_log,%
+    lognormal_log,%
+    lognormal_rng,%
+    machine_precision,%
+    max,%
+    mdivide_left_tri_low,%
+    mdivide_right_tri_low,%
+    mean,%
+    min,%
+    modified_bessel_first_kind,%
+    modified_bessel_second_kind,%
+    multi_gp,%
+    multi_gp_cholesky,%
+    multi_gp_cholesky_log,%
+    multi_gp_log,%
+    multi_normal,%
+    multi_normal_cholesky,%
+    multi_normal_cholesky_log,%
+    multi_normal_cholesky_rng,%
+    multi_normal_log,%
+    multi_normal_prec,%
+    multi_normal_prec_log,%
+    multi_normal_rng,%
+    multi_student_t,%
+    multi_student_t_log,%
+    multi_student_t_rng,%
+    multinomial,%
+    multinomial_log,%
+    multinomial_rng,%
+    multiply_log,%
+    multiply_lower_tri_self_transpose,%
+    neg_binomial,%
+    neg_binomial_2,%
+    neg_binomial_2_ccdf_log,%
+    neg_binomial_2_cdf,%
+    neg_binomial_2_cdf_log,%
+    neg_binomial_2_log,%
+    neg_binomial_2_log,%
+    neg_binomial_2_log_log,%
+    neg_binomial_2_log_rng,%
+    neg_binomial_2_rng,%
+    neg_binomial_ccdf_log,%
+    neg_binomial_cdf,%
+    neg_binomial_cdf_log,%
+    neg_binomial_log,%
+    neg_binomial_rng,%
+    negative_infinity,%
+    normal,%
+    normal_ccdf_log,%
+    normal_cdf,%
+    normal_cdf_log,%
+    normal_log,%
+    normal_rng,%
+    not_a_number,%
+    num_elements,%
+    ordered_logistic,%
+    ordered_logistic_log,%
+    ordered_logistic_rng,%
+    owens_t,%
+    pareto,%
+    pareto_ccdf_log,%
+    pareto_cdf,%
+    pareto_cdf_log,%
+    pareto_log,%
+    pareto_rng,%
+    pareto_type_2,%
+    pareto_type_2_ccdf_log,%
+    pareto_type_2_cdf,%
+    pareto_type_2_cdf_log,%
+    pareto_type_2_log,%
+    pareto_type_2_rng,%
+    pi,%
+    poisson,%
+    poisson_ccdf_log,%
+    poisson_cdf,%
+    poisson_cdf_log,%
+    poisson_log,%
+    poisson_log,%
+    poisson_log_log,%
+    poisson_log_rng,%
+    poisson_rng,%
+    positive_infinity,%
+    pow,%
+    prod,%
+    qr_Q,%
+    qr_R,%
+    quad_form,%
+    quad_form_diag,%
+    quad_form_sym,%
+    rank,%
+    rayleigh,%
+    rayleigh_ccdf_log,%
+    rayleigh_cdf,%
+    rayleigh_cdf_log,%
+    rayleigh_log,%
+    rayleigh_rng,%
+    rep_array,%
+    rep_matrix,%
+    rep_row_vector,%
+    rep_vector,%
+    rising_factorial,%
+    round,%
+    row,%
+    rows,%
+    rows_dot_product,%
+    rows_dot_self,%
+    scaled_inv_chi_square,%
+    scaled_inv_chi_square_ccdf_log,%
+    scaled_inv_chi_square_cdf,%
+    scaled_inv_chi_square_cdf_log,%
+    scaled_inv_chi_square_log,%
+    scaled_inv_chi_square_rng,%
+    sd,%
+    segment,%
+    sin,%
+    singular_values,%
+    sinh,%
+    size,%
+    skew_normal,%
+    skew_normal_ccdf_log,%
+    skew_normal_cdf,%
+    skew_normal_cdf_log,%
+    skew_normal_log,%
+    skew_normal_rng,%
+    softmax,%
+    sort_asc,%
+    sort_desc,%
+    sort_indices_asc,%
+    sort_indices_desc,%
+    sqrt,%
+    sqrt2,%
+    square,%
+    squared_distance,%
+    step,%
+    student_t,%
+    student_t_ccdf_log,%
+    student_t_cdf,%
+    student_t_cdf_log,%
+    student_t_log,%
+    student_t_rng,%
+    sub_col,%
+    sub_row,%
+    sum,%
+    tail,%
+    tan,%
+    tanh,%
+    tcrossprod,%
+    tgamma,%
+    to_array_1d,%
+    to_array_2d,%
+    to_matrix,%
+    to_row_vector,%
+    to_vector,%
+    trace,%
+    trace_gen_quad_form,%
+    trace_quad_form,%
+    trigamma,%
+    trunc,%
+    uniform,%
+    uniform_ccdf_log,%
+    uniform_cdf,%
+    uniform_cdf_log,%
+    uniform_log,%
+    uniform_rng,%
+    variance,%
+    von_mises,%
+    von_mises_log,%
+    von_mises_rng,%
+    weibull,%
+    weibull_ccdf_log,%
+    weibull_cdf,%
+    weibull_cdf_log,%
+    weibull_log,%
+    weibull_rng,%
+    wiener,%
+    wiener_log,%
+    wishart,%
+    wishart_log,%
+    wishart_rng
   },%
   otherkeywords={<-,~},%
   sensitive=true,%
@@ -254,7 +454,6 @@
   literate={<-}{{$\leftarrow$}}1 {~}{{$\sim$}}1%
 }
 
-
 \endinput
 %%
 %% End of file `lstbayes.sty'.