diff options
author | Norbert Preining <norbert@preining.info> | 2019-09-02 13:46:59 +0900 |
---|---|---|
committer | Norbert Preining <norbert@preining.info> | 2019-09-02 13:46:59 +0900 |
commit | e0c6872cf40896c7be36b11dcc744620f10adf1d (patch) | |
tree | 60335e10d2f4354b0674ec22d7b53f0f8abee672 /macros/latex/contrib/lstbayes |
Initial commit
Diffstat (limited to 'macros/latex/contrib/lstbayes')
-rw-r--r-- | macros/latex/contrib/lstbayes/Makefile | 42 | ||||
-rw-r--r-- | macros/latex/contrib/lstbayes/README.md | 54 | ||||
-rw-r--r-- | macros/latex/contrib/lstbayes/examples.pdf | bin | 0 -> 140037 bytes | |||
-rw-r--r-- | macros/latex/contrib/lstbayes/examples.tex | 128 | ||||
-rw-r--r-- | macros/latex/contrib/lstbayes/lstbayes.dtx | 609 | ||||
-rw-r--r-- | macros/latex/contrib/lstbayes/lstbayes.ins | 40 | ||||
-rw-r--r-- | macros/latex/contrib/lstbayes/lstbayes.pdf | bin | 0 -> 135554 bytes |
7 files changed, 873 insertions, 0 deletions
diff --git a/macros/latex/contrib/lstbayes/Makefile b/macros/latex/contrib/lstbayes/Makefile new file mode 100644 index 0000000000..19e0345532 --- /dev/null +++ b/macros/latex/contrib/lstbayes/Makefile @@ -0,0 +1,42 @@ +# +# This file generates files required to use the lstbayes package +# + +# formatting tools +PYTHON = python3 +SHELL = bash +LATEX = pdflatex +TEX = tex + +.PHONY: build pdf all + +all: build pdf + +build: lstbayes.sty + +release: build pdf README.md + -rm lstbayes.zip + if [ -d lstbayes ]; then rm -rf ./lstbayes; fi + mkdir lstbayes + cp lstbayes.pdf lstbayes.ins lstbayes.dtx examples.tex examples.pdf README.md Makefile lstbayes + zip -r lstbayes.zip lstbayes + +pdf: lstbayes.pdf examples.pdf + +lstbayes.dtx: lstbayes_template.dtx lstbayes.py + $(PYTHON) lstbayes.py $(pkgversion) + +lstbayes.sty: lstbayes.ins lstbayes.dtx + $(TEX) $< + +lstbayes.pdf: lstbayes.dtx + $(LATEX) $< + makeindex -s gind.ist -o ${@:.pdf=.ind} ${@:.pdf=.idx} + makeindex -s gglo.ist -o ${@:.pdf=.gls} ${@:.pdf=.glo} + $(LATEX) $< + $(LATEX) $< + +examples.pdf: examples.tex + $(LATEX) $< + $(LATEX) $< + diff --git a/macros/latex/contrib/lstbayes/README.md b/macros/latex/contrib/lstbayes/README.md new file mode 100644 index 0000000000..5ea1e5d0ac --- /dev/null +++ b/macros/latex/contrib/lstbayes/README.md @@ -0,0 +1,54 @@ +# Listings language drivers for BUGS, JAGS, and Stan + +[![CTAN](https://img.shields.io/ctan/v/lstbayes.svg)](https://www.ctan.org/pkg/lstbayes) +[![CTAN license](https://img.shields.io/ctan/l/lstbayes.svg)](https://www.ctan.org/pkg/lstbayes) + +Adds support for the following languages to the LaTeX +[listings](http://www.ctan.org/pkg/listings/) +package, which pretty-prints source code: + +- [BUGS](http://www.openbugs.net) +- [JAGS](http://mcmc-jags.sourceforge.net/) +- [Stan](http://mc-stan.org/) + +# Usage + +To use, load the package +```latex +\usepackage{lstbayes} +``` +Then use `BUGS`, `JAGS` or `Stan` as a language in one of the listings environments or commands. For example, to format the Stan [Eight schools](https://raw.githubusercontent.com/wiki/stan-dev/rstan/8schools.stan) model, +```latex +\begin{lstlisting}[language=Stan] +data { + int<lower=0> J; // number of schools + real y[J]; // estimated treatment effects + real<lower=0> sigma[J]; // s.e. of effect estimates +} +parameters { + real mu; + real<lower=0> tau; + real eta[J]; +} +transformed parameters { + real theta[J]; + for (j in 1:J) + theta[j] <- mu + tau * eta[j]; +} +model { + eta ~ normal(0, 1); + y ~ normal(theta, sigma); +} +\end{lstlisting} +``` + +Also see the examples in `examples.tex` and `examples.pdf` files included in this repository. +See the `listings` [documentation](https://www.ctan.org/pkg/listings/) for more on how to use the `listings` package. + +# Issues + +Development occurs on github at <https://github.com/jrnold/lstbayes>. + + +<!-- LocalWords: lstbayes tex usepackage lstlisting pdf + --> diff --git a/macros/latex/contrib/lstbayes/examples.pdf b/macros/latex/contrib/lstbayes/examples.pdf Binary files differnew file mode 100644 index 0000000000..06daa4ace9 --- /dev/null +++ b/macros/latex/contrib/lstbayes/examples.pdf diff --git a/macros/latex/contrib/lstbayes/examples.tex b/macros/latex/contrib/lstbayes/examples.tex new file mode 100644 index 0000000000..9ff02ab83d --- /dev/null +++ b/macros/latex/contrib/lstbayes/examples.tex @@ -0,0 +1,128 @@ +\documentclass{article} + +\title{Examples for the \textsf{lstbayes} package} +\author{Jeffrey B. Arnold} + +\usepackage{lstbayes} +\usepackage{hyperref} + +\begin{document} + +\maketitle{} + +Some example programs typset using the \textsf{listings} language drivers provideb by the \textsf{lstbayes} package. + +\section{BUGS} + +The Rats model from the OpenBUGS Examples Volume I: \url{http://www.openbugs.net/Examples/Rats.html}. +\begin{lstlisting}[language=BUGS] +model { + for( i in 1 : N ) { + for( j in 1 : T ) { + Y[i , j] ~ dnorm(mu[i , j],tau.c) + mu[i , j] <- alpha[i] + beta[i] * (x[j] - xbar) + culmative.Y[i , j] <- culmative(Y[i , j], Y[i , j]) + post.pv.Y[i , j] <- post.p.value(Y[i , j]) + prior.pv.Y[i , j] <- prior.p.value(Y[i , j]) + replicate.post.Y[i , j] <- replicate.post(Y[i , j]) + pv.post.Y[i , j] <- step(Y[i , j] - replicate.post.Y[i , j]) + replicate.prior.Y[i , j] <- replicate.prior(Y[i , j]) + pv.prior.Y[i , j] <- step(Y[i , j] - replicate.prior.Y[i , j]) + } + alpha[i] ~ dnorm(alpha.c,alpha.tau) + beta[i] ~ dnorm(beta.c,beta.tau) + } + tau.c ~ dgamma(0.001,0.001) + sigma <- 1 / sqrt(tau.c) + alpha.c ~ dnorm(0.0,1.0E-6) + alpha.tau ~ dgamma(0.001,0.001) + beta.c ~ dnorm(0.0,1.0E-6) + beta.tau ~ dgamma(0.001,0.001) + alpha0 <- alpha.c - xbar * beta.c +} +\end{lstlisting} + + +\section{JAGS} + +Linear regression example from John Myles White, \url{http://www.johnmyleswhite.com/notebook/2010/08/20/using-jags-in-r-with-the-rjags-package/}. + +\begin{lstlisting}[language=JAGS] +model { + for (i in 1:N){ + y[i] ~ dnorm(y.hat[i], tau) + y.hat[i] <- a + b * x[i] + } + a ~ dnorm(0, .0001) + b ~ dnorm(0, .0001) + tau <- pow(sigma, -2) + sigma ~ dunif(0, 100) +} +\end{lstlisting} + + +\section{Stan} + +Rats example from \url{https://github.com/stan-dev/example-models/blob/master/bugs_examples/vol1/rats/rats_vec.stan}. + +\begin{lstlisting}[language=Stan] +// http://www.mrc-bsu.cam.ac.uk/bugs/winbugs/Vol1.pdf +// Page 3: Rats +data { + int<lower=0> N; + int<lower=0> T; + real x[T]; + real y[N,T]; + real xbar; +} +transformed data { + real x_minus_xbar[T]; + real y_linear[N*T]; + + for (t in 1:T) + x_minus_xbar[t] <- x[t] - xbar; + + for (n in 1:N) + for (t in 1:T) + y_linear[(n-1)*T + t] <- y[n, t]; +} +parameters { + real alpha[N]; + real beta[N]; + + real mu_alpha; + real mu_beta; + + real<lower=0> sigmasq_y; + real<lower=0> sigmasq_alpha; + real<lower=0> sigmasq_beta; +} +transformed parameters { + real<lower=0> sigma_y; + real<lower=0> sigma_alpha; + real<lower=0> sigma_beta; + + sigma_y <- sqrt(sigmasq_y); + sigma_alpha <- sqrt(sigmasq_alpha); + sigma_beta <- sqrt(sigmasq_beta); +} +model { + real pred[N*T]; + + for (n in 1:N) + for (t in 1:T) + pred[(n-1)*T + t] <- fma(beta[n], x_minus_xbar[t], alpha[n]); + + mu_alpha ~ normal(0, 100); + mu_beta ~ normal(0, 100); + sigmasq_y ~ inv_gamma(0.001, 0.001); + sigmasq_alpha ~ inv_gamma(0.001, 0.001); + sigmasq_beta ~ inv_gamma(0.001, 0.001); + alpha ~ normal(mu_alpha, sigma_alpha); // vectorized + beta ~ normal(mu_beta, sigma_beta); // vectorized + + y_linear ~ normal(pred, sigma_y); // vectorized +} +\end{lstlisting} + +\end{document} diff --git a/macros/latex/contrib/lstbayes/lstbayes.dtx b/macros/latex/contrib/lstbayes/lstbayes.dtx new file mode 100644 index 0000000000..00a8634a93 --- /dev/null +++ b/macros/latex/contrib/lstbayes/lstbayes.dtx @@ -0,0 +1,609 @@ +%%%%%%%%% \iffalse meta-comment +% +% Copyright (C) 2018 by Jeffrey B. Arnold <jeffrey.arnold@gmail.com> +% --------------------------------------------------------------------------- +% This work may be distributed and/or modified under the +% conditions of the LaTeX Project Public License, either version 1.3 +% of this license or (at your option) any later version. +% The latest version of this license is in +% http://www.latex-project.org/lppl.txt +% and version 1.3 or later is part of all distributions of LaTeX +% version 2005/12/01 or later. +% +% This work has the LPPL maintenance status `maintained'. +% +% The Current Maintainer of this work is Jeffrey B. Arnold. +% +% This work consists of the files lstbayes.dtx and lstbayes.ins +% and the derived filebase lstbayes.sty. +% +% \fi +% +% \iffalse +%<*driver> +\ProvidesFile{lstbayes.dtx} +%</driver> +%<package>\NeedsTeXFormat{LaTeX2e}[1999/12/01] +%<package>\ProvidesPackage{lstbayes} +%<*package> + [2018/07/06 lstbayes listings language drivers for BUGS, JAGS, and Stan] +%</package> +% +%<*driver> +\documentclass{ltxdoc} +\usepackage{lstbayes} +\usepackage{hyperref} +\EnableCrossrefs +\CodelineIndex +\RecordChanges +\begin{document} + \DocInput{lstbayes.dtx} + \PrintChanges + \PrintIndex +\end{document} +%</driver> +% \fi +% +% \CheckSum{12} +% +% \CharacterTable +% {Upper-case \A\B\C\D\E\F\G\H\I\J\K\L\M\N\O\P\Q\R\S\T\U\V\W\X\Y\Z +% Lower-case \a\b\c\d\e\f\g\h\i\j\k\l\m\n\o\p\q\r\s\t\u\v\w\x\y\z +% Digits \0\1\2\3\4\5\6\7\8\9 +% Exclamation \! Double quote \" Hash (number) \# +% Dollar \$ Percent \% Ampersand \& +% Acute accent \' Left paren \( Right paren \) +% Asterisk \* Plus \+ Comma \, +% Minus \- Point \. Solidus \/ +% Colon \: Semicolon \; Less than \< +% Equals \= Greater than \> Question mark \? +% Commercial at \@ Left bracket \[ Backslash \\ +% Right bracket \] Circumflex \^ Underscore \_ +% Grave accent \` Left brace \{ Vertical bar \| +% Right brace \} Tilde \~} +% +% +% \changes{2015-09-26}{2015/09/26}{Converted to DTX file} +% \changes{2015-09-27}{2015/09/27}{Fix README} +% \changes{2015-09-28}{2015/09/27}{Fix README. Add keywords for all built-in functions that are in Stan v2.8.0.} +% +% \DoNotIndex{\newcommand,\newenvironment} +% +% \providecommand*{\url}{\texttt} +% \GetFileInfo{lstbayes.dtx} +% \title{The \textsf{lstbayes} package} +% \author{Jeffrey B. Arnold \\ \url{jeffrey.arnold@gmail.com}} +% \date{\fileversion~from \filedate} +% +% \maketitle +% +% \section{Introduction} +% +% This package provides language drivers for the \href{https://www.ctan.org/tex-archive/macros/latex/contrib/listings/}{\textsf{listings}} package for the several Bayesian modeling languages: BUGS, JAGS, and Stan. +% +% \section{Usage} +% +% % See the documentation of the \textsf{listings} package. +% + +% +% \StopEventually{} +% +% \section{Implementation} +% +% \iffalse +%<*package> +% \fi +% +% \begin{macrocode} +\RequirePackage{listings} +% \end{macrocode} +% +% \subsection{BUGS} +% +% Language driver for BUGS, including \href{http://www.openbugs.net/w/FrontPage}{WinBUGS} and \href{http://openbugs.net}{OpenBUGS}. +% The driver is based on \href{http://www.openbugs.net/Manuals/Manual.html}{OpenBUGS v. 3.2.3}. +% +% \begin{macrocode} +\lstdefinelanguage{BUGS}{ + morekeywords=[1]{for,in,model,T,I,C},% + morecomment=[l]{\#},% + sensitive=true,% + alsoletter={.},% + otherkeywords={<-,~},% + literate={<-}{{$\leftarrow$}}1 {~}{{$\sim$}}1% +} +\lstalias[]{OpenBUGS}[]{BUGS} +\lstalias[]{WinBUGS}[]{BUGS} +% \end{macrocode} +% +% \subsection{JAGS} +% +% Language driver for \href{http://mcmc-jags.sourceforge.net/}{JAGS}. +% The driver is based on JAGS version 3.4.0 (Sept 4, 2013). +% +% +% \begin{macrocode} +\lstdefinelanguage[]{JAGS}[]{BUGS}{ + morekeywords=[1]{data,var,const},% + morecomment=[n]{/*}{*/}% +} +% \end{macrocode} +% +% \subsection{Stan} +% +% Language driver for \href{http://mc-stan.org/}{Stan}. +% The driver is based on Stan modeling language version \href{https://github.com/stan-dev/stan/releases/download/v2.17.0/stan-reference-2.17.0.pdf}{2.17.0}. +% +% \begin{macrocode} +\lstdefinelanguage{Stan}{ + morekeywords=[1]{% + functions,% + data,% + else,% + for,% + generated,% + if,% + in,% + increment_log_prob,% + integrate_ode_bdf,% + integrate_ode_rk45,% + integrate_ode,% + lower,% + model,% + parameters,% + print,% + quantities,% + reject,% + return,% + T,% + target,% + transformed,% + upper,% + while% + },% + morekeywords=[2]{% + cholesky_factor_corr,% + cholesky_factor_cov,% + corr_matrix,% + cov_matrix,% + int,% + matrix,% + ordered,% + positive_ordered,% + real,% + row_vector,% + simplex,% + unit_vector,% + vector,% + void% + },% + morekeywords=[3]{% + Phi,% + Phi_approx,% + abs,% + acos,% + acosh,% + algebra_solver,% + append_array,% + append_col,% + append_row,% + asin,% + asinh,% + atan,% + atan2,% + atanh,% + bernoulli,% + bernoulli_cdf,% + bernoulli_lccdf,% + bernoulli_lcdf,% + bernoulli_logit,% + bernoulli_logit_lpmf,% + bernoulli_logit_rng,% + bernoulli_lpmf,% + bernoulli_rng,% + bessel_first_kind,% + bessel_second_kind,% + beta,% + beta_binomial,% + beta_binomial_cdf,% + beta_binomial_lccdf,% + beta_binomial_lcdf,% + beta_binomial_lpmf,% + beta_binomial_rng,% + beta_cdf,% + beta_lccdf,% + beta_lcdf,% + beta_lpdf,% + beta_rng,% + binary_log_loss,% + binomial,% + binomial_cdf,% + binomial_coefficient_log,% + binomial_lccdf,% + binomial_lcdf,% + binomial_logit,% + binomial_logit_lpmf,% + binomial_lpmf,% + binomial_rng,% + block,% + categorical,% + categorical_logit,% + categorical_logit_lpmf,% + categorical_logit_rng,% + categorical_lpmf,% + categorical_rng,% + cauchy,% + cauchy_cdf,% + cauchy_lccdf,% + cauchy_lcdf,% + cauchy_lpdf,% + cauchy_rng,% + cbrt,% + ceil,% + chi_square,% + chi_square_cdf,% + chi_square_lccdf,% + chi_square_lcdf,% + chi_square_lpdf,% + chi_square_rng,% + cholesky_decompose,% + choose,% + col,% + cols,% + columns_dot_product,% + columns_dot_self,% + cos,% + cosh,% + cov_exp_quad,% + crossprod,% + csr_extract_u,% + csr_extract_v,% + csr_extract_w,% + csr_matrix_times_vector,% + csr_to_dense_matrix,% + cumulative_sum,% + determinant,% + diag_matrix,% + diag_post_multiply,% + diag_pre_multiply,% + diagonal,% + digamma,% + dims,% + dirichlet,% + dirichlet_lpdf,% + dirichlet_rng,% + distance,% + dot_product,% + dot_self,% + double_exponential,% + double_exponential_cdf,% + double_exponential_lccdf,% + double_exponential_lcdf,% + double_exponential_lpdf,% + double_exponential_rng,% + e,% + eigenvalues_sym,% + eigenvectors_sym,% + erf,% + erfc,% + exp,% + exp2,% + exp_mod_normal,% + exp_mod_normal_cdf,% + exp_mod_normal_lccdf,% + exp_mod_normal_lcdf,% + exp_mod_normal_lpdf,% + exp_mod_normal_rng,% + expm1,% + exponential,% + exponential_cdf,% + exponential_lccdf,% + exponential_lcdf,% + exponential_lpdf,% + exponential_rng,% + fabs,% + falling_factorial,% + fdim,% + floor,% + fma,% + fmax,% + fmin,% + fmod,% + frechet,% + frechet_cdf,% + frechet_lccdf,% + frechet_lcdf,% + frechet_lpdf,% + frechet_rng,% + gamma,% + gamma_cdf,% + gamma_lccdf,% + gamma_lcdf,% + gamma_lpdf,% + gamma_p,% + gamma_q,% + gamma_rng,% + gaussian_dlm_obs,% + gaussian_dlm_obs_lpdf,% + get_lp,% + gumbel,% + gumbel_cdf,% + gumbel_lccdf,% + gumbel_lcdf,% + gumbel_lpdf,% + gumbel_rng,% + head,% + hypergeometric,% + hypergeometric_lpmf,% + hypergeometric_rng,% + hypot,% + inc_beta,% + int_step,% + integrate_ode,% + integrate_ode_bdf,% + integrate_ode_rk45,% + inv,% + inv_Phi,% + inv_chi_square,% + inv_chi_square_cdf,% + inv_chi_square_lccdf,% + inv_chi_square_lcdf,% + inv_chi_square_lpdf,% + inv_chi_square_rng,% + inv_cloglog,% + inv_gamma,% + inv_gamma_cdf,% + inv_gamma_lccdf,% + inv_gamma_lcdf,% + inv_gamma_lpdf,% + inv_gamma_rng,% + inv_logit,% + inv_sqrt,% + inv_square,% + inv_wishart,% + inv_wishart_lpdf,% + inv_wishart_rng,% + inverse,% + inverse_spd,% + is_inf,% + is_nan,% + lbeta,% + lchoose,% + lgamma,% + lkj_corr,% + lkj_corr_cholesky,% + lkj_corr_cholesky_lpdf,% + lkj_corr_cholesky_rng,% + lkj_corr_lpdf,% + lkj_corr_rng,% + lmgamma,% + lmultiply,% + log,% + log10,% + log1m,% + log1m_exp,% + log1m_inv_logit,% + log1p,% + log1p_exp,% + log2,% + log_determinant,% + log_diff_exp,% + log_falling_factorial,% + log_inv_logit,% + log_mix,% + log_rising_factorial,% + log_softmax,% + log_sum_exp,% + logistic,% + logistic_cdf,% + logistic_lccdf,% + logistic_lcdf,% + logistic_lpdf,% + logistic_rng,% + logit,% + lognormal,% + lognormal_cdf,% + lognormal_lccdf,% + lognormal_lcdf,% + lognormal_lpdf,% + lognormal_rng,% + machine_precision,% + matrix_exp,% + max,% + mdivide_left_spd,% + mdivide_left_tri_low,% + mdivide_right_spd,% + mdivide_right_tri_low,% + mean,% + min,% + modified_bessel_first_kind,% + modified_bessel_second_kind,% + multi_gp,% + multi_gp_cholesky,% + multi_gp_cholesky_lpdf,% + multi_gp_lpdf,% + multi_normal,% + multi_normal_cholesky,% + multi_normal_cholesky_lpdf,% + multi_normal_cholesky_rng,% + multi_normal_lpdf,% + multi_normal_prec,% + multi_normal_prec_lpdf,% + multi_normal_rng,% + multi_student_t,% + multi_student_t_lpdf,% + multi_student_t_rng,% + multinomial,% + multinomial_lpmf,% + multinomial_rng,% + multiply_log,% + multiply_lower_tri_self_transpose,% + neg_binomial,% + neg_binomial_2,% + neg_binomial_2_cdf,% + neg_binomial_2_lccdf,% + neg_binomial_2_lcdf,% + neg_binomial_2_log,% + neg_binomial_2_log_lpmf,% + neg_binomial_2_log_rng,% + neg_binomial_2_lpmf,% + neg_binomial_2_rng,% + neg_binomial_cdf,% + neg_binomial_lccdf,% + neg_binomial_lcdf,% + neg_binomial_lpmf,% + neg_binomial_rng,% + negative_infinity,% + normal,% + normal_cdf,% + normal_lccdf,% + normal_lcdf,% + normal_lpdf,% + normal_rng,% + not_a_number,% + num_elements,% + ordered_logistic,% + ordered_logistic_lpmf,% + ordered_logistic_rng,% + owens_t,% + pareto,% + pareto_cdf,% + pareto_lccdf,% + pareto_lcdf,% + pareto_lpdf,% + pareto_rng,% + pareto_type_2,% + pareto_type_2_cdf,% + pareto_type_2_lccdf,% + pareto_type_2_lcdf,% + pareto_type_2_lpdf,% + pareto_type_2_rng,% + pi,% + poisson,% + poisson_cdf,% + poisson_lccdf,% + poisson_lcdf,% + poisson_log,% + poisson_log_lpmf,% + poisson_log_rng,% + poisson_lpmf,% + poisson_rng,% + positive_infinity,% + pow,% + print,% + prod,% + qr_Q,% + qr_R,% + quad_form,% + quad_form_diag,% + quad_form_sym,% + rank,% + rayleigh,% + rayleigh_cdf,% + rayleigh_lccdf,% + rayleigh_lcdf,% + rayleigh_lpdf,% + rayleigh_rng,% + reject,% + rep_array,% + rep_matrix,% + rep_row_vector,% + rep_vector,% + rising_factorial,% + round,% + row,% + rows,% + rows_dot_product,% + rows_dot_self,% + scaled_inv_chi_square,% + scaled_inv_chi_square_cdf,% + scaled_inv_chi_square_lccdf,% + scaled_inv_chi_square_lcdf,% + scaled_inv_chi_square_lpdf,% + scaled_inv_chi_square_rng,% + sd,% + segment,% + sin,% + singular_values,% + sinh,% + size,% + skew_normal,% + skew_normal_cdf,% + skew_normal_lccdf,% + skew_normal_lcdf,% + skew_normal_lpdf,% + skew_normal_rng,% + softmax,% + sort_asc,% + sort_desc,% + sort_indices_asc,% + sort_indices_desc,% + sqrt,% + sqrt2,% + square,% + squared_distance,% + step,% + student_t,% + student_t_cdf,% + student_t_lccdf,% + student_t_lcdf,% + student_t_lpdf,% + student_t_rng,% + sub_col,% + sub_row,% + sum,% + tail,% + tan,% + tanh,% + target,% + tcrossprod,% + tgamma,% + to_array_1d,% + to_array_2d,% + to_matrix,% + to_row_vector,% + to_vector,% + trace,% + trace_gen_quad_form,% + trace_quad_form,% + trigamma,% + trunc,% + uniform,% + uniform_cdf,% + uniform_lccdf,% + uniform_lcdf,% + uniform_lpdf,% + uniform_rng,% + variance,% + von_mises,% + von_mises_lpdf,% + von_mises_rng,% + weibull,% + weibull_cdf,% + weibull_lccdf,% + weibull_lcdf,% + weibull_lpdf,% + weibull_rng,% + wiener,% + wiener_lpdf,% + wishart,% + wishart_lpdf,% + wishart_rng + },% + otherkeywords={.*=,./=,+=,-=,*=,/=,<-,~},% + sensitive=true,% + morecomment=[l]{\#},% + morecomment=[l]{//},% + morecomment=[n]{/*}{*/},% + string=[d]"%, + literate={<-}{{$\leftarrow$}}1 {~}{{$\sim$}}1% +} +% \end{macrocode} + +% +% \iffalse +%</package> +% \fi +% +% \Finale
\ No newline at end of file diff --git a/macros/latex/contrib/lstbayes/lstbayes.ins b/macros/latex/contrib/lstbayes/lstbayes.ins new file mode 100644 index 0000000000..30c906f57e --- /dev/null +++ b/macros/latex/contrib/lstbayes/lstbayes.ins @@ -0,0 +1,40 @@ +%% +%% Copyright (C) 2015 by Jeffrey B. Arnold <jeffrey.arnold@gmail.com> +%% +%% This file may be distributed and/or modified under the +%% conditions of the LaTeX Project Public License, either +%% version 1.3 of this license or (at your option) any later +%% version. The latest version of this license is in: +%% +%% http://www.latex-project.org/lppl.txt +%% +%% and version 1.3 or later is part of all distributions of +%% LaTeX version 2005/12/01 or later. +%% +\input docstrip.tex +\keepsilent +\askforoverwritefalse + +\usedir{tex/latex/lstbayes} + +\preamble + +This is a generated file. + +Copyright (C) 2015 by Jeffrey B. Arnold <jeffrey.arnold@gmail.com> + +This file may be distributed and/or modified under the conditions of +the LaTeX Project Public License, either version 1.3c of this license +or (at your option) any later version. The latest version of this +license is in: + + http://www.latex-project.org/lppl.txt + +and version 1.3c or later is part of all distributions of LaTeX +version 2006/05/20 or later. + +\endpreamble + +\generate{\file{lstbayes.sty}{\from{lstbayes.dtx}{package}}} + +\endbatchfile diff --git a/macros/latex/contrib/lstbayes/lstbayes.pdf b/macros/latex/contrib/lstbayes/lstbayes.pdf Binary files differnew file mode 100644 index 0000000000..97d89eb596 --- /dev/null +++ b/macros/latex/contrib/lstbayes/lstbayes.pdf |