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authorNorbert Preining <norbert@preining.info>2023-10-14 03:01:20 +0000
committerNorbert Preining <norbert@preining.info>2023-10-14 03:01:20 +0000
commit315010c30c0dab68a71ca741364438a7a0b1261f (patch)
tree1892d65e76bc025eede34669c33667d1e8c1f218 /macros/context/contrib/context-chromato
parent7c1335b7f300ea31a40bf83026d6b7d24d7bafc5 (diff)
CTAN sync 202310140301
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-rw-r--r--macros/context/contrib/context-chromato/doc/context/third/chromato/chromato-doc.pdfbin81559 -> 0 bytes
-rw-r--r--macros/context/contrib/context-chromato/tex/context/third/chromato/t-chromato.tex130
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-2008.04.05
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diff --git a/macros/context/contrib/context-chromato/tex/context/third/chromato/t-chromato.tex b/macros/context/contrib/context-chromato/tex/context/third/chromato/t-chromato.tex
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-%D \module
-%D [ file=t-chromato,
-%D version=2008.04.05,
-%D title=\CONTEXT\ User Module,
-%D subtitle=Macros for chromatograms,
-%D author=Peter Münster,
-%D date=\currentdate,
-%D copyright={Peter Münster}]
-%C This module is copyrighted by Peter Münster.
-%C Please send any comments to pmrb at free.fr.
-
-% This program is free software; you can redistribute it and/or
-% modify it under the terms of the GNU General Public License
-% as published by the Free Software Foundation; either version 2
-% of the License, or (at your option) any later version.
-
-% This program is distributed in the hope that it will be useful,
-% but without any warranty; without even the implied warranty of
-% merchantability or fitness for a particular purpose. See the
-% GNU General Public License for more details.
-
-\startmodule[chromato]
-
-\writestatus{loading}{Macros for chromatograms}
-
-\unprotect
-
-%D Some internal dimensions:
-\doifundefined{Width}{\newdimen\Width}
-\doifundefined{Height}{\newdimen\Height}
-
-%D \macros{startChromato}
-%D Starting a chromatogram.
-\def\startChromato{\bgroup\dosingleempty\dostartChromato}
-\def\dostartChromato[#1]#2#3{\getparameters[CHROM][dim=0.6,#1]
- \def\myChromFig{\doifdefinedelse{CHROMSdim}{%
- \externalfigure[#2][height=\CHROMSdim\textheight]}{%
- \externalfigure[#2][width=\CHROMdim\makeupwidth]}}%
- \setbox\scratchbox\hbox{\myChromFig}%
- \Width=\wd\scratchbox \Height=\ht\scratchbox \setuppositioning[unit=pt]
- \gdef\SavedCaption{#3}\doifundefined{CHROMSdim}{\placefigure[][fig:#2]{#3}}%
- \bgroup\startpositioning\position(0,0){\myChromFig}}
-
-%D \macros{stopChromato}
-%D End of chromatogram.
-\def\stopChromato{\stoppositioning\egroup\egroup{\doifdefined{CHROMSdim}{%
- \SavedCaption}}}
-
-%D \macros{startChromatos}
-%D Begin set of chromatograms.
-\def\startChromatos{\dosingleempty\dostartChromatos}
-\def\dostartChromatos[#1]#2#3{\placefigure[][fig:#2]{#3}\bgroup
- \getparameters[CHROMS][dim=0.3,#1]
- \doifdefined{CHROMSdist}{\setupcombinations[distance=\CHROMSdist em]}%
- \startcombination[2*1]}
-
-%D \macros{stopChromatos}
-%D End of chromatograms.
-\def\stopChromatos{\stopcombination\egroup}
-
-%D Internal macro: position left or right:
-\define[3]\LRposition{\edef\YPos{\withoutpt{\the\dimexpr(\withoutpt{%
- \the\dimexpr(#1pt/100)}\Height - 0.1\baselineskip)}}%
- \position(#2,\YPos){\vbox to 2pt{\vss{\hbox to 0pt{#3}\vss}}}}
-
-%D \macros{Lbrace}
-%D Place a brace at the left.
-\define[4]\Lbrace{\LRposition{#1}0{\hss\rotate[rotation=90]{%
- $\overbrace{\hskip#2\Height}^{%
- \displaystyle\text{\rotate[rotation=270]{#4}}}$}\hskip#3em}}
-
-%D \macros{Rbrace}
-%D Place a brace at the right.
-\define[4]\Rbrace{\LRposition{#1}{\withoutpt{\the\Width}}{\hskip#3em
- \rotate[rotation=270]{$\overbrace{\hskip#2\Height}^{%
- \displaystyle\text{\rotate[rotation=90]{#4}}}$}\hss}}
-
-%D \macros{Larrow}
-%D Place a flesh at the left.
-\define[2]\Larrow{\LRposition{#1}0{\hss{\tx#2} $\rightarrow$}}
-
-%D \macros{Rarrow}
-%D Place a flesh at the right.
-\define[2]\Rarrow{\LRposition{#1}{\withoutpt{\the\Width}}{$\leftarrow$ \tx#2}}
-
-%D \macros{Above,Abrace}
-%D Place something above the chromatogram.
-\define[3]\Oposition{\edef\XPos{\withoutpt{\the\dimexpr(\withoutpt{%
- \the\dimexpr(#1pt/100)}\Width)}}%
- \position(\XPos,-\withoutpt{\the\dimexpr(#2\baselineskip)}){%
- \hbox to 0pt{\hss#3\hss}}}
-\define[2]\Above{\Oposition{#1}{0.8}{\tx#2}}
-\define[3]\Abrace{\Oposition{#1}{2.5}{%
- $\overbrace{\hskip#2\Width}^{\displaystyle\text{#3}}$}}
-
-\protect
-
-\stopmodule
-
-\doifnotmode{demo}{\endinput}
-
-%D Usage example:
-\usemodule[chromato]
-\setupexternalfigures[directory=samples]
-\mainlanguage[de]
-\starttext
-\startChromato{ecolizeit}{Expression der rekombinanten Fucosyltransferase~V in
- {\em E.~coli}.}
- \Above{5}{BRS}\Above{15}{1h}\Above{26}{2h}\Above{38}{3h}\Above{50}{4h}
- \Above{61}{1h}\Above{72}{2h}\Above{83}{3h}\Above{94}{4h}
- \Larrow{12}{97\,kDa}\Larrow{20}{66\,kDa}
- \Larrow{32}{45\,kDa}\Larrow{52}{31\,kDa}
- \Lbrace{39}{0.75}{4}{A}
- \Lbrace{90}{0.16}{4}{B}
- \Abrace{32}{0.42}{löslich}
- \Abrace{77}{0.42}{unlöslich}
- \Rarrow{29}{FucT~V}\Rarrow{87}{FucT~V}
-\stopChromato
-\startChromatos[dim=0.17,dist=2]{saeuger}{Expression von rekombinanter
- Fucosyltransferase~V in unterschiedlichen Säugerzellinien.}
- \startChromato{saeuger}{A}
- \Above{26}{CHO}\Above{74}{HEK}
- \Larrow{4}{96\,kDa}\Larrow{37}{66\,kDa}\Larrow{81}{45\,kDa}
- \stopChromato
- \startChromato{saeugerred}{B}
- \Above{26}{CHO}\Above{74}{HEK}
- \Rarrow{81}{FucT~V}
- \stopChromato
-\stopChromatos
-\stoptext