diff options
author | Norbert Preining <norbert@preining.info> | 2019-09-02 13:46:59 +0900 |
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committer | Norbert Preining <norbert@preining.info> | 2019-09-02 13:46:59 +0900 |
commit | e0c6872cf40896c7be36b11dcc744620f10adf1d (patch) | |
tree | 60335e10d2f4354b0674ec22d7b53f0f8abee672 /graphics/mcf2graph/mcf_mplib_exa.tex |
Initial commit
Diffstat (limited to 'graphics/mcf2graph/mcf_mplib_exa.tex')
-rw-r--r-- | graphics/mcf2graph/mcf_mplib_exa.tex | 460 |
1 files changed, 460 insertions, 0 deletions
diff --git a/graphics/mcf2graph/mcf_mplib_exa.tex b/graphics/mcf2graph/mcf_mplib_exa.tex new file mode 100644 index 0000000000..b71e80a2f7 --- /dev/null +++ b/graphics/mcf2graph/mcf_mplib_exa.tex @@ -0,0 +1,460 @@ +%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% +% Example of MCF typest with LuaLaTeX(luamplib) by A.Yamaji 2019.07.07 +%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% +%%% mcf2graph.mf it must be version 4.44 or later +\documentclass{article} +%------------------------------------------------------------------------------ +\usepackage{luamplib}% +\usepackage[T1]{fontenc}% +\usepackage{textcomp}% +\mplibcodeinherit{enable}% +\mplibverbatim{enable}% +\mplibnumbersystem{double}% +\everymplib{% + if unknown Ph1: input mcf2graph.mf; fi + sw_calc:=1; + sw_fframe:=4; + max_blength:=4.5mm; + defaultfont:="uhvr8r"; + defaultsize:=8bp; + defaultscale:=1; +}% +%------------------------------------------------------------------------------ +\pagestyle{empty} +\topmargin=-20mm +\oddsidemargin=0mm +\textwidth=170mm +\textheight=280mm +\unitlength=1mm +%------------------------------------------------------------------------------------ +\begin{document} +\begin{center} + {\Huge\sf MCF example for luamplib(Lua\LaTeX)}\vspace{5mm}\\ + Author : Akira Yamaji \quad Date : \today\\ + Located at : http://www.ctan.org/pkg/mcf2graph\vspace{2mm}\\ +\end{center} +\noindent% +%------------------------------------------------------------------------------------ +{{\tt FM(C) :} molecular formula calculated by mcf2graph\\ +{{\tt MW(C) :} molecular weight calculated by mcf2graph\\ +{{\tt MW(D) :} molecular weight from literature data\vspace{5mm}\\ +\begin{mplibcode} + fsize:=(80mm,40mm); + beginfont("NO:1","EN:Chlorophyll a","MW:893.49") + msize:=(.9,.9); + MCat(0,0.5)(<54, + |=1,?5,{2,5}=dl,4:N,3:\,54~dl,|,?5,{2,4}=dl,5:N, + -2:\,54~dl,|,?5,2=d,5:N,-2:\~dl,54,|,?5,5=d,5:N,-2:\~dl,$5:#, + -1:@,24,/*COO!^15,72,//O,$1:#,=|,||, + {2,9,15,20~zf}:/_,8:/!,14:\,!!, + 4:\`1.45,Mg,17:#,-1:@,11~vb:#,-1:@,23~vb:#, + 21:@,-6~wf,!2,//O,!,O,!2,!!,|,!13,{1,5,9,13}:/_ + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) + endfont +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +|=1,?5,{2,5}=dl,4:N,3:\,54~dl, +|,?5,{2,4}=dl,5:N, +-2:\,54~dl,|,?5,2=d,5:N,-2:\~dl,54, +|,?5,5=d,5:N,-2:\~dl,$5:#, +-1:@,24,/*COO!^15,72,//O,$1:#,=|,||, + {2,9,15,20~zf}:/_,8:/!,14:\,!!, + 4:\`1.45,Mg,17:#,-1:@,11~vb:#, + -1:@,23~vb:#, + 21:@,-6~wf,!2,//O,!,O,!2,!!, +|,!13,{1,5,9,13}:/_ + +\end{verbatim} +\end{minipage} +\vspace{7mm}\\ +%---------------------------------------------------------------------------- +\begin{mplibcode} +fsize:=(80mm,20mm); +beginfont("EN:beta-Carotene","MW:536.888") + msize:=(.65,1); + MCat(.9,.5)( + <30,?6,3=dl,{3,5^35,5^-35}:/_, + 4:\,|,!18,{1,3,5,7,9,11,13,15,17}=dr,{3,7,12,16}:/_, + |,?6,6=dl,{6,2^35,2^-35}:/_ + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) +endfont +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +<30,?6,3=dl,{3,5^35,5^-35}:/_, +4:\,|,!18, +{1,3,5,7,9,11,13,15,17}=dr, +{3,7,12,16}:/_, +|,?6,6=dl,{6,2^35,2^-35}:/_ +\end{verbatim} +\end{minipage} +\vspace{7mm}\\ +%---------------------------------------------------------------------------- +\begin{mplibcode} + fsize:=(80mm,30mm); + beginfont("NO:2","EN:Limonin","MW:470.51") + MCat(0.7,0.5)(<30, + ?6,{-3,-4}=?6,-5=?3,-2=wf,-1=wb,6=?5,-4=?6,-5=wf, + {13,15,17,20}:O,{3,12,21}://O, + {4~wf^60,8~zf^60,18^35,18^-35}:/_,{1^60,5^180,16^60}:/*H, + 14:\*,|,?5,{1,4}=dl,3:O + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) + endfont +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +<30,?6,{-3,-4}=?6,-5=?3, +-2=wf,-1=wb,6=?5,-4=?6,-5=wf, +{13,15,17,20}:O,{3,12,21}://O, +{4~wf^60,8~zf^60,18^35,18^-35}:/_, +{1^60,5^180,16^60}:/*H, +14:\*,|,?5,{1,4}=dl,3:O + +\end{verbatim} +\end{minipage} +\vspace{7mm}\\% +%---------------------------------------------------------------------------- +\begin{mplibcode} +fsize:=(80mm,20mm); +beginfont("NO:4","EN:Gibberellin A3","MW:346.37"); + MCat(0.8,0.5)( + <18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#,13=dl,6=wf,8=wb, + 5:@,40~zf`1,O,60,//O^180,14~zb:#, + 2:/COOH,7://_,13:*/OH,8:/*OH,14:*/_,{1,4}:*/H^60) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) +endfont; +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +<18,?5,3=?7,5=?6[12],8:@,160`1.3,3:#, +13=dl,6=wf,8=wb, +5:@,40~zf`1,O,60,//O^180,14~zb:#, +2:/COOH,7://_,13:*/OH,8:/*OH, +14:*/_,{1,4}:*/H^60) +\end{verbatim} +\end{minipage} +\vspace{7mm}\\ +%---------------------------------------------------------------------------- +\begin{mplibcode} +fsize:=(80mm,25mm); +beginfont("EN:Morphine","MW:285.343") + MCat(0.7,0.5)( + <30,Ph,2=?6,-4=?6,(1,12)=?5[2],-1:O,-1=zb, + 7:@,60~wf`0.75,70~si_`1.3,45,N,/_,9~wb:#, + 15=d,6:/OH,8^180:*/H,12:/*OH + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) +endfont +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +<30,Ph,2=?6,-4=?6,(1,12)=?5[2], +-1:O,-1=zb, +7:@,60~wf`0.75,70~si_`1.3, +45,N,/_,9~wb:#, +15=dl, +6:/OH,8^180:*/H,12:/*OH +\end{verbatim} +\end{minipage} +\vspace{7mm}\\ +%---------------------------------------------------------------------------- +\begin{mplibcode} +fsize:=(80mm,35mm); +beginfont("NO:5","EN:Erythromycin","MW:733.93"); + MCat(0.8,0.5)( + <30,|=1,<-120,60,60,60,-60,60,60,-60,60,60,60,-60,60,60,=|,1:#, + 14:O,13:/*Et,{1,9}://O,{2,10}:*/_,{4,6^-35,8,12^35}:/*_, + {6^35,11,12^-35}:*/OH, + $3:\*,O,30,|,?6`.7,2:O,{3,5^35}:/_,4:/OH,5^-35:/O!, + $5:\*^30`1.7,O,!,|,?6`.7,6:O,5:/_,2:/OH,3:/NMeMe + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) + endfont; +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +<30,|=1,<-120,60,60,60,-60,60, +60,-60,60,60,60,-60,60,60,=|,1:#, +14:O,13:/*Et,{1,9}://O,{2,10}:*/_, +{4,6^-35,8,12^35}:/*_, +{6^35,11,12^-35}:*/OH, +$3:\*,O,30,|,?6`.7,2:O, +{3,5^35}:/_,4:/OH,5^-35:/O!, +$5:\*^30`1.7,O,!,|,?6`.7,6:O, +5:/_,2:/OH,3:/NMeMe +\end{verbatim} +\end{minipage} +\vspace{7mm}\\ +%---------------------------------------------------------------------------- +\begin{mplibcode} +fsize:=(80mm,35mm); +beginfont("EN:Paclitaxel","MW:853.918") + MCat(0.8,0.5)( + ?6,5=d,3:@,|=1,36,45,45,45,45,=|,$5:#,-4=?6,-4=?4,||,-1=wb,-3=wf,-1:O, + {4^35,4^-35,6}:/_,{3^-60,15}:*/OH,8:/*H^-60,9:*/_^60,10://O, + $1:\,O,!,//O,!,*/OH,!,/Ph,60~wf,NH,-60,//O,60,Ph, + $7:\*,O,-45,//O,60,Ph,$11:*\,O,-60,//O,60,$12:\*^-15,O,60,//O,-60 + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) +endfont +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +?6,5=d,3:@,|=1,36,45,45,45,45,=|,$5:#, +-4=?6,-4=?4,||,-1=wb,-3=wf,-1:O, +{4^35,4^-35,6}:/_,{3^-60,15}:*/OH, +8:/*H^-60,9:*/_^60,10://O, +$1:\,O,!,//O,!,*/OH,!,/Ph, +60~wf,NH,-60,//O,60,Ph, +$7:\*,O,-45,//O,60,Ph,$11:*\,O,-60,//O,60, +$12:\*^-15,O,60,//O,-60) +\end{verbatim} +\end{minipage} +\vspace{7mm}\\ +%---------------------------------------------------------------------------- +\noindent +\begin{mplibcode} +fsize:=(80mm,70mm); +beginfont("NO:6","EN:Vancomycin","MW:1449.25"); + MCat(0.9,0)( + <30, + |=1,!12,{1,3,12}=zf,7=wf,/H^-60,60,*/OH,60, + Ph,-4:/Cl,-3:\,O,!,Ph,-4:\,O,!,Ph,-1^15:/Cl,-3:\,/*OH,*/H^-60,$1:#, + $7:@,$26:#,$1:@,120,//O,60,NH,60,/*H,*/COOH^180,-60, + Ph,{-2,-4}:/OH,-1:\,Ph,-5:/OH,-2:@,$4:#,=|, + {3^40,6,9,12}://O,{2,5,8,11}:NH, + {1^180,4^180}:*/H,{7^-60,10^60,14^60}:/*H, + $10:*\^-60,60,//O,!,NH2, + $13:*\,NH,!,//O,!,/!iPr^-35>60,*/H^60,!~zf,NH,!, + $23:\,O,!,|,?6`.7,2:O,3^10:/!OH,{4,5}:/OH, + -1:\,O,!,|,?6`.7,6:O,{3^35,5}:/_,3^-35:/NH2,4:/OH + ) + ext( + label.lrt("("&inf_EN&")",(0,h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,h-13mm)); + ) +endfont; +\end{mplibcode} +\begin{minipage}[b]{85mm} +\begin{verbatim} +<30,|=1,!12,{1,3,12}=zf,7=wf, +/H^-60,60,*/OH,60,Ph,-4:/Cl, +-3:\,O,!,Ph,-4:\,O,!,Ph,-1^15:/Cl, +-3:\,/*OH,*/H^-60,$1:#, +$7:@,$26:#,$1:@,120,//O,60,NH,60, + /*H,*/COOH^180,-60, +Ph,{-2,-4}:/OH,-1:\,Ph,-5:/OH,-2:@,$4:#,=|, +{3^40,6,9,12}://O,{2,5,8,11}:NH, +{1^180,4^180}:*/H, +{7^-60,10^60,14^60}:/*H, +$10:*\^-60,60,//O,!,NH2,$13:*\,NH,!,//O,!, + /!iPr^-35>60,*/H^60 ,!~zf,NH,!, +$23:\,O,!,|,?6`.7,2:O,3^10:/!OH,{4,5}:/OH, +-1:\,O,!,|,?6`.7,6:O, +{3^35,5}:/_,3^-35:/NH2,4:/OH +\end{verbatim} +\end{minipage} +\vspace{10mm}\\% +%---------------------------------------------------------------------------- +\begin{mplibcode} + fsize:=(170mm,70mm); + beginfont("NO:7","EN:Maitotoxin","MW:3425.86") + MC( + <55.8,?6,-4=?7 ,{-4,-3,-3,-3}=?6,-3:\,!3,?6,{-4,-3,-3,-3}=?6,-3:\,?6,-3=?6, + -3:\,!3,60,<-30,?6,-3=?6,-3:@,30,<30,?6,{-3,-3}=?6,-3=?7,{-4,-3,-3}=?6, + -2:\,?6,-3=?6,-3=?7,{-3,-3}=?6,-3=?8,-3=dl,{-5,-3,-3,-3}=?6, + {5,7,15,16,23,24,32,40,41,48,49,58,59,72,73,82,83,90,91,99, + 100,107,113,114,122,123,130,131,140,141,148,149}:O, + {1^60,2,26,28,29,51,54,61,63,68,75^60,78,109}:*/OH, + {11,20,35,45,52,55,65,69,86}:/*OH,{47,57,71}:/*H^60, + {3,8,13,17,21,33,38,42,56,70,84,92,101,106,111,128,138,142,146,150}:/*H^-60, + {4,14,22,34,39,43,81,89,98,102,116,121,125,129,133}:*/H^60, + {6,46,50,53,60,67,74}:*/H^-60, + {9,18,85,93,112,139,143,147}:*/_`1^60, + {80,88,97,115,120,124}:/*_`1^-60,108:*/_`1^-60, + $6:\,|,!11,60~dr,-60,60,OH,2:/*OH,{7,10}:*/OH,{1,3}:*/_,{8~zf,11~dm,12}:/_, + 6:\,O,30,SOO,30,"O{Na}", + $36:@,-45~zf,O,30,SOO,30,"O{Na}", + $150:\,|,!7,{1,2}:/*OH,4:*/_,5:/*_,7=dl + ) + ext( + label.lrt("("&inf_EN&")",(0,.8h)); + defaultscale:=0.8; + label.lrt("FM(C): "&cal_FM,(0,.8h-5mm)); + label.lrt("MW(C): "&cal_MW,(0,.8h-9mm)); + label.lrt("MW(D): "&inf_MW,(0,.8h-13mm)); + ) + endfont +\end{mplibcode} +\begin{verbatim} + <55.8,?6,-4=?7,{-4,-3,-3,-3}=?6, + -3:\,!3,?6,{-4,-3,-3,-3}=?6,-3:\,?6,-3=?6,-3:\,!3,60,<-30,?6,-3=?6, + -3:@,30,<30,?6,{-3,-3}=?6,-3=?7,{-4,-3,-3}=?6, + -2:\,?6,-3=?6,-3=?7,{-3,-3}=?6,-3=?8,-3=dl,{-5,-3,-3,-3}=?6, + {5,7,15,16,23,24,32,40,41,48,49,58,59,72,73,82,83,90,91,99, + 100,107,113,114,122,123,130,131,140,141,148,149}:O, + {1^60,2,26,28,29,51,54,61,63,68,75^60,78,109}:*/OH, + {11,20,35,45,52,55,65,69,86}:/*OH,{47,57,71}:/*H^60, + {3,8,13,17,21,33,38,42,56,70,84,92,101,106,111,128,138,142,146,150}:/*H^-60, + {4,14,22,34,39,43,81,89,98,102,116,121,125,129,133}:*/H^60, + {6,46,50,53,60,67,74}:*/H^-60,{9,18,85,93,112,139,143,147}:*/_`1^60, + {80,88,97,115,120,124}:/*_`1^-60,108:*/_`1^-60, + $6:\,|,!11,60~dr,-60,60,OH,2:/*OH,{7,10}:*/OH,{1,3}:*/_,{8~zf,11~dm,12}:/_, + 6:\,O,30,SOO,30,"O{Na}", + $36:@,-45~zf,O,30,SOO,30,"O{Na}",$150:\,|,!7,{1,2}:/*OH,4:*/_,5:/*_,7=dl +\end{verbatim} +\vspace{8mm}% +%---------------------------------------------------------------------------- +\newpage +\begin{mplibcode} +beginfont("EN:TCA cycle") +fsize:=(160mm,75mm); +max_blength:=5mm; +%------------------------------------------------------------------------ +MCat(0.33, 1)(<30,O[-1],!0,//O,!,//O,!2,//O,!,O[-1]) +MCat(0.66, 1)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4`1:\,//O,!,O[-1],4:/OH^-165) +MCat(1, 1)(<30,O[-1],!0,//O,!2,!~dr,!,//O,!,O[-1],-4`1:\,//O,!,O[-1]) +MCat(1, 0.55)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(1, 0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(0.66,0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1]) +MCat(0.33,0.05)(<30,O[-1],!0,//O,!3,//O,!,"{S-CoA}") +MCat(0, 0.05)(<30,O[-1],!0,//O,!3,//O,!,O[-1]) +MCat(0, 0.55)(<30,O[-1],!0,//O,!,!~dr,!,//O,!,O[-1]) +MCat(0, 1)(<30,O[-1],!0,//O,!3,//O,!,O[-1],3:/OH) +%------------------------------------------------------------------------- +ext( +defaultfont:="uhvr8r"; +defaultscale:=0.75; +ext_setup; +def sel_dir(expr rot)= + save tx; nA:=rot; if nA>=360: nA:=nA-360; fi + if (nA<30)or(nA>330): def tx=top enddef; elseif (nA>=30)and(nA<=150): def tx=lft enddef; + elseif (nA>150)and(nA<210): def tx=bot enddef; elseif (nA>=210)and(nA<=330): def tx=rt enddef; fi +enddef; +def r_arrow(expr a)(expr r)(expr p)(expr sa,la)(expr sb,lb)(expr sc,lc)(expr sd,ld)= + drawarrow ((0,0)..(a,0)) rotated r shifted p; + if sa<>"": draw ((0.5a,0){dir 180}..{dir 90}(0,.5a*la)) rotated r shifted p; + sel_dir(r); label.tx(sa,p+((0,0.5a*la) rotated r)); fi + if sb<>"": draw ((0.5a,0){dir 0}..{dir 90}(a,.5a*lb)) rotated r shifted p; + sel_dir(r); label.tx(sb,p+((a,0.5a*lb) rotated r)); fi + if sc<>"": draw ((0.5a,0){dir 180}..{dir -90}(0,-.5a*lc)) rotated r shifted p; + sel_dir(r+180); label.tx(sc,p+((0,-0.5a*lc) rotated r)); fi + if sd<>"": draw ((0.5a,0){dir 0}..{dir -90}(a,-.5a*ld)) rotated r shifted p; + sel_dir(r+180); label.tx(sd,p+((a,-0.5a*ld) rotated r)); fi +enddef; +%------------------------------------------------------------------------ +save dx; pair dx; dx:=(12mm,0); +label.bot("Oxaloacetate",p1+dx); label.bot("Citrate",p2+dx); +label.bot("cis-Aconitate",p3+dx); label.bot("Isocitrate",p4+dx); +label.bot("Oxalosuccinate",p5+dx); label.bot("alfa-Ketoglutarate",p6+dx); +label.bot("Succinyl-CoA",p7+dx); label.bot("Succinate",p8+dx); +label.bot("Fumarate",p9+dx); label.bot("L-Malate",p10+dx); +sw_label_emu:=1; +ext_setup; +r_arrow(10mm)( 0)(p1+(1.1w1,.3h1))("",0)("",0)("Acetyl-CoA",1.5)(" CoA-SH",1); +r_arrow(10mm)( 0)(p2+(1.1w2,.4h2))("",0)("",0)("",0)("H_2_O",1); +r_arrow( 8mm)(270)(p3+(.5w3,-.4h3))("",0)("",0)("H_2_O",1)("",0); +r_arrow( 8mm)(270)(p4+(.5w4,-.4h4))("",0)("",0)("NAD^+",1)("NADH2^+",1); +r_arrow(10mm)(180)(p5+(-.1w5,.4h5))("",0)("",0)("",0)("CO_2_",1); +r_arrow(10mm)(180)(p6+(-.1w6,.5h6))("",0)("",0)("NAD^+^,CoA-SH",1.7)("NADH2^+^,CO_2",1); +r_arrow(10mm)(180)(p7+(-.1w7,.5h7))("",0)("",0)("GDP,Pi",1.7)("GTP,CoA-SH",1); +r_arrow( 8mm)( 90)(p8+(.4w8,1.2h8))("",0)("",0)("FAD",1)("FADH2",1); +r_arrow( 8mm)( 90)(p9+(.4w9,1.2h9))("",0)("",0)("H_2_O",1)("",0); +r_arrow(10mm)( 0)(p10+(1.1w10,.3h10))("",0)("",0)("NAD^+",1)("NADH2^+",1.5); +defaultscale:=1.5; +label("TCA-cycle",(0.5w,0.5h)); +) +endfont +\end{mplibcode} +\begin{verbatim} +beginfont("EN:TCA cycle") +fsize:=(160mm,75mm); +max_blength:=5mm; +MCat(0.33, 1)(<30,O[-1],!0,//O,!,//O,!2,//O,!,O[-1]) +MCat(0.66, 1)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4`1:\,//O,!,O[-1],4:/OH^-165) +MCat(1, 1)(<30,O[-1],!0,//O,!2,!~dr,!,//O,!,O[-1],-4`1:\,//O,!,O[-1]) +MCat(1, 0.55)(<30,O[-1],!0,//O,!4,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(1, 0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1],-4:\`1,//O,!,O[-1]) +MCat(0.66,0.05)(<30,O[-1],!0,//O,!3,//O,!,//O,!,O[-1]) +MCat(0.33,0.05)(<30,O[-1],!0,//O,!3,//O,!,"{S-CoA}") +MCat(0, 0.05)(<30,O[-1],!0,//O,!3,//O,!,O[-1]) +MCat(0, 0.55)(<30,O[-1],!0,//O,!,!~dr,!,//O,!,O[-1]) +MCat(0, 1)(<30,O[-1],!0,//O,!3,//O,!,O[-1],3:/OH) +ext( +defaultfont:="uhvr8r"; +defaultscale:=0.75; +ext_setup; +save dx; pair dx; dx:=(12mm,0); +label.bot("Oxaloacetate",p1+dx); label.bot("Citrate",p2+dx); +label.bot("cis-Aconitate",p3+dx); label.bot("Isocitrate",p4+dx); +label.bot("Oxalosuccinate",p5+dx); label.bot("alfa-Ketoglutarate",p6+dx); +label.bot("Succinyl-CoA",p7+dx); label.bot("Succinate",p8+dx); +label.bot("Fumarate",p9+dx); label.bot("L-Malate",p10+dx); +sw_label_emu:=1; +ext_setup; +r_arrow(10mm)( 0)(p1+(1.1w1,.3h1))("",0)("",0)("Acetyl-CoA",1.5)(" CoA-SH",1); +r_arrow(10mm)( 0)(p2+(1.1w2,.4h2))("",0)("",0)("",0)("H_2_O",1); +r_arrow( 8mm)(270)(p3+(.5w3,-.4h3))("",0)("",0)("H_2_O",1)("",0); +r_arrow( 8mm)(270)(p4+(.5w4,-.4h4))("",0)("",0)("NAD^+",1)("NADH2^+",1); +r_arrow(10mm)(180)(p5+(-.1w5,.4h5))("",0)("",0)("",0)("CO_2_",1); +r_arrow(10mm)(180)(p6+(-.1w6,.5h6))("",0)("",0)("NAD^+^,CoA-SH",1.7)("NADH2^+^,CO_2",1); +r_arrow(10mm)(180)(p7+(-.1w7,.5h7))("",0)("",0)("GDP,Pi",1.7)("GTP,CoA-SH",1); +r_arrow( 8mm)( 90)(p8+(.4w8,1.2h8))("",0)("",0)("FAD",1)("FADH2",1); +r_arrow( 8mm)( 90)(p9+(.4w9,1.2h9))("",0)("",0)("H_2_O",1)("",0); +r_arrow(10mm)( 0)(p10+(1.1w10,.3h10))("",0)("",0)("NAD^+",1)("NADH2^+",1.5); +defaultscale:=1.5; +label("TCA-cycle",(0.5w,0.5h)); +) +endfont +\end{verbatim} +%---------------------------------------------------------------------------- +\end{document} |