blob: e65c6f7734f235744f257baa57e02af4f8e9dc75 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
|
BayesNet
========
TikZ library for drawing Bayesian networks, graphical models and (directed) factor
graphs in LaTeX.
Contents
--------
Provides the following node styles:
* :code:`latent`
* :code:`obs`
* :code:`det`
* :code:`const`
* :code:`factor`
* :code:`plate`
* :code:`gate`
Provides the following commands (note that any of the arguments can be
empty):
* :code:`\factor [options] {name} {caption} {inputs} {outputs}`
* :code:`\plate [options] {name} {fitlist} {caption}`
* :code:`\gate [options] {name} {fitlist} {inputs}`
* :code:`\vgate {name} {fitlist-left} {caption-left} {fitlist-right}
{caption-right} {inputs}`
* :code:`\hgate {name} {fitlist-top} {caption-top} {fitlist-bottom}
{caption-bottom} {inputs}`
* :code:`\edge [options] {inputs} {outputs}`
* :code:`\factoredge [options] {inputs} {factors} {outputs}`
Usage
-----
Install the package by copying tikzlibrarybayesnet.code.tex to your
LaTeX system or copy the file into projects that are using it. To use
the library in your LaTeX file
.. code-block:: python
\usepackage{tikz}
\usetikzlibrary{bayesnet}
Compile the LaTeX example:
.. code-block:: none
pdflatex example.tex
and see the resulting PDF file example.pdf.
Example
-------
.. figure:: http://i.imgur.com/CzNyk.png
:align: center
:alt: Bayesian network.
PCA model as a Bayesian network and a directed factor graph.
.. figure:: http://i.imgur.com/CBZqL.png
:align: center
:alt: Citation influence model
Directed factor graph of the citation influence model.
Related projects
----------------
This library is derived from a technical report "Directed Factor Graph
Notation for Generative Models" and the accompanying TikZ macros by
Laura Dietz 2010 (http://people.cs.umass.edu/~dietz/).
GraphViz (http://www.graphviz.org/) is a more general open source
graph visualization software. It uses DOT file format to describe the
structure of the graph. The DOT file can be converted to LaTeX using
:code:`dot2tex` (http://www.fauskes.net/code/dot2tex/).
UAI (http://graphmod.ics.uci.edu/uai08/FileFormat) is a simple text
file format to describe Markov networks. The UAI file format can be
converted to DOT file format using :code:`uai2dot`
(https://github.com/drewfrank/uai2dot).
License
-------
| Copyright (C) 2010-2011 Laura Dietz
| Copyright (C) 2012 Jaakko Luttinen jaakko.luttinen@aalto.fi
This work may be distributed and/or modified under the conditions of
the LaTeX Project Public License, either version 1.3 of this license
or (at your option) any later version. The license is in the file
LICENSE_LPPL and the latest version of this license is in
http://www.latex-project.org/lppl.txt and version 1.3 or later is part
of all distributions of LaTeX version 2005/12/01 or later.
This work is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version. This work is distributed in the hope that
it will be useful, but WITHOUT ANY WARRANTY; without even the implied
warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See
the GNU General Public License for more details. See the license in
the file LICENSE_GPL or visit <http://www.gnu.org/licenses/>.
|
