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-rw-r--r--Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex56
1 files changed, 29 insertions, 27 deletions
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
index c551c31b267..d5e694c8ca4 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
@@ -1,5 +1,5 @@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Molecular Coding Format manual by Akira Yamaji 2018.01.03
+% Molecular Coding Format manual by Akira Yamaji 2018.04.16
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\documentclass[a4paper]{article}
%%%%\documentclass[a4paper,twoside]{article}
@@ -102,7 +102,7 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
real number plus (+): Counterclockwize
real number minus(-): Clockwize
- <15,-30,45,-45,30,-30,60
+ <10,-30,45,-45,30,-30,60
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -134,24 +134,22 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
%-----------------------------------------------------------------------------
\subsubsection{Branch bond}
\begin{verbatim}
- 2:\ : 2:@,0
- 4:*\ : 4:@,0~wf
- 6:\* : 6:@,0~zf
- 8:\\ : 8:@,0~dm
+ 2:\ : 2:@,0
+ 4:*\ : 4:@,0~wf
+ 6:\* : 6:@,0~zf
+ 8:\\ : 8:@,0~dm
+ 10:*\* : 10:@,0~wv
- <30,!8,2:\,!,4:*\,!,6:\*,!,8:\\,!
+ <30,!8,
+ 2:\,!,4:*\,!,6:\*,!,8:\\,!,10:*\*,!
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
\begin{verbatim}
- 2:\~dr : 2:@,0~dr
- 4:\`1.5 : 4:@,0`1.5
- 6:\^15 : 6:@,0^15
-
<-30,!6,
- 2:\~dr,!,
- 4:\`1.5,-90,
- 6:\^15,-60
+ 2:\~dr,!, : 2:@,0~dr,!
+ 4:\`1.5,-90, : 4:@,0`1.5,-90
+ 6:\^15,-60 : 6:@,0^15,-60
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -448,17 +446,18 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
%-----------------------------------------------------------------------------
\subsubsection{Insert modified substituent}
\begin{verbatim}
- // : double (double middle)
- */ : wedge forward
- /* : wedge dotted forward
- ** : direct
+ // : double (double middle)
+ */ : wedge forward
+ /* : wedge dotted forward
+ */* : wave
+ ** : direct
- <30,!,//O,!,/*H,!,*/H,!,/?3,!,**?3,!
+ <30,!,//O,!2,/*H,!2,*/H,!2,*/*H,!2,**?3,!
\end{verbatim}
\MCFstructure
\vspace{-3mm}%
\begin{verbatim}
- // /* */ **
+ // /* */ */* **
\end{verbatim}
%-----------------------------------------------------------------------------
\begin{verbatim}
@@ -467,8 +466,8 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
` : change length
> : change enviroment
- <30,``1,!,/_~zf`2^30,
- !2,*/!2>lr,!2,*/!2>rl,!)
+ <30,``1,!,
+ /_`2^30,!2,/!2>lr,!2,/!2>rl,!)
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -493,7 +492,7 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
^,`,> : change angle,length,environment
<30,!7`1,
- 3:/*_`2^30,5:*/!2>lr,7:*/!2>rl
+ 3:/_`2^30,5:/!2>lr,7:/!2>rl
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -566,8 +565,10 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
\begin{verbatim}
|< : start brock
>| : end brock
+ |<=n : |<,``n
<30,!2,|<,``1.2,!2,>|,!2
+ <30,!2,|<=1.2,!2,>|,!2
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -983,8 +984,9 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
b: ratio molecular hight/font hight
beginfont()
- MCc(1,1)(<30,?6)
- MCc(0.5,0.5)(<30,?6)
+ MCc(1 ,1 )(?6)
+ MCc(0.75,0.75)(?6)
+ MCc(0.5 ,0.5 )(?6)
endfont
\end{verbatim}
\MCFstructure
@@ -1262,7 +1264,7 @@ drawarrow & drawdblarrow:
<-30,O,!,//O,!,!,Ph,
$1:@,-120~zb,
|,?7,6:*\^190`1.02,N,/_,3~wb:&,
- $3:\~wv,!,OH
+ $3:*\*,!,OH
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -1293,7 +1295,7 @@ drawarrow & drawdblarrow:
%-----------------------------------------------------------------------------
\subsection{Paclitaxel}
\begin{verbatim}
- ?6,5=d,3:@,|<,``1,36,45,45,45,45,>|,$5:&,
+ ?6,5=d,3:@,|<=1,36,45,45,45,45,>|,$5:&,
-4=?6,-4=?4,-1=wb,-3=wf,-1:O,||,
{4^35,4^-35,6}:/_,{3^-60,15}:*/OH,
8:/*H^-60,9:*/_^60,10://O,