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-rw-r--r--Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex48
1 files changed, 26 insertions, 22 deletions
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
index 59c0dae4a53..c551c31b267 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
@@ -1,5 +1,5 @@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Molecular Coding Format manual by Akira Yamaji 2017.09.15
+% Molecular Coding Format manual by Akira Yamaji 2018.01.03
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\documentclass[a4paper]{article}
%%%%\documentclass[a4paper,twoside]{article}
@@ -64,15 +64,19 @@
\date{\today}
\maketitle
\begin{center} Located at http://www.ctan.org/pkg/mcf2graph \end{center}
+\begin{center} Suggestion or request mail to: mcf2graph@gmail.com \end{center}
%-----------------------------------------------------------------------------
\thispagestyle{empty}
-\vspace{10mm}
+\vspace{3mm}%
+\begin{center}
{\@strufont%
-\makebox[10mm]{}\char1 \raisebox{10mm}{\char2 }\char3 \raisebox{10mm}{\char4}\\
-\makebox[10mm]{}\char5 \raisebox{10mm}{\char6 }\char7 \raisebox{10mm}{\char8}\\
-\makebox[10mm]{}\char9 \raisebox{10mm}{\char10}\char11\raisebox{10mm}{\char12}\\
-\makebox[10mm]{}\char13\raisebox{10mm}{\char14}\char15\raisebox{10mm}{\char16}\\
-\makebox[10mm]{}\char17\raisebox{10mm}{\char18}\char19\raisebox{10mm}{\char20}\\}
+\char1 \raisebox{10mm}{\char2 }\char3 \raisebox{10mm}{\char4}\\
+\char5 \raisebox{10mm}{\char6 }\char7 \raisebox{10mm}{\char8}\\
+\char9 \raisebox{10mm}{\char10}\char11\raisebox{10mm}{\char12}\\
+\char13\raisebox{10mm}{\char14}\char15\raisebox{10mm}{\char16}\\
+\char17\raisebox{10mm}{\char18}\char19\raisebox{10mm}{\char20}\\
+}%
+\end{center}
%-----------------------------------------------------------------------------
\twocolumn
\thispagestyle{empty}
@@ -95,8 +99,8 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
\subsection{Make bond}
\subsubsection{Chain}
\begin{verbatim}
- real number plus (+): anticlockwize
- real number minus(-): clockwize
+ real number plus (+): Counterclockwize
+ real number minus(-): Clockwize
<15,-30,45,-45,30,-30,60
\end{verbatim}
@@ -153,16 +157,16 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\
%-----------------------------------------------------------------------------
\subsubsection{Connect atom}
\begin{verbatim}
- &n : Connect to An
+ n:& : Connect to An
- <30,!6,3:\,!,&5~bd
+ <30,!6,3:\,!,5~bd:&
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
\subsubsection{Ring}
\begin{verbatim}
?n : n membered ring(3<=n<=20)
- ?6 : <-120,60,60,60,60,60,&1
+ ?6 : <-120,60,60,60,60,60,1:&
?6
\end{verbatim}
\MCFstructure
@@ -1170,7 +1174,7 @@ drawarrow & drawdblarrow:
%-----------------------------------------------------------------------------
\subsection{Endosulfan}
\begin{verbatim}
- <26,?7,7=?6[13],11:@,208~wf`1.45,&8~wb,
+ <26,?7,7=?6[13],11:@,208~wf`1.45,8~wb:&,
10=d,{3,5}:O,4:S,4://O,
{8,9,10,11,12^-210,12^-150}:/Cl
\end{verbatim}
@@ -1235,9 +1239,9 @@ drawarrow & drawdblarrow:
\subsection{Gibberellin}
\begin{verbatim}
<18,?5,3=?7,5=?6[12],
- 8:@,160`1.3,&3,
+ 8:@,160`1.3,3:&,
13=dl,6=wf,8=wb,
- 5:@,40~zf`1,O,60,//O^180,&14~zb,
+ 5:@,40~zf`1,O,60,//O^180,14~zb:&,
2:/COOH,7://_,13:*/OH,8:/*OH,
14:*/_,{1^60,4^60}:*/H
\end{verbatim}
@@ -1249,7 +1253,7 @@ drawarrow & drawdblarrow:
10:\,*/OH,/H~zf^-60,!,
|,?6,2:N,1:*/H^60,
4:*\,!!,
- 2:@,165~zf,60,&5~zb
+ 2:@,165~zf,60,5~zb:&
\end{verbatim}
\MCFstructure
%-----------------------------------------------------------------------------
@@ -1257,7 +1261,7 @@ drawarrow & drawdblarrow:
\begin{verbatim}
<-30,O,!,//O,!,!,Ph,
$1:@,-120~zb,
- |,?7,6:*\^190`1.02,N,/_,&3~wb,
+ |,?7,6:*\^190`1.02,N,/_,3~wb:&,
$3:\~wv,!,OH
\end{verbatim}
\MCFstructure
@@ -1289,7 +1293,7 @@ drawarrow & drawdblarrow:
%-----------------------------------------------------------------------------
\subsection{Paclitaxel}
\begin{verbatim}
- ?6,5=d,3:@,|<,``1,36,45,45,45,45,>|,&$5,
+ ?6,5=d,3:@,|<,``1,36,45,45,45,45,>|,$5:&,
-4=?6,-4=?4,-1=wb,-3=wf,-1:O,||,
{4^35,4^-35,6}:/_,{3^-60,15}:*/OH,
8:/*H^-60,9:*/_^60,10://O,
@@ -1349,8 +1353,8 @@ endfont > end font
%------------------------------------------------------------------------
beginfont("NO:5","EN:Gibberellin A3"); > begin font(information)
MCf(<18,?5,3=?7,5=?6[12], > begin MCF (5)
- 8:@,160`1.3,&3,13=dl,6=wf,8=wb, >
- 5:@,40~zf`1,O,60,//O^180,&14~zb, >
+ 8:@,160`1.3,3:&,13=dl,6=wf,8=wb, >
+ 5:@,40~zf`1,O,60,//O^180,14~zb:&, >
2:/COOH,7://_,13:*/OH,8:/*OH, >
14:*/_,{1^60,4^60}:*/H) > end MCF
endfont; > end font
@@ -1585,8 +1589,8 @@ M END
font_wd:=50mm; font_ht:=50mm;
beginfont("NO:4","EN:Gibberellin A3","MW:346.37");
MCf(<18,?5,3=?7,5=?6[12],
- 8:@,160`1.3,&3,13=dl,6=wf,8=wb,
- 5:@,40~zf`1,O,60,//O^180,&14~zb,
+ 8:@,160`1.3,3:&,13=dl,6=wf,8=wb,
+ 5:@,40~zf`1,O,60,//O^180,14~zb:&,
2:/COOH,7://_,13:*/OH,8:/*OH,
14:*/_,{1^60,4^60}:*/H
)