diff options
Diffstat (limited to 'Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex')
-rw-r--r-- | Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex | 48 |
1 files changed, 26 insertions, 22 deletions
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex index 59c0dae4a53..c551c31b267 100644 --- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex +++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex @@ -1,5 +1,5 @@ %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% Molecular Coding Format manual by Akira Yamaji 2017.09.15 +% Molecular Coding Format manual by Akira Yamaji 2018.01.03 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% \documentclass[a4paper]{article} %%%%\documentclass[a4paper,twoside]{article} @@ -64,15 +64,19 @@ \date{\today} \maketitle \begin{center} Located at http://www.ctan.org/pkg/mcf2graph \end{center} +\begin{center} Suggestion or request mail to: mcf2graph@gmail.com \end{center} %----------------------------------------------------------------------------- \thispagestyle{empty} -\vspace{10mm} +\vspace{3mm}% +\begin{center} {\@strufont% -\makebox[10mm]{}\char1 \raisebox{10mm}{\char2 }\char3 \raisebox{10mm}{\char4}\\ -\makebox[10mm]{}\char5 \raisebox{10mm}{\char6 }\char7 \raisebox{10mm}{\char8}\\ -\makebox[10mm]{}\char9 \raisebox{10mm}{\char10}\char11\raisebox{10mm}{\char12}\\ -\makebox[10mm]{}\char13\raisebox{10mm}{\char14}\char15\raisebox{10mm}{\char16}\\ -\makebox[10mm]{}\char17\raisebox{10mm}{\char18}\char19\raisebox{10mm}{\char20}\\} +\char1 \raisebox{10mm}{\char2 }\char3 \raisebox{10mm}{\char4}\\ +\char5 \raisebox{10mm}{\char6 }\char7 \raisebox{10mm}{\char8}\\ +\char9 \raisebox{10mm}{\char10}\char11\raisebox{10mm}{\char12}\\ +\char13\raisebox{10mm}{\char14}\char15\raisebox{10mm}{\char16}\\ +\char17\raisebox{10mm}{\char18}\char19\raisebox{10mm}{\char20}\\ +}% +\end{center} %----------------------------------------------------------------------------- \twocolumn \thispagestyle{empty} @@ -95,8 +99,8 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\ \subsection{Make bond} \subsubsection{Chain} \begin{verbatim} - real number plus (+): anticlockwize - real number minus(-): clockwize + real number plus (+): Counterclockwize + real number minus(-): Clockwize <15,-30,45,-45,30,-30,60 \end{verbatim} @@ -153,16 +157,16 @@ pk font,PNG,SVG,EPS or MDL MOL file(V2000).\\ %----------------------------------------------------------------------------- \subsubsection{Connect atom} \begin{verbatim} - &n : Connect to An + n:& : Connect to An - <30,!6,3:\,!,&5~bd + <30,!6,3:\,!,5~bd:& \end{verbatim} \MCFstructure %----------------------------------------------------------------------------- \subsubsection{Ring} \begin{verbatim} ?n : n membered ring(3<=n<=20) - ?6 : <-120,60,60,60,60,60,&1 + ?6 : <-120,60,60,60,60,60,1:& ?6 \end{verbatim} \MCFstructure @@ -1170,7 +1174,7 @@ drawarrow & drawdblarrow: %----------------------------------------------------------------------------- \subsection{Endosulfan} \begin{verbatim} - <26,?7,7=?6[13],11:@,208~wf`1.45,&8~wb, + <26,?7,7=?6[13],11:@,208~wf`1.45,8~wb:&, 10=d,{3,5}:O,4:S,4://O, {8,9,10,11,12^-210,12^-150}:/Cl \end{verbatim} @@ -1235,9 +1239,9 @@ drawarrow & drawdblarrow: \subsection{Gibberellin} \begin{verbatim} <18,?5,3=?7,5=?6[12], - 8:@,160`1.3,&3, + 8:@,160`1.3,3:&, 13=dl,6=wf,8=wb, - 5:@,40~zf`1,O,60,//O^180,&14~zb, + 5:@,40~zf`1,O,60,//O^180,14~zb:&, 2:/COOH,7://_,13:*/OH,8:/*OH, 14:*/_,{1^60,4^60}:*/H \end{verbatim} @@ -1249,7 +1253,7 @@ drawarrow & drawdblarrow: 10:\,*/OH,/H~zf^-60,!, |,?6,2:N,1:*/H^60, 4:*\,!!, - 2:@,165~zf,60,&5~zb + 2:@,165~zf,60,5~zb:& \end{verbatim} \MCFstructure %----------------------------------------------------------------------------- @@ -1257,7 +1261,7 @@ drawarrow & drawdblarrow: \begin{verbatim} <-30,O,!,//O,!,!,Ph, $1:@,-120~zb, - |,?7,6:*\^190`1.02,N,/_,&3~wb, + |,?7,6:*\^190`1.02,N,/_,3~wb:&, $3:\~wv,!,OH \end{verbatim} \MCFstructure @@ -1289,7 +1293,7 @@ drawarrow & drawdblarrow: %----------------------------------------------------------------------------- \subsection{Paclitaxel} \begin{verbatim} - ?6,5=d,3:@,|<,``1,36,45,45,45,45,>|,&$5, + ?6,5=d,3:@,|<,``1,36,45,45,45,45,>|,$5:&, -4=?6,-4=?4,-1=wb,-3=wf,-1:O,||, {4^35,4^-35,6}:/_,{3^-60,15}:*/OH, 8:/*H^-60,9:*/_^60,10://O, @@ -1349,8 +1353,8 @@ endfont > end font %------------------------------------------------------------------------ beginfont("NO:5","EN:Gibberellin A3"); > begin font(information) MCf(<18,?5,3=?7,5=?6[12], > begin MCF (5) - 8:@,160`1.3,&3,13=dl,6=wf,8=wb, > - 5:@,40~zf`1,O,60,//O^180,&14~zb, > + 8:@,160`1.3,3:&,13=dl,6=wf,8=wb, > + 5:@,40~zf`1,O,60,//O^180,14~zb:&, > 2:/COOH,7://_,13:*/OH,8:/*OH, > 14:*/_,{1^60,4^60}:*/H) > end MCF endfont; > end font @@ -1585,8 +1589,8 @@ M END font_wd:=50mm; font_ht:=50mm; beginfont("NO:4","EN:Gibberellin A3","MW:346.37"); MCf(<18,?5,3=?7,5=?6[12], - 8:@,160`1.3,&3,13=dl,6=wf,8=wb, - 5:@,40~zf`1,O,60,//O^180,&14~zb, + 8:@,160`1.3,3:&,13=dl,6=wf,8=wb, + 5:@,40~zf`1,O,60,//O^180,14~zb:&, 2:/COOH,7://_,13:*/OH,8:/*OH, 14:*/_,{1^60,4^60}:*/H ) |