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author | Karl Berry <karl@freefriends.org> | 2014-08-10 22:27:52 +0000 |
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committer | Karl Berry <karl@freefriends.org> | 2014-08-10 22:27:52 +0000 |
commit | 6eb3e6a2778a750325a70ecfbfd91a848820b95e (patch) | |
tree | 65a5aefe8b82cadb58d0b751a8f67c941f49c707 /Master/texmf-dist | |
parent | 42bcd08cc7a71e0192916020b1ace6838c3c21cb (diff) |
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diff --git a/Master/texmf-dist/doc/latex/chemformula/README b/Master/texmf-dist/doc/latex/chemformula/README new file mode 100644 index 00000000000..c849b1328ae --- /dev/null +++ b/Master/texmf-dist/doc/latex/chemformula/README @@ -0,0 +1,32 @@ +-------------------------------------------------------------------------- +the CHEMFORMULE package v4.7 2014/08/08 + + typeset chemical compounds and reactions + +-------------------------------------------------------------------------- +Clemens Niederberger +Web: https://github.com/cgnieder/chemformula/ +E-Mail: contact@mychemistry.eu +-------------------------------------------------------------------------- +Copyright 2011-2014 Clemens Niederberger + +This work may be distributed and/or modified under the +conditions of the LaTeX Project Public License, either version 1.3 +of this license or (at your option) any later version. +The latest version of this license is in + http://www.latex-project.org/lppl.txt +and version 1.3 or later is part of all distributions of LaTeX +version 2005/12/01 or later. + +This work has the LPPL maintenance status `maintained'. + +The Current Maintainer of this work is Clemens Niederberger. +-------------------------------------------------------------------------- +The chemformula package consists of the following files + - chemformula.sty, + - chemformula_en.tex, chemformula_en.pdf, + - README +-------------------------------------------------------------------------- +If you have any ideas, questions, suggestions or bugs to report, please +feel free to contact me. +-------------------------------------------------------------------------- diff --git a/Master/texmf-dist/doc/latex/chemformula/chemformula_en.pdf b/Master/texmf-dist/doc/latex/chemformula/chemformula_en.pdf Binary files differnew file mode 100644 index 00000000000..f4f5cd2fa14 --- /dev/null +++ b/Master/texmf-dist/doc/latex/chemformula/chemformula_en.pdf diff --git a/Master/texmf-dist/doc/latex/chemformula/chemformula_en.tex b/Master/texmf-dist/doc/latex/chemformula/chemformula_en.tex new file mode 100644 index 00000000000..42aa31c189b --- /dev/null +++ b/Master/texmf-dist/doc/latex/chemformula/chemformula_en.tex @@ -0,0 +1,1604 @@ +% arara: pdflatex +% !arara: biber +% !arara: pdflatex +% arara: pdflatex +% -------------------------------------------------------------------------- +% the CHEMFORMULA package +% +% typeset chemical compounds and reactions +% +% -------------------------------------------------------------------------- +% Clemens Niederberger +% -------------------------------------------------------------------------- +% https://github.com/cgnieder/chemformula/ +% contact@mychemistry.eu +% -------------------------------------------------------------------------- +% If you have any ideas, questions, suggestions or bugs to report, please +% feel free to contact me. +% -------------------------------------------------------------------------- +% Copyright 2011-2013 Clemens Niederberger +% +% This work may be distributed and/or modified under the +% conditions of the LaTeX Project Public License, either version 1.3 +% of this license or (at your option) any later version. +% The latest version of this license is in +% http://www.latex-project.org/lppl.txt +% and version 1.3 or later is part of all distributions of LaTeX +% version 2005/12/01 or later. +% +% This work has the LPPL maintenance status `maintained'. +% +% The Current Maintainer of this work is Clemens Niederberger. +% -------------------------------------------------------------------------- +\documentclass[load-preamble+]{cnltx-doc} +\usepackage[utf8]{inputenc} +\usepackage[greek=newtx]{chemmacros} +\setcnltx{ + package = {chemformula}, + url = https://github.com/cgnieder/chemformula/ , + authors = Clemens Niederberger , + email = contact@mychemistry.eu , + abstract = {% + \centering + \includegraphics{chemmacros-logo.pdf} + \par + } , + add-cmds = { + ce, ch, charrow, chcpd, chemformula@bondlength, chemsetup, chlewis, + chname, + DeclareChemArrow, DeclareChemBond, DeclareChemBondAlias, + mch, + NewChemArrow, NewChemBond, NewChemBondAlias, + ox, OX, + pch, + redox, RenewChemArrow, RenewChemBond, + setchemformula, ShowChemArrow, ShowChemBond + } , + add-silent-cmds = { + addplot, + chemfig, + DeclareInstance, draw, + sample, setatomsep, + usetikzlibrary + } +} + +\usepackage{chemfig,booktabs,cancel,varioref} +\usepackage[version=3]{mhchem} + +\expandafter\def\csname libertine@figurestyle\endcsname{LF} +\usepackage[libertine]{newtxmath} +\expandafter\def\csname libertine@figurestyle\endcsname{OsF} + +\usepackage[biblatex]{embrac} +\ChangeEmph{[}[,.02em]{]}[.055em,-.08em] +\ChangeEmph{(}[-.01em,.04em]{)}[.04em,-.05em] + +\usepackage[accsupp]{acro} +\acsetup{ + long-format = \scshape , + short-format = \scshape +} +\DeclareAcronym{iupac}{ + short = iupac , + long = International Union of Pure and Applied Chemistry , + pdfstring = IUPAC , + accsupp = IUPAC +} + +\chemsetup{ + option/synchronize , + chemformula/format = \libertineLF +} + +\sisetup{ + detect-mode=false, + mode=text, + text-rm=\libertineLF +} + +\usepackage{filecontents} + +\defbibheading{bibliography}{\addsec{References}} +\addbibresource{\jobname.bib} +\begin{filecontents*}{\jobname.bib} +@book{iupac:greenbook, + author = {E. Richard Cohan and Tomislav Cvita\v{s} and Jeremy G. Frey and + Bertil Holmstr\"om and Kozo Kuchitsu and Roberto Marquardt and Ian Mills and + Franco Pavese and Martin Quack and J\"urgen Stohner and Herbert L. Strauss and + Michio Takami and Anders J Thor} , + title = {``Quantities, Symbols and Units in Physical Chemistry'', \acs{iupac} + Green Book} , + sorttitle = {Quantities, Symbols and Units in Physical Chemistry} , + indexsorttitle = {Quantities, Symbols and Units in Physical Chemistry} , + edition = {3rd Edition. 2nd Printing} , + year = {2008} , + publisher = {\acs{iupac} \&\ RSC Publishing, Cambridge} +} +\end{filecontents*} + +\DeclareInstance{xfrac}{chemformula-text-frac}{text} + { + scale-factor = 1 , + denominator-bot-sep = -.2ex , + denominator-format = \scriptsize #1 , + numerator-top-sep = -.2ex , + numerator-format = \scriptsize #1 , + slash-right-kern = .05em , + slash-left-kern = .05em + } + +\newpackagename\chemmacros{chemmacros} + +\newidxcmd\manual{\textsf{#1}}[\ (manual)] +\newidxcmd\arrowtype{\code{#1}}[\ (arrow type)] + +\makeatletter +\newcommand*\cf@arrow{% + \@ifstar + {\cf@arrow@star} + {\cf@arrow@nostar}% +} +\newrobustcmd*\cf@arrow@star[1]{% + \@ifnextchar[ + {\cf@arrow@star@opt{#1}} + {\cf@arrow@star@opt{#1}[]}% +} +\newrobustcmd*\cf@arrow@nostar[1]{% + \@ifnextchar[ + {\cf@arrow@nostar@opt{#1}} + {\cf@arrow@nostar@opt{#1}[]}% +} +\def\cf@arrow@star@opt#1[#2]{% + \ifblank{#2} + {\item\arrowtype*{#1}} + {\item\arrowtype*{#1}#2}% + \cnltx@checkdefault{\hfill\newline}% +} +\def\cf@arrow@nostar@opt#1[#2]{% + \ifblank{#2} + {\item\arrowtype{#1}} + {\item\arrowtype{#1}#2}% + \cnltx@checkdefault{\hfill\newline}% +} + +\newenvironment{codedesc} + {% + \def\Code##1{\item\code{##1}\hfill\newline}% + \cnltxlist + } + {\endcnltxlist} + +\newenvironment{arrows} + {% + \let\arrow\cf@arrow + \cnltxlist + } + {\endcnltxlist} +\makeatother + +\renewcommand*\AmS{\hologo{AmS}} + +\newcommand*\TikZ{Ti\textit{k}Z} + +\newname\hensel{Martin Hensel} + +\BeforeBeginEnvironment{example}{\vspace{\baselineskip}} +\AfterEndEnvironment{example}{\vspace{\baselineskip}} +\BeforeBeginEnvironment{sourcecode}{\vspace{\baselineskip}} +\AfterEndEnvironment{sourcecode}{\vspace{\baselineskip}} + +\begin{document} + +\section{Introduction} +Probably every chemist using \LaTeXe\ is aware of the great \pkg{mhchem} +package by \hensel. There have always been some difficulties intertwining it +with the \chemmacros{} package, though. Also, some other minor points in +\pkg{mhchem} always bothered me, but they hardly seemed enough for a new +package. They weren't even enough for a feature request to the \pkg{mhchem} +author. The challenge and the fun of creating a new package and the wish for +a highly customizable alternative led to \chemformula{} after all. + +\chemformula{} works very similar to \pkg{mhchem} but is more strict as to how +compounds, stoichiometric factors and arrows are input. In the same time +\chemformula{} offers \emph{many} possibilities to customize the output. + +\section{News} +\subsection{Version 4.0} +Since version 4.0\sinceversion{4.0}, the \chemformula{} package can be used +independently from \chemmacros. This means that if you say +\begin{sourcecode} + \usepackage{chemformula} +\end{sourcecode} +then \chemmacros\ will not be loaded. The \chemmacros\ package, however, +\emph{will} load \chemformula. + +\subsection{Version 4.2} +\begin{itemize} + \item New option \option{arrow-style}. + \item New command \cs{chlewis} that allows to add Lewis electrons to an + atom, see section~\ref{sec:lewis-formulae}. +\end{itemize} + +\subsection{Version 4.3} +\begin{itemize} + \item New option \option{stoich-print}. + \item New command \cs{chstoich}. + \item The commands \cs*{DeclareChem\meta{...}} now don't give an error any + more if the command already exists. This is more consistent with \LaTeX's + \cs*{DeclareRobustCommand}. For all those commands a version + \cs*{NewChem\meta{...}} is introduced that \emph{does} give an error if + the new command is already defined. +\end{itemize} + +\subsection{Version 4.4} +\begin{itemize} + \item A single dash \code{-} in \cs{ch} is now treated as a minus sign. + This is consistent with the behaviour of a \code{+}. +\end{itemize} + +\subsection{Version 4.5} +\begin{itemize} + \item New arrow types \arrowtype{>=<}, \arrowtype{>=<<}, \arrowtype{>>=<} + and \arrowtype{<==>}. + \item Internal changes to \cs{ch} allow usage of optional arguments of + \cs*{\textbackslash} and \cs*{label} in \chemmacros' \env*{reactions} + environment. +\end{itemize} + +\subsection{Version 4.6} +\begin{itemize} + \item New options \option{circled} and \option{circletype}. this allows to + set the behaviour as described on \chemmacros' manual for a specific usage + of \cs{ch}. +\end{itemize} + +\subsection{Version 4.7} +\begin{itemize} + \item Dependency change: \chemformula{} now requires the \TikZ{} library + \code{arrows.meta} instead of the library \code{arrows}. This requires + \TikZ{} version~3.0.0. +\end{itemize} + +\subsection{Version 4.8} +\begin{itemize} + \item The \chemformula{} package now is no longer part of the \chemmacros{} + bundle but is dirtributed as a package of it's own. +\end{itemize} + +\section{Licence and Requirements} +\license + +The \chemformula{} package needs and thus loads the packages +\bnd{l3kernel}~\cite{bnd:l3kernel}, \pkg{xparse}, \pkg{l3keys2e} and +\pkg{xfrac} (all three are part of the \bnd{l3packages} +bundle~\cite{bnd:l3packages}), +\pkg{tikz}\footnote{\CTANurl[graphics]{pgf}}~\cite{pkg:pgf}, +\pkg{amsmath}~\cite{pkg:amsmath}, \pkg{nicefrac}~\cite{pkg:nicefrac} and +\pkg{scrlfile} (from the \KOMAScript\footnote{\CTANurl{koma-script}} +bundle~\cite{bnd:koma-script}). + +\section{Setup} +All of \chemformula's options belong to \chemmacros' module +\module{chemformula}. This means if you load it via \chemmacros{} or in +addition to \chemmacros{} they can be setup with +\begin{commands} + \command{chemsetup}[\Oarg{chemformula}\marg{options}] + Set up options for \chemformula{} exclusively, or + \command{chemsetup}[\Marg{chemformula/\meta{option1},chemformula/\meta{option2}}] + Set up options for \chemformula{} together with others of \chemmacros' + options. +\end{commands} +However, if you're using \chemformula{} as a standalone package the command +\cs{chemsetup} is not available. This is why \chemformula{} also has its own +setup command: +\begin{commands} + \command{setchemformula}[\marg{options}] + Set up \chemformula{} when using it independently from \chemmacros. +\end{commands} + +\section{The Basic Principle} +\chemformula{} offers one main command. +\begin{commands} + \command{ch}[\oarg{options}\marg{input}] + \chemformula's main command. +\end{commands} +The usage will seem very familiar to you if you're familiar with \pkg{mhchem}: +\begin{example}[side-by-side] + \ch{H2O} \par + \ch{Sb2O3} \par + \ch{H+} \par + \ch{CrO4^2-} \par + \ch{AgCl2-} \par + \ch{[AgCl2]-} \par + \ch{Y^{99}+} \par + \ch{Y^{99+}} \par + \ch{H2_{(aq)}} \par + \ch{NO3-} \par + \ch{(NH4)2S} \par + \ch{^{227}_{90}Th+} \par + $V_{\ch{H2O}}$ \par + \ch{Ce^{IV}} \par + \ch{KCr(SO4)2 * 12 H2O} +\end{example} + +However, there are differences. The most notable one: \chemformula\ +distinguishes between different types of input. These different parts +\emph{have} to be separated with blanks: +\begin{commands} + \command{ch}[\Marg{part1 part2 part3 part4}] +\end{commands} +A blank in the input \emph{never} is a blank in the output. This role of the +blank strictly holds and disregarding it can have unexpected results and even +lead to errors. + +Another notable difference: \chemformula{} tries to avoid math mode whenever +possible: +\begin{example}[side-by-side] + \ch{A + B ->[a] C} \par + \ce{A + B ->[a] C} +\end{example} + +This means that \cs{ch}\Marg{2H2O} is recognized as a \emph{single} part, +which in this case is recognized as a compound. +\begin{example}[side-by-side] + \ch{2H2O} \par + \ch{2 H2O} +\end{example} +This also means, that a part cannot contain a blank since this will +automatically divide it into two parts. If you need an extra blank in the +output you need to use \verbcode+~+. However, since commands in most cases +gobble a space after them a input like \cs{ch}\Marg{\cs*{command} ABC} will be +treated as a single part. If you want or need to divide them you need to add +an empty group: \cs{ch}\Marg{\cs*{command}\marg{} ABC}. The different input +types are described in the following sections. + +% TODO: Module überdenken, Beschreibung anpassen +There are some options to customize the output of the \cs{ch} command. They +can either be applied locally using the optional argument or can be set +globally using the setup command. All options of \chemformula{} belong to the +module \module{chemformula} and can be set in different ways: +\begin{commands} + \command{chemsetup}[\Oarg{chemformula}\marg{options}] + when loaded via \chemmacros + \command{chemsetup}[\Marg{chemformula/\meta{options}}] + when loaded via \chemmacros + \command{setchemformula}[\marg{options}] + independent from \chemmacros +\end{commands} + +\section{Stoichiometric Factors} +A stoichiometric factor may only contain of numbers and the signs +\verbcode+.,_/()+ +\begin{example}[side-by-side] + \ch{2} \par + \ch{12} + + % decimals: + \ch{.5} \par + \ch{5,75} + + % fractions: + \ch{3/2} \par + \ch{1_1/2} + + % ``iupac'': + \ch{(1/2)} +\end{example} + +As you can see if you input decimal numbers a missing leading zero is added. + +You have to be a little bit careful with the right syntax but I believe it is +rather intuitive. +\begin{sourcecode} + this won't work but will result in an error: \ch{1/1_1} +\end{sourcecode} + +If stoichiometric factors are enclosed with parentheses the fractions are not +recognized and missing leading zeros are not added. What's inside the +parentheses is typeset as is. +\begin{example} + \ch{(1/2) H2O} \ch{1/2 H2O} \ch{0.5 H2O} +\end{example} +You can find many examples like the following for stoichiometric factors in +parentheses in the \acs{iupac} Green Book~\cite{iupac:greenbook}: +\begin{reaction*} + (1/5) K "\ox*{7,Mn}" O4 + (8/5) HCl == (1/5) "\ox*{2,Mn}" Cl2 + (1/2) Cl2 + (1/5) KCl + (4/5) H2O +\end{reaction*} + +There are a few possibilities to customize the output. +\begin{options} + \keyval{decimal-marker}{marker}\Default{.} + The symbol to indicate the decimal. + \keychoice{frac-style}{math,xfrac,nicefrac}\Default{math} + Determines how fractions are displayed. + \keyval{frac-math-cmd}{command sequence}\Default{\cs*{frac}} + \sinceversion{4.1}Allows you to choose which command is used with + \keyis{frac-style}{math}. This needs to be a command sequence that takes + two arguments that are set in math mode. + \keyval{stoich-space}{skip}\Default{.1667em plus .0333em minus .0117em} + The space that is placed after the stoichiometric factor. A rubber + length. + \keybool{stoich-paren-parse}\Default{false} + If set to true stoichiometric factors enclosed by parentheses also are + parsed. + \keyval{stoich-print}{cs}\Default{\cs{chstoich}} + This option allows to redefine the macro that prints the stoichiometric + factors. \meta{cs} should be a macro that takes one mandatory argument. + \emph{Please note that using this option will disable \chemformula's + stoichiometric parsing as that is done by the default command + \cs{chstoich}.} +\end{options} + +\begin{example} + \ch[decimal-marker={,}]{3.5} \ch[decimal-marker={$\cdot$}]{3,5} +\end{example} + +The option \keyis{frac-style}{xfrac} uses the \verbcode+\sfrac+ command of the +\pkg{xfrac} package. The output strongly depends on the font you use. +\begin{example} + \ch[frac-style=xfrac]{3/2} \ch[frac-style=xfrac]{1_1/2} +\end{example} +\chemformula{} defines the instance \verbcode=formula-text-frac= which you can +redefine to your needs. See the \pkg{xfrac} documentation for further +information. The default definition is this: +\begin{sourcecode} + \DeclareInstance{xfrac}{chemformula-text-frac}{text} + { + slash-left-kern = -.15em , + slash-right-kern = -.15em + } +\end{sourcecode} +This document uses the font Linux Libertine~O and the following definition: +\begin{sourcecode} + \DeclareInstance{xfrac}{chemformula-text-frac}{text} + { + scale-factor = 1 , + denominator-bot-sep = -.2ex , + denominator-format = \scriptsize #1 , + numerator-top-sep = -.2ex , + numerator-format = \scriptsize #1 , + slash-right-kern = .05em , + slash-left-kern = .05em + } +\end{sourcecode} + +The option \keyis{frac-style}{nicefrac} uses the \verbcode+\nicefrac+ command +of the \pkg{nicefrac} package. +\begin{example} + \ch[frac-style=nicefrac]{3/2} \ch[frac-style=nicefrac]{1_1/2} +\end{example} + +The option \option{stoich-space} allows you to customize the space between +stoichiometric factor and the group following after it. +\begin{example}[side-by-side] + \ch{2 H2O} \par + \ch[stoich-space=.3em]{2 H2O} +\end{example} + +\section{Compounds}\label{ssec:compounds} +\chemformula{} determines compounds as the type that ``doesn't fit in anywhere +else.'' This point will become more clear when you know what the other types +are. +\begin{example}[side-by-side] + \ch{H2SO4} \par + \ch{[Cu(NH3)4]^2+} +\end{example} + +\subsection{Adducts} +\chemformula{} has two identifiers which will create adducts. +\begin{commands} + \command{ch}[\Marg{A.B}] \ch{A.B} + \command{ch}[\Marg{A*B}] \ch{A*B} +\end{commands} +\begin{example}[side-by-side] + \ch{CaSO4.H2O} \par + \ch{CaSO4*H2O} +\end{example} +Since numbers in a compound always are treated as subscripts (see +section~\ref{ssec:subscripts}) you sometimes need to introduce stoichiometric +factors for the right output: +\begin{example}[side-by-side] + \ch{Na3PO4*12H2O} \par + \ch{Na3PO4* 12 H2O} \par + \ch{Na3PO4 * 12 H2O} +\end{example} + +\subsection{Subscripts}\label{ssec:subscripts} +\emph{All} numbers in a compound are treated as subscripts. +\begin{example}[side-by-side] + \ch{H2SO4} +\end{example} +If you want a letter to be a subscript you can use the math syntax: +\begin{example}[side-by-side] + \ch{A_nB_m} +\end{example} +The subscript recognizes groups. You can also use math inside it. +\begin{example}[side-by-side] + \ch{A_{$n$}B_{$m$}} \par + \ch{NaCl_{(aq)}} +\end{example} + +\subsection{Commands} +Commands are allowed in a compound: +\begin{example}[side-by-side] + \ch{\textbf{A2}B3} \ch{A2\color{red}B3} +\end{example} + +However, if the commands demand numbers as argument, \eg, space commands or +\chemmacros' \verbcode+\ox+ command the direct use will fail. This is +because the numbers are treated as subscripts \emph{before} the command +expands. +\begin{sourcecode} + \ch{A\hspace{2mm}B} will raise an error because \hspace sees something like + this: \hspace{$_2$mm}. Actually not at all like it but equally bad\ldots +\end{sourcecode} +See section~\ref{ssec:text} for a way around this. + +\subsection{Charges and Other Superscripts} +\paragraph{Basics} +If a compound \emph{ends} with a plus or minus sign it will be treated as +charge sign and typeset as superscript. In other places a plus is treated as +a triple bond and a dash will be used as a single bond, see +section~\ref{ssec:bonds}. +\begin{example}[side-by-side] + \ch{A+B} \ch{AB+} \par + \ch{A-B} \ch{AB-} +\end{example} + +For longer charge groups or other superscripts you can use the math syntax. +It recognizes groups and you can use math inside them. Inside these groups +neither \code{+} nor \code{-} are treated as bonds. If a dot \code{.} is +inside a superscript it is treated as indicator for a radical. A \code{*} +gives the excited state. +\begin{example}[side-by-side] + \ch{A^{x-}} \par + \ch{A^x-} \par + \ch{A^{x}-} \par + \ch{A^{$x-$}} \par + \ch{RNO2^{-.}} \par + \ch{^31H} \par + \ch{^{14}6C} \par + \ch{^{58}_{26}Fe} \par + \ch{NO^*} +\end{example} + +Actually\changedversion{4.5a} a dot \code{.} is not always treated as +indicator for a radical: if the dot in the superscript is followed by a number +it is interpreted as a decimal sign. It is typeset according to the option +\option{decimal-marker}. This may be a good place to mention that a comma +\code{,} in a superscript is also typeset according to +\option{decimal-marker}. + +\begin{example}[side-by-side] + \ch{^{22,98}_{11}Na} + \ch{^{22.98}_{11}Na}\par + \setchemformula{decimal-marker={,}} + \ch{^{22,98}_{11}Na} + \ch{^{22.98}_{11}Na} +\end{example} + +Ions and ion composites with more than one charge can be typeset quite as +easy: +\begin{example}[side-by-side] + \ch{SO4^2-} \ch{Ca^2+ SO4^2-} +\end{example} + +\paragraph{Charge Commands} +You don't need to use \cs{mch} and related commands inside \cs{ch}. Indeed, +you \emph{shouldn't} use them as they might mess with the subscript and +superscript alignment. The \chemmacros\ option \code{circled} is obeyed by +\cs{ch}. +\begin{example} + \chemsetup[option]{circled=all} + \ch{H+ + OH- <=> H2O} +\end{example} + +\chemformula{} knows the options \option{circled} and \option{circletype} also +on its own: + +There are coupled with \chemmacros{} options, \ie, setting \chemmacros' +options will also set \chemformula's equivalents. The other way around the +options act independently: setting \chemformula's options will \emph{not} set +\chemmacros' options. +\begin{options} + \keychoice{circled}{formal,\default{all},none}\Default{formal} + \chemformula{} uses two different kinds of charges which indicate the usage + of real ($+/-$) and formal (\fplus/\fminus) charges. The choice + \code{formal} distinguishes between them, choice \code{none} displays them + all without circle, choice \code{all} circles all. + % circletype + \keychoice{circletype}{\default{chem},math}\Default{chem} + This option switches between two kinds of circled charge symbols: + \cs{fplus} \fplus\ and \verbcode+$\oplus$+ $\oplus$. +\end{options} + +\paragraph{Behaviour} +The supercripts behave differently depending on their position in a compound, +if there are super- and subscripts following each other directly. +\begin{example} + \ch{^33B} \ch{{}^33B} \ch{3^3B} \ch{B^3} \ch{B3^3} \par + \ch{^{23}_{123}B} \ch{{}^{23}_{123}B} \ch{_{123}^{23}B} + \ch{B^{23}} \ch{B_{123}^{23}} \par + \ch{^{123}_{23}B} \ch{{}^{123}_{23}B} \ch{_{23}^{123}B} + \ch{B^{123}} \ch{B23^{123}} +\end{example} +\begin{itemize} + \item If a compound \emph{starts} with a sub- or superscript both sub- and + superscript are aligned to the \emph{right} else to the \emph{left}. + \item If a compound \emph{does not start} with a sub- or superscript and + there is both a sub- and a superscript, the superscript is shifted + additionally by a length determined from the option + \key{charge-hshift}{dim}, also see page~\pageref{desc:charge-hshift}f. +\end{itemize} +The second point follows \ac{iupac}'s recommendations: +\begin{cnltxquote}[{\acs{iupac} Green Book {\cite[][p.\,51]{iupac:greenbook}}}] + In writing the formula for a complex ion, spacing for charge number can be + added (staggered arrangement), as well as parentheses: + \ch[charge-hshift=full]{SO4^2-}, \ch{(SO4)^2-}. The staggered arrangement + is now recommended. +\end{cnltxquote} + +\subsection{Bonds}\label{ssec:bonds} +\subsubsection{Native Bonds} +There are three kinds of what I will call ``native bonds'': +\begin{example}[side-by-side] + single: \ch{CH3-CH3} \par + double: \ch{CH2=CH2} \par + triple: \ch{CH+CH} +\end{example} + +\subsubsection{Flexible Bonds} +\paragraph{Predefined Bonds} +In addition to the three native bonds there are a few more which can be called +by +\begin{commands} + \command{bond}[\marg{bond name}] + Prints the bond type specified by \meta{bond name}. +\end{commands} +The predefined bond types are shown in table~\vref{tab:bond_types}. + +\begin{table} + \centering + \caption{Bonds available with \cs*{bond}.} + \label{tab:bond_types} + \begin{tabular}{lcl} + \toprule + \bfseries name & \bfseries appearance & \bfseries aliases \\ + \midrule + \code{single} & \bond{single} & \code{normal}, \code{sb} \\ + \code{double} & \bond{double} & \code{db} \\ + \code{triple} & \bond{triple} & \code{tp} \\ + \code{dotted} & \bond{dotted} & \code{semisingle} \\ + \code{deloc} & \bond{deloc} & \code{semidouble} \\ + \code{tdeloc} & \bond{tdeloc} & \code{semitriple} \\ + \code{co>} & \bond{co>} & \code{coordright} \\ + \code{<co} & \bond{<co} & \code{coordleft} \\ + \bottomrule + \end{tabular} +\end{table} + +\begin{example} + \ch{C\bond{sb}C\bond{db}C\bond{tp}C\bond{deloc}C\bond{tdeloc}C\bond{co>}C\bond{<co}C} +\end{example} + +\paragraph{Own Bonds} +\chemformula{} offers commands to define own bond types: +\begin{commands} + \command{NewChemBond}[\marg{name}\marg{code}] + \sinceversion{4.3}Define the new bond type \meta{name}. Issue an error if + a bond \meta{name} already exists. + \command{DeclareChemBond}[\marg{name}\marg{code}] + Define the new bond type \meta{name} or overwrite it if it already + exists. + \command{RenewChemBond}[\marg{name}\marg{code}] + Redefine the existing bond type \meta{name}. Issue an error if a bond + \meta{name} doesn't exist. + \command{NewChemBondAlias}[\marg{new name}\marg{old name}] + \sinceversion{4.3}Declare the bond type \meta{new name} to be an alias of + \meta{old name}. Issue an error if a bond \meta{new name} already + exists. + \command{DeclareChemBondAlias}[\marg{new name}\marg{old name}] + Declare the bond type \meta{new name} to be an alias of \meta{old name}. + \command{ShowChemBond}[\marg{name}] + Print the definition of bond type \meta{name}. +\end{commands} +The usage is best described with an example. So let's see how the +\code{single} bond and the \code{co>} bond are defined: +\begin{sourcecode} + \NewChemBond{single} + { \draw[chembond] (chemformula-bond-start) -- (chemformula-bond-end) ; } + \NewChemBond{coordright} + { + \draw[chembond,butt cap->] + (chemformula-bond-start) -- (chemformula-bond-end) ; + } + \NewChemBondAlias{co>}{coordright} +\end{sourcecode} +Two points are important: the names of the starting and the ending +coordinates, \code{chemformula-bond-start} and \code{chemformula-bond-end}, +and the \TikZ\ style of the bonds \code{chembond}. + +So, let's say you want to define a special kind of dashed bond. You could do +this: +\begin{example} + \usetikzlibrary{decorations.pathreplacing} + \makeatletter + \NewChemBond{dashed} + { + \draw[ + chembond, + decorate, + decoration={ + ticks, + segment length=\chemformula@bondlength/10,amplitude=1.5pt + }] + (chemformula-bond-start) -- (chemformula-bond-end) ; + } + \makeatother + \chemsetup[chemformula]{bond-length=2ex} + \ch{C\bond{dashed}C} +\end{example} + +The last example showed you another macro: \verbcode+\chemformula@bondlength+. +It only exists so you can use it to access the bond length as set with +\option{bond-length} directly. + +\subsection{Customization}\label{ssec:compounds:customization} +These options allow you to customize the ouptut of the compounds: +\begin{options} + \keyval{subscript-vshift}{dim}\Default{0pt} + Extra vertical shift of the subscripts. + \keychoice{subscript-style}{text,math}\Default{text} + Style that is used to typeset the subscripts. + \keyval{charge-hshift}{dim}\Default{.25em} + Shift of superscripts when following a subscript.\label{desc:charge-hshift} + \keyval{charge-vshift}{dim}\Default{0pt} + Extra vertical shift of the superscripts. + \keychoice{charge-style}{text,math}\Default{text} + Style that is used to typeset the superscripts. + \keychoice{circled}{formal,\default{all},none}\Default{formal} + \sinceversion{4.6}Like \chemmacros' package option but local to + \chemformula's \cs{ch}. That is: since \chemmacros' macros use + \chemformula's mechanism this is effectively an alias. + \keychoice{circletype}{\default{chem},math}\Default{chem} + \sinceversion{4.6}Like \chemmacros' package option but local to + \chemformula's \cs{ch}. That is: since \chemmacros' macros use + \chemformula's mechanism this is effectively an alias. + \keyval{adduct-space}{dim}\Default{.1333em} + Space to the left and the right of the adduct point. + \keyval{bond-length}{dim}\Default{.5833em} + The length of the bonds. + \keyval{bond-offset}{dim}\Default{.07em} + Space between bond and atoms. + \keyval{bond-style}{\TikZ}\Default + \TikZ\ options for the bonds. + \keyval{bond-penalty}{num}\Default{10000} + \sinceversion{4.0a}The penalty that is inserted after a bond for + (dis-)allowing line breaks. + \keyval{radical-style}{\TikZ}\Default + \TikZ\ options for the radical point. + \keyval{radical-radius}{dim}\Default{.2ex} + The radius of the radical point. + \keyval{radical-hshift}{dim}\Default{.15em} + Horizontal shift before the radical point is drawn. + \keyval{radical-vshift}{dim}\Default{.5ex} + Vertical shift relative to the current baseline. + \keyval{radical-space}{dim}\Default{.15em} + Horizontal shift after the radical point is drawn. +\end{options} + +Maybe you have noticed that charges of certain ions are shifted to the +right. +\begin{example}[side-by-side] + \ch{SO4^2-} \ch{NH4+} \ch{Na+} +\end{example} +They are shifted if they \emph{follow} a subscript which follows \ac{iupac} +recommendations~\cite[][p.\,51]{iupac:greenbook}. The amount of the shift can +be set with the option \option{charge-hshift}. +\begin{example} + \ch{SO4^2-} \ch{NH4+} \ch{Na+} \par + \chemsetup[chemformula]{charge-hshift=.5ex} + \ch{SO4^2-} \ch{NH4+} \ch{Na+} \par + \chemsetup[chemformula]{charge-hshift=.5pt} + \ch{SO4^2-} \ch{NH4+} \ch{Na+} +\end{example} + +Despite \ac{iupac}'s recommendation \chemformula{} does not make fully staggered +arrangements in the default setting as I find it hard to read in some cases +and ugly in others. Since this is a subjective decision \chemformula{} not only +let's you define the absolute amount of the shift but also provides a +possibility for full staggered arrangements. For this you have to use +\keyis{charge-hshift}{full}. +\begin{example} + \ch[charge-hshift=0pt]{C5H11+} \ch[charge-hshift=0pt]{SO4^2-} \par + \ch{C5H11+} \ch{SO4^2-} \par + \ch[charge-hshift=1ex]{C5H11+} \ch[charge-hshift=1ex]{SO4^2-} \par + \ch[charge-hshift=full]{C5H11+} \ch[charge-hshift=full]{SO4^2-} +\end{example} + +If you don't want the charges to be typeset in text mode you can switch to +math mode: +\begin{example} + \ch{M^x+} \ch{SO4^2-} \par + \chemsetup[chemformula]{charge-style = math} + \ch{M^x+} \ch{SO4^2-} +\end{example} + +The option \option{subscript-vshift} can be used to adjust the vertical shift +of the subscripts: +\begin{example} + \ch{H2SO4} \ch{Na3PO4} \par + \chemsetup[chemformula]{subscript-vshift=.5ex} + \ch{H2SO4} \ch{Na3PO4} \par + \chemsetup[chemformula]{subscript-vshift=-.2ex} + \ch{H2SO4} \ch{Na3PO4} +\end{example} + +You can choose the mode subscripts are typeset in the same way as it is +possible for the charges: +\begin{example} + \ch{A_nB_m} \ch{H2SO4} \par + \chemsetup[chemformula]{subscript-style = math} + \ch{A_nB_m} \ch{H2SO4} +\end{example} + +The option \option{adduct-space} sets the space left and right to the adduct +symbol $\cdot$. +\begin{example} + \ch{Na3PO3*H2O} \par + \chemsetup[chemformula]{adduct-space=.2em} + \ch{Na3PO3*H2O} +\end{example} + +Changing the length of the bonds: +\begin{example} + \chemsetup[chemformula]{bond-length=4mm}% + single: \ch{CH3-CH3} \par + double: \ch{CH2=CH2} \par + triple: \ch{CH+CH} +\end{example} + +You can change the distance between bond and atom, too: +\begin{example} + \ch{H-H + N+N + O=O} \par + \ch[bond-offset=1pt]{H-H + N+N + O=O} +\end{example} + +\subsection{Standalone Formulae} +\chemformula\sinceversion{4.0} offers a command that \emph{only accepts} the +\enquote{compound} input type: +\begin{commands} + \command{chcpd}[\oarg{options}\marg{compound}] + Typeset single compounds. +\end{commands} + +\section{Special Input Types} +There are some \enquote{special type} input groups. + +\subsection{Single Token Groups} +The first kind are groups which consist of only one token, namely of the +following ones: +\begin{commands} + \command{ch}[\Marg{ + } \ch{ + }] + Creates the plus sign between compounds with space around it:\\ + \cs{ch}\Marg{2 Na + Cl2} \ch{2 Na + Cl2} + \command{ch}[\Marg{ - } \ch{ - }] + \sinceversion{4.3a}Creates the minus sign between compounds with space + around it:\\ + \cs{ch}\Marg{M - H} \ch{M - H} + \command{ch}[\Marg{ v } \ch{ v }] + Sign for precipitate: \cs{ch}\Marg{BaSO4 v} \ch{BaSO4 v} + \command{ch}[\Marg{ \textasciicircum\ } \ch{ ^ }] + Sign for escaping gas\footnotemark: \cs{ch}\Marg{H2 \textasciicircum} + \ch{H2 ^} +\end{commands} +\footnotetext{Is this the correct English term? Please correct me if it isn't.} + +The space left and right of the plus and the minus sign can be set with this +option: +\begin{options} + \keyval{plus-space}{skip}\Default{.3em plus .1em minus .1em} + A rubber length. + \keyval{plus-penalty}{num}\Default{700} + \sinceversion{4.0a}The penalty that is inserted after the plus and the + minus sign for (dis-)allowing line breaks. +\end{options} +\begin{example}[side-by-side] + \ch{A + B}\par + \ch[plus-space=4pt]{A + B} +\end{example} + +\subsection{Option Input} +Sometimes you might want to apply an option only to a part of a, say, +reaction. Of course you have the possibility to use \cs{ch} several times. +\begin{example} + \ch{H2O +}\textcolor{red}{\ch{H2SO4}}\ch{-> H3O+ + HSO4-} \par + \ch{H2O +}\ch[subscript-vshift=2pt]{H2SO4}\ch{-> H3O+ + HSO4-} +\end{example} +This, however, interrupts the input in your source and \emph{may} mess with +the spacing. That's why there is an alternative: +\begin{commands} + \command{ch}[\Marg{ @\marg{options} }] + The options specified this way will be valid \emph{only} until the next + compound is set. +\end{commands} +\begin{example} + \ch{H2O +}\textcolor{red}{\ch{H2SO4}}\ch{-> H3O+ + HSO4-} \par + \ch{H2O + @{format=\color{red}} H2SO4 -> H3O+ + HSO4-} \par + or of course:\par + \ch{H2O + \textcolor{red}{H2SO4} -> H3O+ + HSO4-}\par\bigskip + \ch{H2O +}\ch[subscript-vshift=2pt]{H2SO4}\ch{-> H3O+ + HSO4-} \par + \ch{H2O + @{subscript-vshift=2pt} H2SO4 -> H3O+ + HSO4-} +\end{example} + +\section{Escaped Input} +In some cases it may be desirable to prevent \chemformula{} from parsing the +input. This can be done in two ways. + +\subsection{Text}\label{ssec:text} +If you put something between \verbcode+" "+ or \verbcode+' '+ then the input +will be treated as normal text, except that spaces are not allowed and have to +be input with \verbcode+~+. +\begin{commands} + \command{ch}[\Marg{ "\meta{escaped text}" }] + One of two possibilities to \emph{escape} \chemformula's parsing. + \command{ch}[\Marg{ '\meta{escaped text}' }] + The second of two possibilities to \emph{escape} \chemformula's parsing. +\end{commands} +\begin{example} + \ch{"\ox{2,Ca}" O} \par + \ch{"\ldots\," Na + "\ldots\," Cl2 -> "\ldots\," NaCl} \par + \ch{'A~->~B'} +\end{example} +In many cases you won't need to escape the input. But when you get into +trouble when using a command inside \cs{ch} try hiding it. + +\subsection{Math} +If you especially want to input math you just enclose it with \verbcode+$ $+. +This output is different from the escaped text as it is followed by a space. +The reasoning behind this is that I assume math will mostly be used to replace +stoichiometric factors. +\begin{commands} + \command{ch}[\Marg{ \string$\meta{escaped math}\string$ }] + One of two possibilities to \emph{escape} \chemformula's parsing into math + mode. + \command{ch}[\Marg{ \string\(\meta{escaped math}\string\) }] + The second of two possibilities to \emph{escape} \chemformula's parsing + into math mode. +\end{commands} +\begin{example}[side-by-side] + escaped text: \ch{"$x$" H2O} \par + escaped math: \ch{$x$ H2O} \par + also escaped math: \ch{\(x\) H2O} \par + \ch{$2n$ Na + $n$ Cl2 -> $2n$ NaCl} +\end{example} + +The space that is inserted after a math group can be edited: +\begin{options} + \keyval{math-space}{skip}\Default{.1667em plus .0333em minus .0117em} + A rubber length. +\end{options} +\begin{example} + \ch{$2n$ Na + $n$ Cl2 -> $2n$ NaCl} \par + \chemsetup[chemformula]{math-space=.25em} + \ch{$2n$ Na + $n$ Cl2 -> $2n$ NaCl} \par + \ch{$A->B$} +\end{example} + +\section{Arrows}\label{sec:arrows} +\subsection{Arrow types} +Arrows are input in the same intuitive way they are with \pkg{mhchem}. +There are various different types: +\begin{arrows} + \arrow{->}[ \charrow{->}] + standard right arrow + \arrow{<-}[ \charrow{<-}] + standard left arrow + \arrow{-/>}[ \charrow{-/>}] + does not react (right) + \arrow{</-}[ \charrow{</-}] + does not react (left) + \arrow{<->}[ \charrow{<->}] + resonance arrow + \arrow{<>}[ \charrow{<>}] + reaction in both directions + \arrow{==}[ \charrow{==}] + stoichiometric equation + \arrow{<=>}[ \charrow{<=>}] + equilibrium arrow + \arrow{>=<}[ \charrow{>=<}] + reversed equilibrium arrow + \arrow{<=>>}[ \charrow{<=>>}] + unbalanced equilibrium arrow to the right + \arrow{>=<<}[ \charrow{>=<<}] + reversed unbalanced equilibrium arrow to the right + \arrow{<<=>}[ \charrow{<<=>}] + unbalanced equilibrium arrow to the left + \arrow{>>=<}[ \charrow{>>=<}] + reversed unbalanced equilibrium arrow to the left + \arrow{<o>}[ \charrow{<o>}] + isolobal arrow + \arrow{<==>}[ \charrow{<==>}] + I've seen this one used. I'm not sure it actually has a meaning in + chemical equations. If you have some official reference for this arrow + type please feel free to contact me. +\end{arrows} +All these arrows are drawn with \TikZ. +\begin{example} + \ch{H2 + Cl2 -> 2 HCl} \par + \ch{H2O + CO3^2- <=> OH- + HCO3-} \par + \ch{A <- B} \par + \ch{\{[CH2=CH-CH2]- <-> {}[CH2-CH=CH2]- \}} \par + \ch{A <> B} \par + \ch{H+ + OH- <=>> H2O} \par + \ch{2 NO2 <<=> N2O4} +\end{example} + +\subsection{Labels} +The arrows take two optional arguments to label them. +\begin{arrows} + \arrow*{->\oarg{above}\oarg{below}} + Add text above or under an arrow. +\end{arrows} +\begin{example}[side-by-side] + \ch{A ->[a] B} \par + \ch{A ->[a][b] B} \par + \ch{A ->[\SI{100}{\celsius}] B} +\end{example} +The label text can be parsed seperately from the arrow. The recipe is easy: +leave blanks. +\begin{example}[side-by-side] + \ch{A ->[H2O] B} \par + \ch{A ->[ H2O ] B} \par + \ch{A ->[ "\ox{2,Ca}" F2 ] B} \par + \ch{A ->[$\Delta$,~ \[H+ \]] B} +\end{example} +% TODO: correct info about [] + +If you leave the blanks \chemformula{} treats the groups inside the square +brackets as seperated input types. The arrow reads its arguments +\emph{afterwards}. As you can see the arrows \enquote{grow} with the length +of the labels. What stays constant is the part that protrudes the labels. As +you also can see in the last example square brackets inside the arrow +arguments can be produced using \cs*{[} and \cs*{]}. They keep their usual +meaning outside \cs{ch}. These commands were necessary since the usual +grouping (\ie, hiding the brackets inside curly brackets) didn't work due to +the way \cs{ch} read its argument. This is no longer true but meanwhile +\cs*{[} and \cs*{]} are kept for backwards compatibility. +\begin{example} + \ch{A ->[a] B} \par + \ch{A ->[ab] B} \par + \ch{A ->[abc] B} \par + \ch{A ->[abc~abc] B} \par + % needs the `chemfig' package: + \setatomsep{15pt} + \ch{A ->[ "\chemfig{-[:30]-[:-30]OH}" ] B} \par + \ch{A ->[[]] B} vs. \ch{A ->[\[\]] B} +\end{example} + +\subsection{Customization} +These are the options which enable you to customize the arrows: +\begin{options} + \keyval{arrow-offset}{dim}\Default{.75em} + This is the length that an arrow protrudes a label on both sides. This + means an empty arrow's length is two times \code{arrow-offset}. + \keyval{arrow-min-length}{dim}\Default{0pt} + \sinceversion{3.6b}The minimal length an error must have unless two times + \key{arrow-offset} plus the width of the label is larger. + \keyval{arrow-yshift}{dim}\Default{0pt} + Shifts an arrow up (positive value) or down (negative value). + \keyval{arrow-ratio}{<factor>}\Default{.6} + The ratio of the arrow lengths of the unbalanced equilibrium. \code{.4} + would mean that the length of the shorter arrow is $0.4\times$ the length + of the longer arrow. + \keyval{compound-sep}{dim}\Default{.5em} + The space between compounds and the arrows. + \keyval{label-offset}{dim}\Default{2pt} + The space between the labels and the arrows. + \keyval{label-style}{font command}\Default{\cs*{footnotesize}} + The relative font size of the labels. + \keyval{arrow-penalty}{num}\Default{0} + \sinceversion{4.0a}The penalty that is inserted after an arrow for + (dis-)allowing line breaks. + \keyval{arrow-style}{\TikZ}\Default + \sinceversion{4.1a}Additonal \TikZ\ keys for formatting the arrows. +\end{options} + +The following code shows the effect of the different options on the \verbcode+<=>>+ +arrow: +\begin{example} + standard: \ch{A <=>>[x][y] B} \par + longer: \ch[arrow-offset=12pt]{A <=>>[x][y] B} \par + higher: \ch[arrow-yshift=2pt]{A <=>>[x][y] B} \par + more balanced: \ch[arrow-ratio=.8]{A <=>>[x][y] B} \par + labels further away: \ch[label-offset=4pt]{A <=>>[x][y] B} \par + larger distance to compounds: \ch[compound-sep=2ex]{A <=>>[x][y] B} \par + smaller labels: \ch[label-style=\tiny]{A <=>[x][y] B} +\end{example} + +If you want to have different arrow tips\sinceversion{4.7} there is an easy +way to use existing arrow tips (as defined by \TikZ). \chemformula{} uses +three different arrow tips: \code{cf}, \code{left cf} and \code{right cf}. If +you want them to match those of \pkg{chemfig}~\cite{pkg:chemfig} for example +you could do: +\begin{sourcecode} + \pgfkeys{ + cf /.tip = {CF@full} , + left cf /.tip = {CF@half} + } +\end{sourcecode} +\pkg{chemfig} has no equivalent of \code{right cf}. This mechanism relies on +\TikZ{} version~3.0.0 and the new \code{arrows.meta} library. + +\subsection{Modify Arrow Types}\label{sec:arrows_modify} +The arrows are defined with the commands +\begin{commands} + \command{NewChemArrow}[\marg{type}\marg{\TikZ}] + Define the new arrow type \meta{type}. Issue an error if an arrow type + \meta{type} already exists. + \command{DeclareChemArrow}[\marg{type}\marg{\TikZ}] + Define the new arrow type \meta{type} or overwrite it if it already + exists. + \command{RenewChemArrow}[\marg{type}\marg{\TikZ}] + Redefine the arrow type \meta{type}. Issue an error if an arrow type + \meta{type} doesn't exist. + \command{ShowChemArrow}[\marg{type}] + Print out the current definition of the arrow type \meta{type}. +\end{commands} +\meta{type} is the sequence of tokens that is replaced with the actual arrow +code. For example the basic arrow is defined via +\begin{sourcecode} + \NewChemArrow{->}{ + \draw[chemarrow,-cf] (cf_arrow_start) -- (cf_arrow_end) ; + } +\end{sourcecode} +In order to define arrows yourself you need to know the basics of +\TikZ\footnote{Please see the \manual{pgfmanual} for details.}. The +predefined arrows use the arrow tips \code{cf}, \code{left cf} and \code{right + cf}. They also all except the net reaction arrow \code{==} use the +\TikZ-style \code{chemarrow} that you should use, too, if you want the option +\option{arrow-style} to have an effect. + +There are some predefined coordinates you can and should use. For +completeness' sake the arrow tips and the \TikZ-style are also listed: +\begin{codedesc} + \Code{(cf\_arrow\_start)} + The beginning of the arrow. + \Code{(cf\_arrow\_end)} + The end of the arrow. + \Code{(cf\_arrow\_mid)} + The mid of the arrow. + \Code{(cf\_arrow\_mid\_start)} + The beginning of the shorter arrow in types like \verbcode+<=>>+. + \Code{(cf\_arrow\_mid\_end)} + The end of the shorter arrow in types like \verbcode+<=>>+. + \Code{cf} + A double-sided arrow tip. + \Code{left cf} + A left-sided arrow tip. + \Code{right cf} + A right-sided arrow tip. + \Code{chemarrow} + \chemformula's \TikZ-style that is applied to the arrows and set with + \option{arrow-style} +\end{codedesc} +\begin{example} + \NewChemArrow{.>}{ + \draw[chemarrow,-cf,dotted,red] (cf_arrow_start) -- (cf_arrow_end); + } + \NewChemArrow{n>}{ + \draw[chemarrow,-cf] + (cf_arrow_start) + .. controls ([yshift=3ex]cf_arrow_mid) .. + (cf_arrow_end); + } + \ch{A .> B} \ch{A .>[a][b] B} \ch{A n> B} +\end{example} + +\begin{example} + \texttt{\ShowChemArrow{->}} \par + \RenewChemArrow{->}{\draw[chemarrow,->,red] (cf_arrow_start) -- (cf_arrow_end) ;} + \texttt{\ShowChemArrow{->}} \par + \ch{A -> B} +\end{example} + +\subsection{Standalone Arrows} +\chemformula{} offers\sinceversion{4.0} a command that \emph{only accepts} the +\enquote{arrow} input type: +\begin{commands} + \command{charrow}[\marg{type}\oarg{above}\oarg{below}] + Print the arrow type \meta{type}. +\end{commands} +This command is internally used for the arrows, too, when \cs{ch} is parsed. + +\section{Names} +\subsection{Syntax} +\chemformula{} has a built-in syntax to write text under a compound. In a way +it works very similar to the arrows. +\begin{commands} + \command{ch}[\Marg{ !(\meta{text})( \meta{formula} ) }] + Writes \meta{text} below \meta{formula}. +\end{commands} +If an exclamation mark is followed by a pair of parentheses \chemformula{} will +parse it this way: +\begin{example} + \ch{!(ethanol)( CH2CH2OH )} +\end{example} +The same what's true for the arrows arguments holds for these arguments: if +you leave blanks the different parts will be treated according to their input +type before the text is set below the formula. +\begin{example} + \ch{!(water)(H2O)} \quad + \ch{!( "\textcolor{blue}{water}" )( H2O )} \quad + \ch{!( $2n-1$ )( H2O )} \quad + \ch{!( H2O )( H2O )} \quad + \ch{!(oxonium)( H3O+ )} +\end{example} +If for some reason you want to insert an exclamation mark \emph{without} it +creating a name you only have to make sure it isn't followed by parentheses. +\begin{example}[side-by-side] + \ch{H2O~(!)} \par + \ch{A!{}()} +\end{example} + +\subsection{Customization} +\chemformula{} provides two options to customize the output of the names: +\begin{options} + \keyval{name-format}{commands}\Default{\cs*{scriptsize}\cs*{centering}} + The format of the name. This can be arbitrary input. + \keychoice{name-width}{\meta{dim},auto}\Default{auto} + The width of the box where the label is put into. \code{auto} will detect + the width of the name and set the box to this width. +\end{options} +\begin{example} + \ch{!(acid)( H2SO4 ) -> B} \par + \ch[name-format=\sffamily\small]{!(acid)( H2SO4 ) -> B} \par + \ch[name-format=\scriptsize N:~]{!(acid)( H2SO4 ) -> B} \par + \ch[name-width=3em,name-format=\scriptsize\raggedright]{!(acid)( H2SO4 ) -> B} +\end{example} + +\subsection{Standalone Names} +\chemformula{} offers a command\sinceversion{4.0} that allows the usage of the +\enquote{name} syntax in normal text. This is the command that a bang is +replaced with in \chemformula's formulas, actually. Both arguments are +mandatory. +\begin{commands} + \command{chname}[\darg{text~1}\darg{text~2}] + The command that is useed internally for placing \meta{text~1} below of + \meta{text~2}. +\end{commands} + +\section{Format and Font}\label{sec:format} +In the standard setting \chemformula{} doesn't make any default changes to the +font of the formula output. Let's take a look at a nonsense input which shows +all features: +\begin{example}[pre-output={\biolinumLF\libertineLF\chemsetup{chemformula/format=}}] + \newcommand*\sample{% + \ch{H2C-C+C-CH=CH+ + CrO4^2- + <=>[x][y] + 2.5 Cl^{-.} + 3_1/2 Na*OH_{(aq)} + !(name)( A^n ) "\LaTeXe"} + } + \sample +\end{example} +\newcommand*\sample{% + \ch{H2C-C+C-CH=CH+ + CrO4^2- + <=>[x][y] + 2.5 Cl^{-.} + 3_1/2 Na*OH_{(aq)} + !(name)( A^n ) "\LaTeXe"} +} + +Now we're going to change different aspects of the font a look what happens: +\begin{example}[pre-output={\biolinumLF\libertineLF\chemsetup{chemformula/format=}}] + \sffamily Hallo \sample \\ + \ttfamily Hallo \sample \normalfont \\ + \bfseries Hallo \sample \normalfont \\ + \itshape Hallo \sample +\end{example} +As you can see most features adapt to the surrounding font. + +If you want to change the default format you need to use this option: +\begin{options} + \keyval{format}{anything}\Default + Adds arbitrary code before the output of \cs{ch}. +\end{options} +\begin{example}[pre-output={\biolinumLF\libertineLF\chemsetup{chemformula/format=}}] + \definecolor{newblue}{rgb}{.1,.1,.5} + \chemsetup[chemformula]{format=\color{newblue}\sffamily} + \sffamily Hallo \sample \\ + \ttfamily Hallo \sample \normalfont \\ + \bfseries Hallo \sample \normalfont \\ + \itshape Hallo \sample +\end{example} + +You can also specifically change the fontfamily, fontseries and fontshape of +the output. +\begin{options} + \keyval{font-family}{family}\Default + Changes the fontfamily of the output with \cs*{fontfamily}\marg{family}. + \keyval{font-series}{series}\Default + Changes the fontseries of the output with \cs*{fontseries}\marg{series}. + \keyval{font-shape}{shape}\Default + Changes the fontshape of the output with \cs*{fontshape}\marg{shape}. +\end{options} +\begin{example}[pre-output={\biolinumLF\libertineLF\chemsetup{chemformula/format=}}] + \chemsetup[chemformula]{font-series=bx} + Hallo \sample \par + \sffamily Hallo \sample \normalfont \par + \chemsetup[chemformula]{font-family=lmss,font-series=m} Hallo \sample + \normalfont \par + \itshape Hallo \sample +\end{example} + +If you're using \XeLaTeX\ or \LuaLaTeX\ and have loaded \pkg{fontspec} you +have the possibilty to set the font with it: +\begin{options} + \keyval{font-spec}{font}\Default + Use font \meta{font} for \chemformula's formulas. +\end{options} +or with options +\begin{options} + \keychoice{font-spec}{\Marg{[\meta{options}]\meta{font}}} + Use font \meta{font} with options \meta{options} for \chemformula's + formulas. +\end{options} +Since this document is typeset with \pdfLaTeX\ the option cannot be +demonstrated here. + +\section{Usage In Math Equations} +The \cs{ch} command can be used inside math equations. It recognizes +\verbcode+\\+ and \verbcode+&+ and passes them on. However, you can't use the +optional arguments of \verbcode+\\+ inside \cs{ch}. +\begin{example} + \begin{align} + \ch{ + H2O & ->[a] H2SO4 \\ + Cl2 & ->[x][y] CH4 + } + \end{align} + \begin{align*} + \ch{ + RNO2 &<=>[ + e- ] RNO2^{-.} \\ + RNO2^{-.} &<=>[ + e- ] RNO2^2- + } + \end{align*} +\end{example} + +\section{Usage with \TikZ{} or \pkg*{pgfplots} and externalization} +Since \chemformula{} uses\sinceversion{4.1} \TikZ{} to draw reaction arrows +and bonds they would be externalized, too, if you use that facility with +\TikZ{} or \needpackage{pgfplots}~\cite{pkg:pgfplots}. This may not be +desirable since they are very small pictures maybe containing of a single +line. This is why \chemformula's default behaviour is to disable +externalization for it's bonds and arrows. This can be turned on and off +through the following option: +\begin{options} + \keybool{tikz-external-disable}\Default{true} + dis- or enable \TikZ' externalization mechanism for \chemformula's arrows + and bonds. +\end{options} + +If you should be using a formula that contains bonds or arrows inside of a +\code{tikzpicture} that is externalized you should locally enable it for +\chemformula, too: + +\begin{sourcecode} + \begin{tikzpicture} + \setchemformula{tikz-external-disable=false} + \begin{axis}[xlabel={\ch{2 H+ + 2 e- -> H2}}] + \addplot ... ; + \end{axis} + \end{tikzpicture} +\end{sourcecode} + +\section{Lewis Formulae}\label{sec:lewis-formulae} +\chemformula{} offers\sinceversion{4.2} a command to typeset Lewis formulae. +This does not mean Lewis structures! Those can be achieved using the +\pkg{chemfig} package~\cite{pkg:chemfig}. \chemformula{} provides the +possibility to draw electrons as dots and pairs of dots or a line around an +atom. + +\begin{commands} + \command{chlewis}[\oarg{options}\marg{electron spec}\marg{atom}] + Draws electrons around the \meta{atom} according to \meta{electron spec}. +\end{commands} + +Electrons are specified by the angle to the horizontal in the couter-clockwise +direction. The default appearance is a pair of electrons drawn as a pair of +dots. Other specifications can be chosen. The specification follows the +pattern \meta{angle}\meta{separator}. \meta{angle} is a positiv or negativ +integer denoting the angle counter clockwise to the horizontal where the +electrons should be drawn. \meta{separator} is either a dot (\code{.}, single +electron), a colon (\code{:}, electron pair), a vertical line (\code{|}, +electron pair), an o (\code{o}, empty pair), or a comma (\code{,} default +spec). + +\begin{commands} + \command{chlewis}[\Marg{\meta{angle1}\meta{type1}\meta{angle2}\meta{type2}}% + \marg{atom}] + For example: \cs{chlewis}\Marg{0,180}\Marg{O} gives \chlewis{0,180}{O} and + \cs{chlewis}\Marg{0.90.180.270.}\Marg{C} gives + \chlewis{0.90.180.270.}{C}. +\end{commands} + +The appearance can be influenced by a number of options: +\begin{options} + \keychoice{lewis-default}{.,:,|,o,single,pair,pair (dotted),pair + (line),empty}\Default{pair} + Sets the default type that is used when no type is given in \meta{electron + spec}. + \keyval{lewis-distance}{dim}\Default{1ex} + The distance of two electrons in a pair. + \keyval{lewis-line-length}{dim}\Default{1.5ex} + The length of the line representing an electron pair. + \keyval{lewis-line-width}{dim}\Default{1pt} + The thickness of a line representing an electron pair. + \keyval{lewis-offset}{dim}\Default{.5ex} + The distance of the symbols from the atom. +\end{options} +The dots are drawn according to the \option{radical-radius} option mentioned +in section~\ref{ssec:compounds:customization}. + +The basic usage should be more or less self-explaining: +\begin{example}[side-by-side] + \chlewis{0:90|180.270}{O} + \quad + \chlewis{45,135}{O} + \quad + \chlewis{0o}{Na} +\end{example} + +The next example shows the effect of some of the options: +\begin{example} + \chlewis[lewis-default=.]{23,68,113,158,203,248,293,338}{X} + \quad + \chlewis{0,90,180,270}{X} + \quad + \chlewis[lewis-distance=1.25ex]{0,90,180,270}{X} + \quad + \chlewis[lewis-distance=.75ex,radical-radius=.5pt]{0,90,180,270}{X} + \quad + \chlewis[ + radical-radius=.5pt, + lewis-default=. + ]{23,68,113,158,203,248,293,338}{X} +\end{example} + +\begin{example} + \ch{ + !($1s^22s^1$)( "\chlewis{180.}{Li}" ) + + !($1s^22s^22p^5$)( "\chlewis{0.90,180,270}{F}" ) + -> + !($1s^2$)( Li+ ) + !($1s^22s^22p^6$)( "\chlewis{0,90,180,270}{F}" {}- ) + } +\end{example} + +\section{Kröger-Vink Notation}\label{sec:kroger-vink-notation} + +\chemformula{} also supports the Kröger-Vink notation\sinceversion{4.5}. +\begin{options} + \keybool{kroeger-vink}\Default{false} + Enable the Kröger-Vink notation. As most options this can be enabled + globally via the setup command or locally as option to \cs{ch}. +\end{options} + +With this option enabled several changes come into effect: \code{'} prodoces a +prime, a \code{x} in a superscript produces $\times$, and both a \code{.} and +a \code{*} produce a little filled circle. In the Kröger-Vink notation a prime +denotes a negative relative charge, the circle a positive relative charge, and +the cross denotes a neutral relative charge. + +\begin{example}[side-by-side,add-sourcecode-options={literate=}] + \setchemformula{kroeger-vink=true} + \ch{Al_{Al}^'} + \ch{Al_{Al}'}\par + \ch{Ni_{Cu}^{x}}\par + \ch{V_{Cl}^.} + \ch{V_{Cl}^*}\par + \ch{Ca_i^{..}}\par + \ch{e^'}\par + \ch{Cl_i^'} + \ch{Cl_i'}\par + \ch{O_i^{''}} + \ch{O_i''} +\end{example} + +There are a number of options for customizations: +\begin{options} + \keyval{kv-positive-style}{\TikZ}\Default + \TikZ\ code for positive charge dot. + \keyval{kv-positive-radius}{dim}\Default{.3ex} + Radius of positive charge dot + \keyval{kv-positive-hshift}{dim}\Default{.15em} + Horizontal shift of positive charge dot + \keyval{kv-positive-vshift}{dim}\Default{.5ex} + Vertical shift positive charge dot + \keyval{kv-positive-offset}{dim}\Default{.4em} + The offset of two consecutive positive charge dots + \keyval{kv-neutral-symbol}{\TeX\ code}\Default{\$\cs*{times}\$} + Symbol for neutral particles. +\end{options} + +\end{document} + +\section{Further Examples} +This section presents some examples of a possible usage. + +\begin{example} + \begin{reaction}[Synthese von Alkanen] + !(Synthesegas)( $n$ CO + $(2n+1)$ H2 ) + ->[\SI{200}{\celsius}][\[CoNi\]] + C_{$n$}H_{$2n+2$} + $n$ H2O + \end{reaction} +\end{example} + +\begin{example} + \begin{reactions*} + "a)" && CH4 + Cl2 &-> CH3Cl + HCl && "{\small Chlormethan/Methylchlorid}" \\ + "b)" && CH3Cl + Cl2 &-> CH2Cl2 + HCl && "{\small Dichlormethan/Methylenchlorid}" \\ + "c)" && CH2Cl2 + Cl2 &-> CHCl3 + HCl && "{\small Trichlormethan/Chloroform}" \\ + "d)" && CHCl3 + Cl2 &-> CCl4 + HCl && "{\small Tetrachlormethan/Tetrachlorkohlenstoff}" + \end{reactions*} +\end{example} + +\begin{example} + \chemsetup[ox]{parse=false} + \ch{ + "\ox{\delm,C}" -{} "\ox{\delp,M}" \qquad + ( <-> "\ox{\delp,C}" -{} "\ox{\delm,Br}" ) + } \\ + \ch[adduct-space=0pt]{X. + .Y <=> X-Y + Bindungsenergie} \\ + \ch[name-format=\normalsize]{ + !(\State{H}{f}\qquad)() !(\textcolor{red}{??})( CH4\gas{} ) + + !(\num{0})( 2 O2\gas{} ) + -> + !(\num{-94.3})( CO2\gas{} ) + + !(\num{-57.9})( H2O\lqd{} ) + + !(\num{-192.1})( "\State{H}" ) + } +\end{example} + +\begin{example} + \newcommand\cstack[1]{% + \clap{% + \begin{tabular}{c} + #1 + \end{tabular} + }% + } + \begin{reactions*} + CH3MgBr + "\ox*{1,Cu}" X & + -> "\glqq" CH3 "\ox*{1,Cu}\grqq" + MgBrX "\qquad X~$=$~Br,I,CN" \\ + 2 MeLi + CuI & + -> !(\cstack{Dimethylcuprat\\(Gilmann-Cuprat)})( Me2CuLi ) + Li + \end{reactions*} +\end{example} + +\begin{example} + % needs `chemfig' + \begin{reactions*} + H3C-CH3 + Cl2 & + ->[$\Delta$][$h\nu$] H3CCH2Cl + HCl & & + "\Enthalpy{-27.1}" \\ + H3C-CH3 + "\Lewis{0.,Cl}" & + -> H3CCH2 "\Lewis{0.,\vphantom{H}}" + HCl & & + "\Enthalpy{-5.0}" \\ + H3C-CH2 "\Lewis{0.,\vphantom{H}}" + Cl2 & + -> H3CCH2Cl + "\Lewis{0.,Cl}" & & + "\Enthalpy{-23.0}" + \end{reactions*} +\end{example} + +The following example shows how the cancelling of compounds could be +done\footnote{Inspired by a question on TeX.SE: + \url{http://tex.stackexchange.com/q/30118/5049}}. +\begin{example} + % needs `cancel' + \begin{align*} + \ch{\cancel{HCOOH\aq} + H2O\lqd{} &<=> H3O^+\aq{} + \cancel{HCOO^-\aq}} \\ + \ch{\cancel{HCOO^-\aq} + H2O\lqd{} &<=> \cancel{HCOOH\aq} + OH^-\aq}\\[-1ex] + \cline{1-2} + \ch{H2O\lqd{} + H2O\lqd{} &<=> H3O^+\aq{} + OH^-\aq} + \end{align*} +\end{example} + +\end{document} diff --git a/Master/texmf-dist/tex/latex/chemformula/chemformula.sty b/Master/texmf-dist/tex/latex/chemformula/chemformula.sty new file mode 100644 index 00000000000..d01d1e79121 --- /dev/null +++ b/Master/texmf-dist/tex/latex/chemformula/chemformula.sty @@ -0,0 +1,3116 @@ +% -------------------------------------------------------------------------- +% the CHEMFORMULA package +% +% typeset chemical compounds and reactions +% +% -------------------------------------------------------------------------- +% Clemens Niederberger +% -------------------------------------------------------------------------- +% https://github.com/cgnieder/chemformula/ +% contact@mychemistry.eu +% -------------------------------------------------------------------------- +% If you have any ideas, questions, suggestions or bugs to report, please +% feel free to contact me. +% -------------------------------------------------------------------------- +% Copyright 2011-2014 Clemens Niederberger +% +% This work may be distributed and/or modified under the +% conditions of the LaTeX Project Public License, either version 1.3 +% of this license or (at your option) any later version. +% The latest version of this license is in +% http://www.latex-project.org/lppl.txt +% and version 1.3 or later is part of all distributions of LaTeX +% version 2005/12/01 or later. +% +% This work has the LPPL maintenance status `maintained'. +% +% The Current Maintainer of this work is Clemens Niederberger. +% -------------------------------------------------------------------------- +\RequirePackage{ expl3 , xparse , l3keys2e , tikz , amsmath , xfrac , nicefrac , scrlfile } +\usetikzlibrary{arrows.meta} +\def\chemformula@version{4.7} +\def\chemformula@date{2014/08/08} + +\ProvidesExplPackage + {chemformula} + {\chemformula@date} + {\chemformula@version} + {typeset chemical compounds and reactions} + +% -------------------------------------------------------------------------- +% check expl3 version: +\@ifpackagelater { expl3 } { 2012/11/21 } + { } + { + \PackageError { chemformula } { Support~package~expl3~too~old } + { + You~need~to~update~your~installation~of~the~bundles~'l3kernel'~and~ + 'l3packages'.\MessageBreak + Loading~chemformula~will~abort! + } + \tex_endinput:D + } + +% -------------------------------------------------------------------------- +% warning and error messages: +\msg_new:nnnn { chemformula } { missing-argument } + { Wrong~name~input~ \msg_line_context: . } + { + Maybe~you've~forgotten~to~add~the~second~argument~to~name~syntax?~ + "!(<name>)(<chemformula>)".\\ + Or~you~have~forgotten~to~add~a~group~between~an~exclamation~mark~and~ + the~following~parenthesis?~"!~{}()"\\ + Either~way~-~I~don't~know~what~to~do~ \msg_line_context: . + } + +\msg_new:nnnn { chemformula } { new-arrow } + { The~arrow~type~ \tl_to_str:n { #1 } \c_space_tl is~already~defined. } + { + You've~tried~to~define~the~arrow~type~\tl_to_str:n { #1 } \c_space_tl with + ~\token_to_str:N \NewChemArrow \c_space_tl but~it~already~exists. + ~Choose~another~name. + } + +\msg_new:nnnn { chemformula } { renew-arrow } + { The~arrow~type~ \tl_to_str:n { #1 } \c_space_tl is~not~defined. } + { + You've~tried~to~renew~the~arrow~type~\tl_to_str:n { #1 } ~but~it~doesn't~ + exist. + } + +\msg_new:nnnn { chemformula } { new-bond } + { The~bond~type~ \tl_to_str:n { #1 } \c_space_tl is~already~defined. } + { + You've~tried~to~define~the~bond~type~\tl_to_str:n { #1 } \c_space_tl with + ~\token_to_str:N \NewChemBond \c_space_tl but~it~already~exists. + ~Choose~another~name. + } + +\msg_new:nnnn { chemformula } { renew-bond } + { The~bond~type~ \tl_to_str:n { #1 } \c_space_tl is~not~defined. } + { + You've~tried~to~renew~the~bond~type~\tl_to_str:n { #1 } ~but~it~doesn't~ + exist. + } + +\msg_new:nnnn { chemformula } { stand-alone } + { + You're~using~`chemformula'~as~a~stand-alone~package~or~have~loaded~it~ + before~you've~loaded~`chemmacros',~too.~Some~features~might~not~be~ + provided!~Espacially~you~cannot~use~\token_to_str:N \chemsetup \c_space_tl + to~setup~your~formulae. + } + { + You're~using~`chemformula'~as~a~stand-alone~package~or~have~loaded~it~ + before~you've~loaded~`chemmacros',~too.~Some~features~might~not~be~ + provided!~Espacially~you~cannot~use~\token_to_str:N \chemsetup \c_space_tl + to~setup~your~formulae. + } + +\msg_new:nnnn { chemformula } { command-deprecated } + { + The~command~\token_to_str:N #1 \c_space_tl is~deprecated.~Use~ + \token_to_str:N #2 \c_space_tl instead. + } + { + The~command~\token_to_str:N #1 \c_space_tl is~deprecated.~Use~ + \token_to_str:N #2 \c_space_tl instead. + } + +\cs_new_protected:Npn \chemformula_define_deprecated:NNn #1#2#3 + { + \cs_new_protected:Npn #1 + { + \msg_warning:nnnn { chemformula } { command-deprecated } + { #1 } { #2 } + #3 + } + } + +\NewDocumentCommand \DeprecatedFormulaCommand { mmm } + { \chemformula_define_deprecated:NNn #1 #2 { #3 } } + +% -------------------------------------------------------------------------- +% variants of kernel functions: +\cs_generate_variant:Nn \keys_set:nn { nV } +\cs_generate_variant:Nn \tl_if_blank:nF { V } +\cs_generate_variant:Nn \tl_if_in:nnT { x , nV } +\cs_generate_variant:Nn \prop_get:Nn { NV } +\cs_generate_variant:Nn \tl_set_rescan:Nnn { NnV } +\cs_generate_variant:Nn \dim_set:Nn { NV } + +% -------------------------------------------------------------------------- +% package options: +\bool_new:N \l__chemformula_strict_bool +\keys_define:nn { chemmacros / chemformula } + { + strict .bool_set:N = \l__chemformula_strict_bool , + strict .default:n = true + } + +\ProcessKeysOptions{ chemmacros / chemformula } + +\AtBeginDocument + { + \@ifpackageloaded{ chemmacros } + { + \bool_if:NT \l_chemmacros_strict_bool + { \bool_set_true:N \l__chemformula_strict_bool } + } + {} + } + +% -------------------------------------------------------------------------- +% VARIABLES +% temporary variables: +\tl_new:N \l__chemformula_tmpa_tl +\tl_new:N \l__chemformula_tmpb_tl +\tl_new:N \l__chemformula_tmpc_tl + +\dim_new:N \l__chemformula_tmpa_dim +\dim_new:N \l__chemformula_tmpb_dim + +\int_new:N \l__chemformula_tmpa_int +\int_new:N \l__chemformula_tmpb_int + +\box_new:N \l__chemformula_tmpa_box +\box_new:N \l__chemformula_tmpb_box + +\seq_new:N \l__chemformula_tmpa_seq + +% booleans: +% this one is officially used to detect wether we're in \ch or not: +\bool_new:N \l_chemformula_inside_ch_bool +% those are private: +\bool_new:N \l__chemformula_formal_charges_bool +\bool_new:N \l__chemformula_formal_chem_bool +\bool_set_true:N \l__chemformula_formal_chem_bool +\bool_new:N \l__chemformula_options_bool +\bool_new:N \l__chemformula_is_option_bool +\bool_new:N \l__chemformula_stoich_bool +\bool_new:N \l__chemformula_no_stoich_bool +\bool_new:N \l__chemformula_is_plus_bool +\bool_new:N \l__chemformula_is_up_bool +\bool_new:N \l__chemformula_is_down_bool +\bool_new:N \l__chemformula_is_arrow_bool +\bool_new:N \l__chemformula_is_name_bool +\bool_new:N \l__chemformula_stoich_is_iupac_bool +\bool_new:N \l__chemformula_stoich_parse_iupac_bool +\bool_new:N \l__chemformula_first_last_text_bool +\bool_new:N \l__chemformula_first_last_double_bool +\bool_new:N \l__chemformula_first_last_single_bool +\bool_new:N \l__chemformula_first_last_math_bool +\bool_new:N \l__chemformula_first_last_dollar_bool +\bool_new:N \l__chemformula_first_last_mathbraces_bool +\bool_new:N \l__chemformula_number_style_math_bool +\bool_new:N \l__chemformula_charge_style_math_bool +\bool_new:N \l__chemformula_sub_bool +\bool_new:N \l__chemformula_sup_bool +\bool_new:N \l__chemformula_is_isotope_bool +\bool_new:N \l__chemformula_xfrac_bool +\bool_new:N \l__chemformula_nicefrac_bool +\bool_new:N \l__chemformula_mathfrac_bool +\bool_set_true:N \l__chemformula_mathfrac_bool +\bool_new:N \l__chemformula_fss_bool +\bool_new:N \l__chemformula_fontspec_bool +\bool_new:N \l__chemformula_fss_family_bool +\bool_new:N \l__chemformula_fss_series_bool +\bool_new:N \l__chemformula_fss_shape_bool +\bool_new:N \l__chemformula_name_width_bool +\bool_new:N \l__chemformula_charge_full_shift_bool +\bool_new:N \l__chemformula_tikzexternaldisable_bool +\bool_set_true:N \l__chemformula_tikzexternaldisable_bool +\bool_new:N \l__chemformula_kroegervink_bool + +% dimensions: +\dim_new:N \l__chemformula_arrow_length_dim +\dim_new:N \l__chemformula_arrow_label_height_dim +\dim_new:N \l__chemformula_arrow_label_offset_dim +\dim_set:Nn \l__chemformula_arrow_label_offset_dim { 2pt } +\dim_new:N \l__chemformula_arrow_minimum_length_dim +\dim_new:N \l__chemformula_arrow_shortage_dim +\dim_new:N \l__chemformula_arrow_offset_dim +\dim_new:N \l__chemformula_arrow_yshift_dim +\dim_set:Nn \l__chemformula_arrow_yshift_dim { 0pt } +\dim_new:N \l__chemformula_radical_radius_dim +\dim_set:Nn \l__chemformula_radical_radius_dim { .2ex } +\dim_new:N \l__chemformula_radical_hshift_dim +\dim_set:Nn \l__chemformula_radical_hshift_dim { .15em } +\dim_new:N \l__chemformula_radical_vshift_dim +\dim_set:Nn \l__chemformula_radical_vshift_dim { .5ex } +\dim_new:N \l__chemformula_radical_space_dim +\dim_set:Nn \l__chemformula_radical_space_dim { .3em } +\dim_new:N \l__chemformula_arrow_head_dim +\dim_new:N \l__chemformula_name_dim +\dim_new:N \l__chemformula_adduct_space_dim +\dim_set:Nn \l__chemformula_adduct_space_dim { .1333em } +\dim_new:N \l__chemformula_charge_shift_dim +\dim_set:Nn \l__chemformula_charge_shift_dim { .5ex } +\dim_new:N \l__chemformula_subscript_shift_dim +\dim_new:N \l__chemformula_superscript_shift_dim +\dim_new:N \l__chemformula_subscript_dim +\dim_zero:N \l__chemformula_subscript_dim +\dim_new:N \l__chemformula_superscript_dim +\dim_zero:N \l__chemformula_superscript_dim +\dim_new:N \l__chemformula_bond_dim +\dim_set:Nn \l__chemformula_bond_dim { .5833em } +\dim_new:N \l__chemformula_bond_space_dim +\dim_set:Nn \l__chemformula_bond_space_dim { .07em } +\dim_new:N \l__chemformula_elspec_pair_distance_dim +\dim_set:Nn \l__chemformula_elspec_pair_distance_dim { 1ex } +\dim_new:N \l__chemformula_elspec_pair_line_length_dim +\dim_set:Nn \l__chemformula_elspec_pair_line_length_dim { 1.5ex } +\dim_new:N \l__chemformula_elspec_pair_width_dim +\dim_set:Nn \l__chemformula_elspec_pair_width_dim { 1pt } +\dim_new:N \l__chemformula_kroegervink_positive_radius_dim +\dim_set:Nn \l__chemformula_kroegervink_positive_radius_dim { .3ex } +\dim_new:N \l__chemformula_kroegervink_positive_hshift_dim +\dim_set:Nn \l__chemformula_kroegervink_positive_hshift_dim { .15em } +\dim_new:N \l__chemformula_kroegervink_positive_vshift_dim +\dim_set:Nn \l__chemformula_kroegervink_positive_vshift_dim { .5ex } +\dim_new:N \l__chemformula_kroegervink_positive_space_dim +\dim_set:Nn \l__chemformula_kroegervink_positive_space_dim { .4em } + +% skips: +\skip_new:N \l__chemformula_stoich_space_skip +\skip_set:Nn \l__chemformula_stoich_space_skip { .1667em plus .0333em minus .0117em } +\skip_new:N \l__chemformula_math_space_skip +\skip_set:Nn \l__chemformula_math_space_skip { .1667em plus .0333em minus .0117em } +\skip_new:N \l__chemformula_plus_space_skip +\skip_set:Nn \l__chemformula_plus_space_skip { .3em plus .1em minus .1em } + + +% integers: +\int_new:N \l__chemformula_count_tokens_int +\int_new:N \g__chemformula_lewis_int + +% token lists: +\tl_new:N \l__chemformula_compound_sep_tl +\tl_set:Nn \l__chemformula_compound_sep_tl { .5em } +\tl_new:N \l__chemformula_arrow_ratio_tl +\tl_set:Nn \l__chemformula_arrow_ratio_tl { .6 } +\tl_new:N \l__chemformula_radical_style_tl +\tl_new:N \l__chemformula_arrow_head_tl +\tl_set:Nn \l__chemformula_arrow_head_tl { cf } +\tl_new:N \l__chemformula_upper_label_tl +\tl_new:N \l__chemformula_lower_label_tl +\tl_new:N \l__chemformula_arrow_style_tl +\tl_new:N \l__chemformula_arrow_label_style_tl +\tl_set:Nn \l__chemformula_arrow_label_style_tl { \footnotesize } +\tl_new:N \l__chemformula_arrow_tmp_tl +\tl_new:N \l__chemformula_arrow_type_tl +\tl_new:N \l__chemformula_arrow_penalty_tl +\tl_set:Nn \l__chemformula_arrow_penalty_tl { 0 } +\tl_new:N \l__chemformula_arrow_offset_tl +\tl_set:Nn \l__chemformula_arrow_offset_tl { .75em } +\tl_new:N \l__chemformula_plus_penalty_tl +\tl_set:Nn \l__chemformula_plus_penalty_tl { 700 } +\tl_new:N \l__chemformula_bond_penalty_tl +\tl_set:Nn \l__chemformula_bond_penalty_tl { 10000 } +\tl_new:N \l__chemformula_name_tmp_tl +\tl_new:N \l__chemformula_chemformula_tmpa_tl +\tl_new:N \g__chemformula_options_tl +\tl_new:N \g__chemformula_output_tl +\tl_new:N \l__chemformula_input_tl +\tl_new:N \l__chemformula_stoich_tl +\tl_new:N \l__chemformula_decimal_output_tl +\tl_set:Nn \l__chemformula_decimal_output_tl { . } +\tl_new:N \l__chemformula_font_family_tl +\tl_set_eq:NN \l__chemformula_font_family_tl \f@family +\tl_new:N \l__chemformula_font_series_tl +\tl_set_eq:NN \l__chemformula_font_series_tl \f@series +\tl_new:N \l__chemformula_font_shape_tl +\tl_set_eq:NN \l__chemformula_font_shape_tl \f@shape +\tl_new:N \l__chemformula_format_tl +\tl_new:N \l__chemformula_fontspec_options_tl +\tl_new:N \l__chemformula_fontspec_argument_tl +\tl_new:N \l__chemformula_name_format_tl +\tl_set:Nn \l__chemformula_name_format_tl { \scriptsize\centering } +\tl_new:N \l_chemormula_sup_super_factor_tl +\tl_new:N \l__chemformula_subscript_shift_additional_tl +\tl_set:Nn \l__chemformula_subscript_shift_additional_tl { 0pt } +\tl_new:N \l__chemformula_superscript_shift_additional_tl +\tl_set:Nn \l__chemformula_superscript_shift_additional_tl { 0pt } +\tl_new:N \l__chemformula_subscript_tl +\tl_new:N \l__chemformula_superscript_tl +\tl_new:N \g__chemformula_input_up_tl +\tl_new:N \l__chemformula_elspec_angle_tl +\tl_new:N \l__chemformula_elspec_radius_tl +\tl_set:Nn \l__chemformula_elspec_radius_tl { .5ex } +\tl_new:N \l__chemformula_elspec_default_type_tl +\tl_set:Nn \l__chemformula_elspec_default_type_tl { pair } +\tl_const:Nx \c_chemformula_colon_tl { \token_to_str:N : } +\tl_new:N \l__chemformula_kroegervink_positive_style_tl +\tl_new:N \l__chemformula_kroegervink_neutral_tl +\tl_set:Nn \l__chemformula_kroegervink_neutral_tl { $\times$ } + +% property lists: +\prop_new:N \l__chemformula_arrows_code_prop +\prop_new:N \l__chemformula_cmpd_prop +\prop_new:N \l__chemformula_bonds_prop +\prop_new:N \l__chemformula_stoich_prop +\prop_new:N \l__chemformula_charge_prop +\prop_new:N \l__chemformula_numbers_prop +\prop_new:N \l__chemformula_no_stoich_prop +\prop_new:N \l__chemformula_lewis_elspec_types_prop +\prop_new:N \l__chemformula_kroegervink_prop + +% sequences: +\seq_new:N \l__chemformula_arrows_type_seq +\seq_new:N \l__chemformula_input_seq + +% boxes: +\box_new:N \l__chemformula_arrow_arg_i_box +\box_new:N \l__chemformula_arrow_arg_ii_box +\box_new:N \l__chemformula_superscript_box +\box_new:N \l__chemformula_subscript_box + +% -------------------------------------------------------------------------- +% general and helper functions: +\cs_new:Npn \chemformula_tikz:nn #1#2 + { \tikz [ #1 ] { #2 } } +\cs_generate_variant:Nn \chemformula_tikz:nn { xn,nf } + +\cs_new:Npn \chemformula_draw:nn #1#2 + { \draw [ #1 ] #2 ; } +\cs_generate_variant:Nn \chemformula_draw:nn { xn,nx,xx,xf,Vn } + +\cs_new:Npn \chemformula_node:nn #1#2 + { \node [ #1 ] { #2 } ; } +\cs_generate_variant:Nn \chemformula_node:nn { x } + +\cs_new:Npn \chemformula_node:nnn #1#2#3 + { \node [ #1 ] ( #2 ) { #3 } ; } +\cs_generate_variant:Nn \chemformula_node:nnn { nx } + +\cs_new:Npn \chemformula_allow_break: + { \tex_penalty:D \c_zero } + +\cs_new_protected:Npn \chemformula_leave_vmode: + { \hbox_unpack:N \c_empty_box } + +\cs_new:Npn \chemformula_nobreak: + { \tex_penalty:D \c_ten_thousand } + +\cs_new:Npn \chemformula_skip_nobreak:N #1 + { + \chemformula_nobreak: + \skip_horizontal:N #1 + \chemformula_nobreak: + } + +\cs_new_protected:Npn \chemformula_skip_nobreak_penalty:Nn #1#2 + { + \chemformula_nobreak: + \skip_horizontal:N #1 + \tex_penalty:D #2 \scan_stop: + } +% \binoppenalty=\maxdimen +% \relpenalty=\maxdimen + +\cs_new_protected:Npn \chemformula_dim_to_width:Nn #1#2 + { + \hbox_set:Nn \l__chemformula_tmpa_box { #2 } + \dim_set:Nn #1 { \box_wd:N \l__chemformula_tmpa_box } + \box_clear:N \l__chemformula_tmpa_box + } + +% an l3 conditional that can test 2e's conditionals that go like +% \iffoo ... \else ... \fi +% see http://tex.stackexchange.com/a/119806/5049 +\prg_new_conditional:Npnn \chemformula_latex_if:n #1 {p,T,F,TF} + { \use:c { if #1 } \prg_return_true: \else: \prg_return_false: \fi: } + +% -------------------------------------------------------------------------- +% prevent externalisation of tikz parts of the formulae: +\AtBeginDocument { \providecommand \tikzexternaldisable {} } + +\keys_define:nn { chemmacros / chemformula } + { + tikz-external-disable .bool_set:N = + \l__chemformula_tikzexternaldisable_bool + } + +\cs_new_protected:Npn \chemformula_tikzexternaldisable: + { + \bool_if:NT \l__chemformula_tikzexternaldisable_bool + { \tikzexternaldisable } + } + +% -------------------------------------------------------------------------- +% circled charge signs: +\cs_new_protected:Npn \chemformula_fplus: + { \ensuremath { \__chemformula_fplus: } } + +\cs_new:Npn \__chemformula_fplus: + { \mathpalette \__chemformula_fplus_aux: \bigcirc } + +\cs_new:Npn \__chemformula_fplus_aux: #1#2 + { + \ooalign + { + \tex_hfil:D + \c_math_toggle_token + #1 + \chemformula_plain_plus: + \c_math_toggle_token + \tex_hfil:D + \tex_cr:D + \tex_hfil:D + \c_math_toggle_token #1#2 \c_math_toggle_token + \tex_hfil:D + \tex_cr:D + } + } + +\cs_new_protected:Npn \chemformula_fminus: + { \ensuremath { \__chemformula_fminus: } } + +\cs_new:Npn \__chemformula_fminus: + { \mathpalette \__chemformula_fminus_aux_aux: \bigcirc } + +\cs_new:Npn \__chemformula_fminus_aux_aux: #1#2 + { + \ooalign + { + \tex_hfil:D + \c_math_toggle_token + #1 + \chemformula_plain_minus: + \c_math_toggle_token + \tex_hfil:D + \tex_cr:D + \tex_hfil:D + \c_math_toggle_token #1#2 \c_math_toggle_token + \tex_hfil:D + \tex_cr:D + } + } + +\AtBeginDocument{ + \@ifpackageloaded { chemmacros } + { + \bool_if:nT + { \l__chemmacros_circled_bool && !\l__chemmacros_circled_formal_bool } + { \bool_set_true:N \l__chemformula_formal_charges_bool } + \bool_if:NF \l__chemmacros_circled_chem_bool + { \bool_set_false:N \l__chemformula_formal_chem_bool } + \keys_define:nn { chemmacros / option } + { + circletype .choice: , + circletype / math .code:n = + { + \bool_set_false:N \l__chemmacros_circled_chem_bool + \bool_set_false:N \l__chemformula_formal_chem_bool + } , + circletype / chem .code:n = + { + \bool_set_true:N \l__chemmacros_circled_chem_bool + \bool_set_true:N \l__chemformula_formal_chem_bool + } , + circletype .default:n = chem , + circled .choice: , + circled / none .code:n = + { + \bool_set_false:N \l__chemmacros_circled_bool + \bool_set_false:N \l__chemmacros_circled_formal_bool + \bool_set_false:N \l__chemformula_formal_charges_bool + } , + circled / formal .code:n = + { + \bool_set_true:N \l__chemmacros_circled_bool + \bool_set_true:N \l__chemmacros_circled_formal_bool + \bool_set_false:N \l__chemformula_formal_charges_bool + } , + circled / all .code:n = + { + \bool_set_true:N \l__chemmacros_circled_bool + \bool_set_false:N \l__chemmacros_circled_formal_bool + \bool_set_true:N \l__chemformula_formal_charges_bool + } , + circled .default:n = all + } + } + { } +} + +\cs_new_protected:Npn \chemformula_plain_plus: + { + \bool_if:NTF \l__chemformula_charge_style_math_bool + { \ensuremath { + } } + { \mode_if_math:TF { \text { + } } { + } } + } + +\cs_new_protected:Npn \chemformula_plus: + { + \bool_if:NTF \l__chemformula_formal_charges_bool + { + \bool_if:NTF \l__chemformula_formal_chem_bool + { \chemformula_fplus: } + { + \mode_if_math:TF + { \oplus } + { \c_math_toggle_token \oplus \c_math_toggle_token } + } + } + { \chemformula_plain_plus: } + } + +\cs_new_protected:Npn \chemformula_plain_minus: + { + \bool_if:NTF \l__chemformula_charge_style_math_bool + { \ensuremath { - } } + { \mode_if_math:TF { \text { \textendash } } { \textendash } } + } + +\cs_new_protected:Npn \chemformula_minus: + { + \bool_if:NTF \l__chemformula_formal_charges_bool + { + \bool_if:NTF \l__chemformula_formal_chem_bool + { \chemformula_fminus: } + { + \mode_if_math:TF + { \ominus } + { \c_math_toggle_token \ominus \c_math_toggle_token } + } + } + { \chemformula_plain_minus: } + } + +% -------------------------------------------------------------------------- +% Some basic internal commands: + +\cs_new_protected:Npn \chemformula_radical_or_decimal: + { + \peek_meaning:NTF \c_group_begin_token + { \chemformula_decimal: } + { \chemformula_radical: } + } + +\cs_new_protected:Npn \chemformula_radical: + { + \hbox_overlap_right:n + { + \chemformula_tikz:xn + { + \l__chemformula_radical_style_tl , + baseline , + minimum~ height = 0pt , + minimum~ width = 0pt , + inner~ sep = 0pt , + outer~ sep = 0pt , + overlay + } + { + \fill (0,0) + ++( + \l__chemformula_radical_hshift_dim , + \l__chemformula_radical_vshift_dim + ) + circle (\l__chemformula_radical_radius_dim) ; + } + } + \skip_horizontal:N \l__chemformula_radical_space_dim + } + +\keys_define:nn { chemmacros / chemformula } + { + % TikZ style: + radical-style .tl_set:N = \l__chemformula_radical_style_tl , + radical-radius .dim_set:N = \l__chemformula_radical_radius_dim , + % shift before: + radical-hshift .dim_set:N = \l__chemformula_radical_hshift_dim , + radical-vshift .dim_set:N = \l__chemformula_radical_vshift_dim , + % space after: + radical-space .dim_set:N = \l__chemformula_radical_space_dim + } + +\cs_new:Npn \chemformula_adduct: + { + \skip_horizontal:N \l__chemformula_adduct_space_dim + \textperiodcentered + \skip_horizontal:N \l__chemformula_adduct_space_dim + } +\cs_new_eq:NN \chemformula_star_adduct: \chemformula_adduct: + +% -------------------------------------------------------------------------- +% Kroeger-Vink notation +\cs_new_protected:Npn \chemformula_kroegervink_negative: + { \ensuremath { \prime } } + +\cs_new_protected:Npn \chemformula_kroegervink_neutral: + { \ensuremath { \text {\l__chemformula_kroegervink_neutral_tl } } } + +\cs_new_protected:Npn \chemformula_kroegervink_positive: + { + \hbox_overlap_right:n + { + \chemformula_tikz:xn + { + \l__chemformula_kroegervink_positive_style_tl , + baseline , + minimum~ height = 0pt , + minimum~ width = 0pt , + inner~ sep = 0pt , + outer~ sep = 0pt , + overlay + } + { + \fill (0,0) + ++( + \l__chemformula_kroegervink_positive_hshift_dim , + \l__chemformula_kroegervink_positive_vshift_dim + ) + circle (\l__chemformula_kroegervink_positive_radius_dim) ; + } + } + \skip_horizontal:N \l__chemformula_kroegervink_positive_space_dim + } + +\cs_new:Npn \chemformula_prime: + { + \bool_if:NTF \l__chemformula_kroegervink_bool + { \chemformula_kroegervink_negative: } + { ' } + } + +\keys_define:nn { chemmacros / chemformula } + { + kroeger-vink .bool_set:N = + \l__chemformula_kroegervink_bool , + % TikZ style: + kv-positive-style .tl_set:N = + \l__chemformula_kroegervink_positive_style_tl , + kv-positive-radius .dim_set:N = + \l__chemformula_kroegervink_positive_radius_dim , + % spacing: + kv-positive-hshift .dim_set:N = + \l__chemformula_kroegervink_positive_hshift_dim , + kv-positive-vshift .dim_set:N = + \l__chemformula_kroegervink_positive_vshift_dim , + kv-positive-offset .dim_set:N = + \l__chemformula_kroegervink_positive_space_dim , + % symbol: + kv-neutral-symbol .tl_set:N = + \l__chemformula_kroegervink_neutral_tl + } + +% -------------------------------------------------------------------------- +% ARROW DEFINITION +% arrow heads: + +% full tip for pairs +\pgfarrowsdeclare { cf~internal } { cf~internal } + { + \dim_set:Nn \l__chemformula_arrow_head_dim + { 2.5pt + 2.5\pgflinewidth } + \pgfarrowsleftextend { -\l__chemformula_arrow_head_dim } + \pgfarrowsrightextend { .5\pgflinewidth } + } + { + \dim_set:Nn \l__chemformula_arrow_head_dim + { 2.5pt + 2.5\pgflinewidth } + \pgfsetdash {} { 0pt } + \pgfsetroundjoin + \pgfsetroundcap + \pgfpathmoveto { \pgfpoint { 0pt } { 0pt } } + \pgfpathlineto + { + \pgfpoint + { -\l__chemformula_arrow_head_dim } + { .3\l__chemformula_arrow_head_dim } + } + \pgfpathlineto + { \pgfpoint { -.5\l__chemformula_arrow_head_dim } { 0pt } } + \pgfpathlineto + { + \pgfpoint + { -\l__chemformula_arrow_head_dim } + { -.3\l__chemformula_arrow_head_dim } + } + \pgfpathlineto { \pgfpoint { 0pt } { 0pt } } + \pgfusepathqfillstroke + } + +% half tip on the left +\pgfarrowsdeclare { left~cf~internal } { left~cf~internal } + { + \dim_set:Nn \l__chemformula_arrow_head_dim + { 2.5pt + 2.5\pgflinewidth } + \pgfarrowsleftextend { -\l__chemformula_arrow_head_dim } + \pgfarrowsrightextend { .5\pgflinewidth } + } + { + \dim_set:Nn \l__chemformula_arrow_head_dim + { 2.5pt + 2.5\pgflinewidth } + \pgfsetdash {} { 0pt } + \pgfsetroundjoin + \pgfsetroundcap + \pgfpathmoveto { \pgfpoint { 0pt } { 0pt } } + \pgfpathlineto + { + \pgfpoint + { -\l__chemformula_arrow_head_dim } + { .3\l__chemformula_arrow_head_dim } + } + \pgfpathlineto { \pgfpoint { -.5\l__chemformula_arrow_head_dim } { 0pt } } + \pgfpathlineto { \pgfpoint { 0pt } { 0pt } } + \pgfusepathqfillstroke + } + +% half tip in the right +\pgfarrowsdeclare { right~cf~internal } { right~cf~internal } + { + \dim_set:Nn \l__chemformula_arrow_head_dim + { 2.5pt + 2.5\pgflinewidth } + \pgfarrowsleftextend { -\l__chemformula_arrow_head_dim } + \pgfarrowsrightextend { .5\pgflinewidth } + } + { + \dim_set:Nn \l__chemformula_arrow_head_dim + { 2.5pt + 2.5\pgflinewidth } + \pgfsetdash {} { 0pt } + \pgfsetroundjoin + \pgfsetroundcap + \pgfpathmoveto { \pgfpoint { 0pt } { 0pt } } + \pgfpathlineto + { + \pgfpoint + { -\l__chemformula_arrow_head_dim } + { -.3\l__chemformula_arrow_head_dim } + } + \pgfpathlineto { \pgfpoint { -.5\l__chemformula_arrow_head_dim } { 0pt } } + \pgfpathlineto { \pgfpoint { 0pt } { 0pt } } + \pgfusepathqfillstroke + } + +\pgfkeys{ + cf~ /.tip = {cf~internal} , + left~cf~ /.tip = {left~cf~internal} , + right~cf~ /.tip = {right~cf~internal} +} + +% -------------------------------------------------------------------------- +% determine length in dependency of labels +\cs_new_protected:Npn \__chemformula_determine_arrow_length:NN #1#2 + { + \dim_set:NV \l__chemformula_arrow_offset_dim \l__chemformula_arrow_offset_tl + \box_set_eq:NN \l__chemformula_tmpa_box #1 + \dim_set:Nn \l__chemformula_tmpa_dim { \box_wd:N \l__chemformula_tmpa_box } + \box_set_eq:NN \l__chemformula_tmpa_box #2 + \dim_set:Nn \l__chemformula_tmpb_dim { \box_wd:N \l__chemformula_tmpa_box } + \box_clear:N \l__chemformula_tmpa_box + \dim_compare:nTF { \l__chemformula_tmpa_dim >= \l__chemformula_tmpb_dim } + { \dim_set_eq:NN \l__chemformula_arrow_length_dim \l__chemformula_tmpa_dim } + { \dim_set_eq:NN \l__chemformula_arrow_length_dim \l__chemformula_tmpb_dim } + \dim_add:Nn \l__chemformula_arrow_length_dim + { 2\l__chemformula_arrow_offset_dim } + \dim_compare:nF + { \l__chemformula_arrow_length_dim > \l__chemformula_arrow_minimum_length_dim } + { + \dim_set_eq:NN + \l__chemformula_arrow_length_dim + \l__chemformula_arrow_minimum_length_dim + } + \dim_set:Nn \l__chemformula_arrow_shortage_dim + { + ( + \l__chemformula_arrow_length_dim + - + \l__chemformula_arrow_length_dim * + \dim_ratio:nn { \l__chemformula_arrow_ratio_tl pt } { 1pt } + ) * 1/2 + } + \box_set_eq:NN \l__chemformula_tmpa_box #1 + \dim_set:Nn \l__chemformula_tmpa_dim + { \box_ht:N \l__chemformula_tmpa_box + \box_dp:N \l__chemformula_tmpa_box } + \box_set_eq:NN \l__chemformula_tmpa_box #2 + \dim_set:Nn \l__chemformula_tmpb_dim + { \box_ht:N \l__chemformula_tmpa_box + \box_dp:N \l__chemformula_tmpa_box } + \box_clear:N \l__chemformula_tmpa_box + \dim_compare:nTF { \l__chemformula_tmpa_dim >= \l__chemformula_tmpb_dim } + { \dim_set_eq:NN \l__chemformula_arrow_label_height_dim \l__chemformula_tmpa_dim } + { \dim_set_eq:NN \l__chemformula_arrow_label_height_dim \l__chemformula_tmpb_dim } + } + +% -------------------------------------------------------------------------- +% define arrow types + +% read arrow labels: + +\cs_new:Npn \chemformula_arrow_labels:nn #1#2 + { + \hbox_set:Nn \l__chemformula_arrow_arg_i_box + { \tl_use:N \l__chemformula_arrow_label_style_tl #1 } + \hbox_set:Nn \l__chemformula_arrow_arg_ii_box + { \tl_use:N \l__chemformula_arrow_label_style_tl #2 } + % now that we have both arguments do the actual drawing: + \prop_get:NVN \l__chemformula_arrows_code_prop + \l__chemformula_arrow_type_tl + \l__chemformula_tmpb_tl + \__chemformula_arrow_draw:V \l__chemformula_tmpb_tl + } + +% get arrows (for the use in \ch to replace the symbol) +% #1: symbol +\cs_new_protected:Npn \__chemformula_arrows_get:n #1 + { + % first clear the arguments + \box_clear:N \l__chemformula_arrow_arg_i_box + \box_clear:N \l__chemformula_arrow_arg_ii_box + % then get the arrow type + \tl_set:Nn \l__chemformula_arrow_type_tl { #1 } + } + +% this will be \arrow inside \ch +\DeclareDocumentCommand \charrow { mO{}O{} } + { + \group_begin: + \chemformula_tikzexternaldisable: + \__chemformula_arrows_get:n { #1 } + \chemformula_arrow_labels:nn { #2 } { #3 } + \group_end: + } + +% draw the arrows +\cs_new:Npn \__chemformula_arrow_draw:n #1 + { + \chemformula_nobreak: + % prepare arrow code for drawing: + \tl_set_rescan:Nnn \l__chemformula_tmpc_tl + { \char_set_catcode_letter:N \_ } { #1 } + % determine length of the arrow + \__chemformula_determine_arrow_length:NN + \l__chemformula_arrow_arg_i_box + \l__chemformula_arrow_arg_ii_box + \chemformula_tikz:nf + { inner~sep=0, baseline=(chemformula_arrow_start.base) } + { + % the coordinates + \chemformula_draw:xn + { \l__chemformula_arrow_style_tl } + { + coordinate (chemformula_arrow_start) (0pt,0pt) + ++ ( \l__chemformula_compound_sep_tl , .3432em) + ++ (0pt,\l__chemformula_arrow_yshift_dim) + coordinate (cf_arrow_start) + ++ ( .5 * \dim_use:N \l__chemformula_arrow_length_dim , 0pt) + coordinate (cf_arrow_mid) + ++ ( .5 * \dim_use:N \l__chemformula_arrow_length_dim , 0pt) + coordinate (cf_arrow_end) + ++ ( \l__chemformula_compound_sep_tl , 0pt ) + (cf_arrow_start) ++ (\l__chemformula_arrow_shortage_dim , 0pt) + coordinate (cf_arrow_mid_start) + (cf_arrow_end) ++ (-\l__chemformula_arrow_shortage_dim , 0pt) + coordinate (cf_arrow_mid_end) + } + % the arrow labels: + \draw + node + [ above=\l__chemformula_arrow_label_offset_dim ] at (cf_arrow_mid) + { \box_use:N \l__chemformula_arrow_arg_i_box } + node + [ below=\l__chemformula_arrow_label_offset_dim ] at (cf_arrow_mid) + { \box_use:N \l__chemformula_arrow_arg_ii_box } + ; + \tl_use:N \l__chemformula_tmpc_tl + } + \chemformula_skip_nobreak_penalty:Nn + \c_zero_skip + { \l__chemformula_arrow_penalty_tl } + } +\cs_generate_variant:Nn \__chemformula_arrow_draw:n { V } + +% commands to declare arrows (can also be used by users): +% #1: symbol, #2: code +\NewDocumentCommand \NewChemArrow { mm } + { + \prop_if_in:NnTF \l__chemformula_arrows_code_prop { #1 } + { \msg_error:nnn { chemformula } { new-arrow } { #1 } } + { + % store type in the sequence and code in the property list + \seq_put_right:Nn \l__chemformula_arrows_type_seq { #1 } + \prop_put:Nnn \l__chemformula_arrows_code_prop { #1 } { #2 } + } + } + +\NewDocumentCommand \DeclareChemArrow { mm } + { + \prop_if_in:NnF \l__chemformula_arrows_code_prop { #1 } + { \seq_put_right:Nn \l__chemformula_arrows_type_seq { #1 } } + % store type in the sequence and code in the property list + \prop_put:Nnn \l__chemformula_arrows_code_prop { #1 } { #2 } + } + +\NewDocumentCommand \RenewChemArrow { mm } + { + \prop_if_in:NnTF \l__chemformula_arrows_code_prop { #1 } + { \prop_put:Nnn \l__chemformula_arrows_code_prop { #1 } { #2 } } + { \msg_error:nnn { chemformula } { renew-arrow } { #1 } } + } + +\NewDocumentCommand \ShowChemArrow { m } + { + \prop_get:NnN \l__chemformula_arrows_code_prop { #1 } \l__chemformula_tmpa_tl + \tl_to_str:N \l__chemformula_tmpa_tl + } + +% declare arrows in the right order +% e.g. <-> must be declared before -> in order to search & replace it first +% resonance arrow: +\NewChemArrow { <-> } + { \draw[chemarrow,cf-cf] (cf_arrow_start) -- (cf_arrow_end) ; } +\NewChemArrow { -> } + { \draw[chemarrow,-cf] (cf_arrow_start) -- (cf_arrow_end) ; } +\NewChemArrow { <- } + { \draw[chemarrow,cf-] (cf_arrow_start) -- (cf_arrow_end) ; } +\NewChemArrow { <> } + { + \draw[chemarrow,-cf] + ([yshift=.2ex]cf_arrow_start) -- ([yshift=.2ex]cf_arrow_end) ; + \draw[chemarrow,cf-,] + ([yshift=-.2ex]cf_arrow_start) -- ([yshift=-.2ex]cf_arrow_end) ; + } +% isolobal arrow: +\NewChemArrow { <o> } + { + \draw[chemarrow,cf-cf] (cf_arrow_start) -- (cf_arrow_end) ; + \draw[chemarrow] + (cf_arrow_mid) .. controls ++(-.9ex,-1.5ex) and + ++(.9ex,-1.5ex) .. (cf_arrow_mid) ; + } +\NewChemArrow { <=>> } + { + \draw[chemarrow,-left~cf] + ([yshift=.15ex]cf_arrow_start) -- ([yshift=.15ex]cf_arrow_end) ; + \draw[chemarrow,left~cf-] + ([yshift=-.15ex]cf_arrow_mid_start) -- ([yshift=-.15ex]cf_arrow_mid_end) ; + } +\NewChemArrow { <<=> } + { + \draw[chemarrow,-left~cf] + ([yshift=.15ex]cf_arrow_mid_start) -- ([yshift=.15ex]cf_arrow_mid_end) ; + \draw[chemarrow,left~cf-] + ([yshift=-.15ex]cf_arrow_start) -- ([yshift=-.15ex]cf_arrow_end) ; + } +\NewChemArrow { <=> } + { + \draw[chemarrow,-left~cf] + ([yshift=.15ex]cf_arrow_start) -- ([yshift=.15ex]cf_arrow_end) ; + \draw[chemarrow,left~cf-] + ([yshift=-.15ex]cf_arrow_start) -- ([yshift=-.15ex]cf_arrow_end) ; + } +\NewChemArrow { >>=< } + { + \draw[chemarrow,right~cf-] + ([yshift=.15ex]cf_arrow_start) -- ([yshift=.15ex]cf_arrow_end) ; + \draw[chemarrow,-right~cf] + ([yshift=-.15ex]cf_arrow_mid_start) -- ([yshift=-.15ex]cf_arrow_mid_end) ; + } +\NewChemArrow { >=<< } + { + \draw[chemarrow,right~cf-] + ([yshift=.15ex]cf_arrow_mid_start) -- ([yshift=.15ex]cf_arrow_mid_end) ; + \draw[chemarrow,-right~cf] + ([yshift=-.15ex]cf_arrow_start) -- ([yshift=-.15ex]cf_arrow_end) ; + } +\NewChemArrow { >=< } + { + \draw[chemarrow,right~cf-] + ([yshift=.15ex]cf_arrow_start) -- ([yshift=.15ex]cf_arrow_end) ; + \draw[chemarrow,-right~cf] + ([yshift=-.15ex]cf_arrow_start) -- ([yshift=-.15ex]cf_arrow_end) ; + } +\NewChemArrow { <==> } + { + \draw[chemarrow,double~ equal~ sign~ distance,double,Implies-Implies] + (cf_arrow_start) -- (cf_arrow_end) ; + % \node at ([yshift=-.2ex]cf_arrow_mid) { $\Leftrightarrow$ } ; + } +\NewChemArrow { -/> } + { + \draw[chemarrow,-cf] (cf_arrow_start) -- (cf_arrow_end) ; + \draw[chemarrow] (cf_arrow_mid) ++ (.2ex,.4ex) -- ++(-.4ex,-.8ex) ; + \draw[chemarrow] (cf_arrow_mid) ++ (-.2ex,.4ex) -- ++(-.4ex,-.8ex) ; + } +\NewChemArrow { </- } + { + \draw[chemarrow,cf-] (cf_arrow_start) -- (cf_arrow_end) ; + \draw[chemarrow] (cf_arrow_mid) ++ (.2ex,.4ex) -- ++(-.4ex,-.8ex) ; + \draw[chemarrow] (cf_arrow_mid) ++ (.6ex,.4ex) -- ++(-.4ex,-.8ex) ; + } +% net reaction: +\NewChemArrow { == } { \node at ([yshift=-.2ex]cf_arrow_mid) { = } ; } + +% -------------------------------------------------------------------------- +% arrow customization +\keys_define:nn { chemmacros / chemformula } + { + arrow-offset .tl_set:N = \l__chemformula_arrow_offset_tl , + arrow-min-length .dim_set:N = \l__chemformula_arrow_minimum_length_dim , + arrow-yshift .dim_set:N = \l__chemformula_arrow_yshift_dim , + arrow-ratio .tl_set:N = \l__chemformula_arrow_ratio_tl , + label-offset .dim_set:N = \l__chemformula_arrow_label_offset_dim , + compound-sep .tl_set:N = \l__chemformula_compound_sep_tl , + arrow-style .tl_set:N = \l__chemformula_arrow_style_tl , + label-style .tl_set:N = \l__chemformula_arrow_label_style_tl , + arrow-penalty .tl_set:N = \l__chemformula_arrow_penalty_tl , + arrow-style .code:n = \tikzset { chemarrow/.style={#1} } , + } + +% -------------------------------------------------------------------------- +% MAIN COMMAND +\cs_new_protected:Npn \__chemformula_ch_main:n #1 + { + \group_begin: + \seq_set_split:Nnn \l__chemformula_input_seq { ~ } { #1 } + \cs_set_eq:NN \xspace \scan_stop: + % the next two aren't necessary any more but shouldn't do harm, too: + \cs_set_nopar:Npn \[ { [ } + \cs_set_nopar:Npn \] { ] } + \bool_set_true:N \l_chemformula_inside_ch_bool + \tl_if_blank:VF \g__chemformula_options_tl + { + \keys_set:nV + { chemmacros / chemformula } + \g__chemformula_options_tl + } + \seq_map_function:NN + \l__chemformula_input_seq + \chemformula_input:n + \__chemformula_prepare_output:N \l__chemformula_input_tl + \chemformula_write:V \l__chemformula_input_tl + \group_end: + } + +\cs_new:Npn \chemformula_write:n #1 + { + \mode_if_math:TF + { + \mathchoice + { \text { \chemformula_font_inner: #1 } } + { \text { \chemformula_font_inner: #1 } } + { \text { \scriptsize \chemformula_font_inner: #1 } } + { \text { \tiny \chemformula_font_inner: #1 } } + } + { \chemformula_font_inner: #1 } + } +\cs_generate_variant:Nn \chemformula_write:n { V } + +% internal version of \ch command: +\cs_new_protected:Npn \chemformula_ch:nn #1#2 + { + \group_align_safe_begin: + \chemformula_leave_vmode: + \tl_if_blank:nTF { #1 } + { \tl_gclear:N \g__chemformula_options_tl } + { \tl_gset:Nn \g__chemformula_options_tl { #1 } } + \__chemformula_ch_newline:w #2 \\ \q_no_value \q_stop + \group_align_safe_end: + \tl_use:N \g__chemformula_output_tl + \tl_gclear:N \g__chemformula_output_tl + } +\cs_generate_variant:Nn \chemformula_ch:nn { V , nV , VV } + +% Trickery to use \ch inside align environment: +% bypass \\: +\cs_new_protected:Npn \__chemformula_ch_newline:w #1 \\ #2 \q_stop + { + \__chemformula_ch_align:w #1 & \q_no_value \q_stop + \quark_if_no_value:nF { #2 } + { + \tl_gput_right:Nn \g__chemformula_output_tl { \\ } + % look for optional argument: + \peek_meaning:NTF [ + { \__chemformula_ch_newline_skip:w } + { \__chemformula_ch_newline:w } + #2 \q_stop + } + } + +\cs_new_protected:Npn \__chemformula_ch_newline_skip:w [ #1 ] + { + \tl_gput_right:Nn \g__chemformula_output_tl { [#1] } + \__chemformula_ch_newline:w + } + +% bypass &: +\cs_new_protected:Npn \__chemformula_ch_align:w #1 & #2 \q_stop + { + \__chemformula_ch_label:w #1 \label \q_no_value \q_stop + \quark_if_no_value:nF { #2 } + { + \tl_gput_right:Nn \g__chemformula_output_tl { & } + \__chemformula_ch_align:w #2 \q_stop + } + } + +% bypass \label: +\cs_new_protected:Npn \__chemformula_ch_label:w #1 \label #2 \q_stop + { + \__chemformula_ch_tag:w #1 \tag{} \q_no_value \q_stop + \quark_if_no_value:nF { #2 } + { + \tl_gput_right:Nn \g__chemformula_output_tl { \label } + \peek_meaning:NTF [ % ] + { \__chemformula_ch_label_opt:w } + { \__chemformula_ch_label_no_opt:n } + #2 \q_stop + } + } + +\cs_new_protected:Npn \__chemformula_ch_label_opt:w [ #1 ] #2 + { + \tl_gput_right:Nn \g__chemformula_output_tl { [{#1}] {#2} } + \__chemformula_ch_label:w + } + +\cs_new_protected:Npn \__chemformula_ch_label_no_opt:n #1 + { + \tl_gput_right:Nn \g__chemformula_output_tl { {#1} } + \__chemformula_ch_label:w + } + +% here's something not working when used together with `hyperref' +% which seems to be related to \nonumber +% bypass \tag: +\cs_new_protected:Npn \__chemformula_ch_tag:w #1 \tag#2 #3 \q_stop + { + \__chemformula_ch_intertext:w #1 \intertext{} \q_no_value \q_stop + \quark_if_no_value:nF { #3 } + { + \tl_gput_right:Nn \g__chemformula_output_tl { \protect\tag { #2 } } + \__chemformula_ch_tag:w #3 \q_stop + } + } + +% bypass \intertext: +\cs_new_protected:Npn \__chemformula_ch_intertext:w #1 \intertext#2 #3 \q_stop + { + \tl_gput_right:Nn \g__chemformula_output_tl + { \__chemformula_ch_main:n { #1 } } + \quark_if_no_value:nF { #3 } + { + \tl_gput_right:Nn \g__chemformula_output_tl { \intertext { #2 } } + \__chemformula_ch_intertext:w #3 \q_stop + } + } + +% -------------------------------------------------------------------------- +% user commands: +\NewDocumentCommand \ch { O{}m } + { \chemformula_ch:nn { #1 } { #2 } } + +\tl_new:N \l__chemformula_compound_tl +\cs_new_protected:Npn \chemformula_chcpd:nn #1#2 + { + \group_begin: + \keys_set:nn { chemmacros / chemformula } { #1 } + \__chemformula_save_catcodes: + \__chemformula_sanitize:Nn + \l__chemformula_chemformula_tmpa_tl + { #2 } + \chemformula_input_cmpd:VN + \l__chemformula_chemformula_tmpa_tl + \l__chemformula_compound_tl + \__chemformula_prepare_output:N \l__chemformula_compound_tl + \chemformula_write:V \l__chemformula_compound_tl + \group_end: + } + +\NewDocumentCommand \chcpd { O{}m } + { \chemformula_chcpd:nn { #1 } { #2 } } + +% -------------------------------------------------------------------------- +% arrow generation & detection +\cs_new:Npn \__chemformula_generate_arrows:Nn #1#2 + { + \tl_set_rescan:Nnn \l__chemformula_tmpa_tl + { + \char_set_catcode_other:N \> + \char_set_catcode_other:N \< + \char_set_catcode_other:N \- + \char_set_catcode_other:N \= + } + { #2 } + \seq_map_inline:Nn \l__chemformula_arrows_type_seq + { + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { ##1 } { \charrow { ##1 } } + } + \tl_set_eq:NN #1 \l__chemformula_tmpa_tl + } +\cs_generate_variant:Nn \__chemformula_generate_arrows:Nn { NV } + +\cs_new_protected:Npn \__chemformula_detect_arrows:n #1 + { + \bool_set_false:N \l__chemformula_is_arrow_bool + \prop_map_inline:Nn \l__chemformula_arrows_code_prop + { + \__chemformula_sanitize:Nn \l__chemformula_tmpa_tl { ##1 } + \tl_if_in:nVT { #1 } \l__chemformula_tmpa_tl + { \bool_set_true:N \l__chemformula_is_arrow_bool } + } + } + +% -------------------------------------------------------------------------- +% compound names +\cs_new:Npn \__chemformula_name_cmpd:w + { \peek_meaning:NTF ( { \chname } { ! } } + +\NewDocumentCommand \chname { R(){}R(){} } + { \chemformula_chwritebelow:nn { #1 } { #2 } } + +\cs_new:Npn \chemformula_chwritebelow:nn #1#2 + { +% \group_begin: +% \__chemformula_reset:Nn \l__chemformula_tmpa_tl { #1 } + \c_math_toggle_token + \underset + { + \bool_if:NF \l__chemformula_name_width_bool + { + \chemformula_dim_to_width:Nn \l__chemformula_name_dim + { \l__chemformula_name_format_tl #1 } + } + \parbox + { \dim_use:N \l__chemformula_name_dim } + { \l__chemformula_name_format_tl #1 } + } + { \text { \strut #2 } } + \c_math_toggle_token +% \group_end: + } + +\cs_new_protected:Npn \__chemformula_generate_name:Nn #1#2 + { + \__chemformula_sanitize:Nn \l__chemformula_tmpa_tl { #2 } + \tl_if_in:VnT \l__chemformula_tmpa_tl { ! } + { + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { ! } + { \__chemformula_name_cmpd:w } + } + \tl_set_eq:NN #1 \l__chemformula_tmpa_tl + } +\cs_generate_variant:Nn \__chemformula_generate_name:Nn { NV } + +\cs_new_protected:Npn \__chemformula_detect_name:n #1 + { + \bool_set_false:N \l__chemformula_is_name_bool + \tl_set:Nn \l__chemformula_tmpa_tl { #1 } + \tl_if_in:VnT \l__chemformula_tmpa_tl { ! } + { \bool_set_true:N \l__chemformula_is_name_bool } + } + +% -------------------------------------------------------------------------- +% parsing input +\prop_put:Nnn \l__chemformula_cmpd_prop { 0 } { \chemformula_subscript:n { 0 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 1 } { \chemformula_subscript:n { 1 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 2 } { \chemformula_subscript:n { 2 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 3 } { \chemformula_subscript:n { 3 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 4 } { \chemformula_subscript:n { 4 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 5 } { \chemformula_subscript:n { 5 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 6 } { \chemformula_subscript:n { 6 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 7 } { \chemformula_subscript:n { 7 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 8 } { \chemformula_subscript:n { 8 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { 9 } { \chemformula_subscript:n { 9 } } +\prop_put:Nnn \l__chemformula_cmpd_prop { * } { \chemformula_star_adduct: } +\prop_put:Nnn \l__chemformula_cmpd_prop { . } { \chemformula_adduct: } +\prop_put:Nnn \l__chemformula_cmpd_prop { - } { \chemformula_single_bond: } +\prop_put:Nnn \l__chemformula_cmpd_prop { = } { \chemformula_double_bond: } +\prop_put:Nnn \l__chemformula_cmpd_prop { + } { \chemformula_triple_bond: } +\prop_put:Nnn \l__chemformula_cmpd_prop { ' } { \chemformula_prime: } + +% numbers +\prop_put:Nnn \l__chemformula_numbers_prop { 0 } { 0 } +\prop_put:Nnn \l__chemformula_numbers_prop { 1 } { 1 } +\prop_put:Nnn \l__chemformula_numbers_prop { 2 } { 2 } +\prop_put:Nnn \l__chemformula_numbers_prop { 3 } { 3 } +\prop_put:Nnn \l__chemformula_numbers_prop { 4 } { 4 } +\prop_put:Nnn \l__chemformula_numbers_prop { 5 } { 5 } +\prop_put:Nnn \l__chemformula_numbers_prop { 6 } { 6 } +\prop_put:Nnn \l__chemformula_numbers_prop { 7 } { 7 } +\prop_put:Nnn \l__chemformula_numbers_prop { 8 } { 8 } +\prop_put:Nnn \l__chemformula_numbers_prop { 9 } { 9 } + +% behaviour in a charge +\prop_put:Nnn \l__chemformula_charge_prop { 0 } { \chemformula_charge_style:n { 0 } } +\prop_put:Nnn \l__chemformula_charge_prop { 1 } { \chemformula_charge_style:n { 1 } } +\prop_put:Nnn \l__chemformula_charge_prop { 2 } { \chemformula_charge_style:n { 2 } } +\prop_put:Nnn \l__chemformula_charge_prop { 3 } { \chemformula_charge_style:n { 3 } } +\prop_put:Nnn \l__chemformula_charge_prop { 4 } { \chemformula_charge_style:n { 4 } } +\prop_put:Nnn \l__chemformula_charge_prop { 5 } { \chemformula_charge_style:n { 5 } } +\prop_put:Nnn \l__chemformula_charge_prop { 6 } { \chemformula_charge_style:n { 6 } } +\prop_put:Nnn \l__chemformula_charge_prop { 7 } { \chemformula_charge_style:n { 7 } } +\prop_put:Nnn \l__chemformula_charge_prop { 8 } { \chemformula_charge_style:n { 8 } } +\prop_put:Nnn \l__chemformula_charge_prop { 9 } { \chemformula_charge_style:n { 9 } } +\prop_put:Nnn \l__chemformula_charge_prop { + } { \chemformula_plus: } +\prop_put:Nnn \l__chemformula_charge_prop { - } { \chemformula_minus: } +\prop_put:Nnn \l__chemformula_charge_prop { . } { \chemformula_radical_or_decimal: } +\prop_put:Nnn \l__chemformula_charge_prop { , } { \chemformula_decimal: } + +% stoichiometric factors +\prop_put:Nnn \l__chemformula_stoich_prop { 0 } { 0 } +\prop_put:Nnn \l__chemformula_stoich_prop { 1 } { 1 } +\prop_put:Nnn \l__chemformula_stoich_prop { 2 } { 2 } +\prop_put:Nnn \l__chemformula_stoich_prop { 3 } { 3 } +\prop_put:Nnn \l__chemformula_stoich_prop { 4 } { 4 } +\prop_put:Nnn \l__chemformula_stoich_prop { 5 } { 5 } +\prop_put:Nnn \l__chemformula_stoich_prop { 6 } { 6 } +\prop_put:Nnn \l__chemformula_stoich_prop { 7 } { 7 } +\prop_put:Nnn \l__chemformula_stoich_prop { 8 } { 8 } +\prop_put:Nnn \l__chemformula_stoich_prop { 9 } { 9 } +\prop_put:Nnn \l__chemformula_stoich_prop { . } { \chemformula_decimal: } +\prop_put:Nnn \l__chemformula_stoich_prop { , } { \chemformula_decimal: } +\prop_put:Nnn \l__chemformula_stoich_prop { / } { / } +\prop_put:Nnn \l__chemformula_stoich_prop { _ } { _ } +\prop_put:Nnn \l__chemformula_stoich_prop { ( } { ( } +\prop_put:Nnn \l__chemformula_stoich_prop { ) } { ) } + +\prop_put:Nnn \l__chemformula_no_stoich_prop { . } { } +\prop_put:Nnn \l__chemformula_no_stoich_prop { , } { } +\prop_put:Nnn \l__chemformula_no_stoich_prop { / } { } +\prop_put:Nnn \l__chemformula_no_stoich_prop { _ } { } +\prop_put:Nnn \l__chemformula_no_stoich_prop { ( } { } +\prop_put:Nnn \l__chemformula_no_stoich_prop { ) } { } + +\prop_put:Nnn \l__chemformula_kroegervink_prop { 0 } { \chemformula_charge_style:n { 0 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 1 } { \chemformula_charge_style:n { 1 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 2 } { \chemformula_charge_style:n { 2 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 3 } { \chemformula_charge_style:n { 3 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 4 } { \chemformula_charge_style:n { 4 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 5 } { \chemformula_charge_style:n { 5 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 6 } { \chemformula_charge_style:n { 6 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 7 } { \chemformula_charge_style:n { 7 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 8 } { \chemformula_charge_style:n { 8 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { 9 } { \chemformula_charge_style:n { 9 } } +\prop_put:Nnn \l__chemformula_kroegervink_prop { + } { \chemformula_plus: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { - } { \chemformula_minus: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { . } { \chemformula_radical_or_decimal: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { , } { \chemformula_decimal: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { ' } { \chemformula_kroegervink_negative: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { x } { \chemformula_kroegervink_neutral: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { * } { \chemformula_kroegervink_positive: } +\prop_put:Nnn \l__chemformula_kroegervink_prop { . } { \chemformula_kroegervink_positive: } + +% -------------------------------------------------------------------------- +% bonds: +\cs_new:Npn \chemformula@bondlength + { \l__chemformula_bond_dim } + +\cs_new:Npn \chemformula_single_bond: + { + \bool_if:NTF \l__chemformula_sup_bool + { \chemformula_minus: } + { \chemformula_bond:n { single } } + } + +\cs_new:Npn \chemformula_double_bond: + { \chemformula_bond:n { double } } + +\cs_new:Npn \chemformula_triple_bond: + { \chemformula_bond:n { triple } } + +\cs_new_protected:Npn \chemformula_bond:n #1 + { + \chemformula_skip_nobreak:N \l__chemformula_bond_space_dim + \group_begin: + \chemformula_tikzexternaldisable: + \chemformula_tikz:nn + { + inner~sep = 0pt , + outer~sep = 0pt , + text~height = 1em , + baseline = (chemformula-bond-ground.base) + } + { + \draw node[draw=none,minimum~height=1em,minimum~width=0] + (chemformula-bond-ground) at (0pt,0pt) {}; + \draw (chemformula-bond-ground) ++ (0pt,-.1716em) + coordinate (chemformula-bond-start) ; + \draw (chemformula-bond-start) ++(\l__chemformula_bond_dim ,0pt) + coordinate (chemformula-bond-end) ; + \tl_if_blank:nTF { #1 } + { \__chemformula_bond_draw:n { single } } + { \__chemformula_bond_draw:n { #1 } } + } + \group_end: + \chemformula_skip_nobreak_penalty:Nn + \l__chemformula_bond_space_dim + { \l__chemformula_bond_penalty_tl } + } + +\cs_new_protected:Npn \__chemformula_bond_draw:n #1 + { + \__chemformula_reset:Nn \l__chemformula_tmpa_tl { #1 } + % \tl_set_rescan:Nnn \l__chemformula_tmpa_tl {} { #1 } + \prop_get:NV \l__chemformula_bonds_prop + \l__chemformula_tmpa_tl + } + +\NewDocumentCommand \NewChemBond { mm } + { + \cs_if_exist:cTF { chemformula_bond_type_#1: } + { \msg_error:nnn { chemformula } { new-bond } { #1 } } + { + \cs_new:cpn { chemformula_bond_type_#1: } {} + \prop_put:Nnn \l__chemformula_bonds_prop { #1 } { #2 } + } + } + +\NewDocumentCommand \DeclareChemBond { mm } + { + \cs_if_exist:cF { chemformula_bond_type_#1: } + { \cs_new:cpn { chemformula_bond_type_#1: } {} } + \prop_put:Nnn \l__chemformula_bonds_prop { #1 } { #2 } + } + +\NewDocumentCommand \NewChemBondAlias { mm } + { + \cs_if_exist:cTF { chemformula_bond_type_#2: } + { + \cs_if_exist:cTF { chemformula_bond_type_#1: } + { \msg_error:nnn { chemformula } { new-bond } { #1 } } + { \cs_new:cpn { chemformula_bond_type_#1: } {} } + \prop_get:NnN \l__chemformula_bonds_prop { #2 } \l__chemformula_tmpa_tl + \prop_put:Nno \l__chemformula_bonds_prop { #1 } { \l__chemformula_tmpa_tl } + } + { \msg_error:nnnn { chemformula } { bond-alias } { #1 } { #2 } } + } + +\NewDocumentCommand \DeclareChemBondAlias { mm } + { + \cs_if_exist:cTF { chemformula_bond_type_#2: } + { + \cs_if_exist:cF { chemformula_bond_type_#1: } + { \cs_new:cpn { chemformula_bond_type_#1: } {} } + \prop_get:NnN \l__chemformula_bonds_prop { #2 } \l__chemformula_tmpa_tl + \prop_put:Nno \l__chemformula_bonds_prop { #1 } { \l__chemformula_tmpa_tl } + } + { \msg_error:nnnn { chemformula } { bond-alias } { #1 } { #2 } } + } + +\NewDocumentCommand \RenewChemBond { mm } + { + \cs_if_exist:cTF { chemformula_bond_type_#1: } + { \prop_put:Nnn \l__chemformula_bonds_prop { #1 } { #2 } } + { \msg_error:nnn { chemformula } { renew-bond } { #1 } } + } + +\NewDocumentCommand \ShowChemBond { m } + { + \prop_get:NnN \l__chemformula_bonds_prop { #1 } \l__chemformula_tmpa_tl + \tl_to_str:N \l__chemformula_tmpa_tl + } + +\NewDocumentCommand \bond { m } + { \chemformula_bond:n { #1 } } + +% now let's declare some default bonds: +\NewChemBond{single} + { \draw[chembond] (chemformula-bond-start) -- (chemformula-bond-end) ; } +\NewChemBondAlias{normal}{single} +\NewChemBondAlias{sb}{single} + +\NewChemBond{semisingle} + { \draw[chembond,densely~dotted] (chemformula-bond-start) -- (chemformula-bond-end) ; } +\NewChemBondAlias{dotted}{semisingle} + +\NewChemBond{double} + { + \draw (chemformula-bond-start) ++ (0pt,.0858em) coordinate (double-start-up) ; + \draw (chemformula-bond-end) ++ (0pt,.0858em) coordinate (double-end-up) ; + \draw (chemformula-bond-start) ++ (0pt,-.0858em) coordinate (double-start-down) ; + \draw (chemformula-bond-end) ++ (0pt,-.0858em) coordinate (double-end-down) ; + \draw[chembond] + (double-start-down) -- (double-end-down) + (double-start-up) -- (double-end-up) ; + } +\NewChemBondAlias{db}{double} + +\NewChemBond{semidouble} + { + \draw (chemformula-bond-start) ++ (0pt,.0858em) coordinate (double-start-up) ; + \draw (chemformula-bond-end) ++ (0pt,.0858em) coordinate (double-end-up) ; + \draw (chemformula-bond-start) ++ (0pt,-.0858em) coordinate (double-start-down) ; + \draw (chemformula-bond-end) ++ (0pt,-.0858em) coordinate (double-end-down) ; + \draw[chembond] (double-start-down) -- (double-end-down) ; + \draw[chembond,densely~dotted] (double-start-up) -- (double-end-up) ; + } + +\NewChemBondAlias{deloc}{semidouble} +% \DeclareChemBondAlias{deloc2}{semidouble} + +\NewChemBond{triple} + { + \draw (chemformula-bond-start) ++ (0pt,.1287em) coordinate (triple-start-up) ; + \draw (chemformula-bond-end) ++ (0pt,.1287em) coordinate (triple-end-up) ; + \draw (chemformula-bond-start) ++ (0pt,-.1287em) coordinate (triple-start-down) ; + \draw (chemformula-bond-end) ++ (0pt,-.1287em) coordinate (triple-end-down) ; + \draw[chembond] + (triple-start-down) -- (triple-end-down) + (chemformula-bond-start) -- (chemformula-bond-end) + (triple-start-up) -- (triple-end-up) ; + } +\NewChemBondAlias{tp}{triple} + +\NewChemBond{semitriple} + { + \draw (chemformula-bond-start) ++ (0pt,.1287em) coordinate (triple-start-up) ; + \draw (chemformula-bond-end) ++ (0pt,.1287em) coordinate (triple-end-up) ; + \draw (chemformula-bond-start) ++ (0pt,-.1287em) coordinate (triple-start-down) ; + \draw (chemformula-bond-end) ++ (0pt,-.1287em) coordinate (triple-end-down) ; + \draw[chembond] + (triple-start-down) -- (triple-end-down) + (chemformula-bond-start) -- (chemformula-bond-end) ; + \draw[chembond,densely~dotted] (triple-start-up) -- (triple-end-up) ; + } +\NewChemBondAlias{tdeloc}{semitriple} + +\NewChemBond{coordright} + { \draw[chembond,Butt~Cap->] (chemformula-bond-start) -- (chemformula-bond-end) ; } +\NewChemBondAlias{co>}{coordright} + +\NewChemBond{coordleft} + { \draw[chembond,<-Butt~Cap] (chemformula-bond-start) -- (chemformula-bond-end) ; } +\NewChemBondAlias{<co}{coordleft} + +% -------------------------------------------------------------------------- +% sub- and superscripts +\cs_new:Npn \__chemformula_number_style:n #1 + { + \bool_if:NTF \l__chemformula_number_style_math_bool + { \ensuremath { #1 } } + { \ensuremath { \text { #1 } } } + } +\cs_generate_variant:Nn \__chemformula_number_style:n { V } + +\cs_new_protected:Npn \chemformula_charge_style:n #1 + { + \bool_if:NTF \l__chemformula_charge_style_math_bool + { \ensuremath { #1 } } + { \ensuremath { \text { #1 } } } + } +\cs_generate_variant:Nn \chemformula_charge_style:n { V } + +% subscripts +% remove double or nested sub- and superscripts +\cs_new_protected:Npn \chemformula_subscript:n #1 + { + \chemformula_nobreak: + \tl_if_eq:nnTF { #1 }{ \chemformula_superscript:n } + { \__chemformula_subscript:n } + { + \tl_if_eq:nnTF { #1 }{ \chemformula_subscript:n } + { \__chemformula_subscript:n } + { + \tl_set:Nn \l__chemformula_tmpc_tl { #1 } + \tl_if_in:nnT { #1 } { \chemformula_subscript:n } + { \tl_remove_all:Nn \l__chemformula_tmpc_tl { \chemformula_subscript:n } } + \tl_if_in:nnT { #1 } { \chemformula_superscript:n } + { \tl_remove_all:Nn \l__chemformula_tmpc_tl { \chemformula_superscript:n } } + \__chemformula_subscript:V \l__chemformula_tmpc_tl + } + } + } + +% handle subscripts +\cs_new_protected:Npn \__chemformula_subscript:n #1 + { + \tl_put_right:Nn \l__chemformula_subscript_tl { #1 } + \__chemformula_clean_subscript: + % if a subscript follows just store and do nothing else + \peek_meaning:NF \chemformula_subscript:n + { + % if a superscript follows store and do nothing else + % if something else follows both sub- and superscript + \peek_meaning:NF \chemformula_superscript:n + { + \__chemformula_measure_subscript:V \l__chemformula_subscript_tl + \__chemformula_measure_superscript:V \l__chemformula_superscript_tl + \__chemformula_use_sub_and_superscript: + } + } + } +\cs_generate_variant:Nn \__chemformula_subscript:n { V } + +\cs_new_protected:Npn \__chemformula_clean_subscript: + { + \tl_replace_all:Nnn \l__chemformula_subscript_tl + { \chemformula_single_bond: } { \chemformula_minus: } + \tl_replace_all:Nnn \l__chemformula_subscript_tl + { \chemformula_triple_bond: } {\chemformula_plus: } + \tl_replace_all:Nnn \l__chemformula_subscript_tl + { \chemformula_adduct: } { . } + \tl_replace_all:Nnn \l__chemformula_subscript_tl + { \chemformula_star_adduct: } { * } + } + +\cs_new_protected:Npn \__chemformula_subscript_raise:N #1 + { + \hbox_set:Nn \l__chemformula_tmpa_box + { \c_math_toggle_token \scriptstyle Hg \c_math_toggle_token } + \hbox_set:Nn \l__chemformula_tmpb_box { Hg } + \dim_set:Nn #1 + { + - \box_ht:N \l__chemformula_tmpa_box + + .4 \box_ht:N \l__chemformula_tmpb_box + + \l__chemformula_subscript_shift_additional_tl + } + \tex_raise:D #1 + } + +\cs_new_protected:Npn \__chemformula_subscript_write:n #1 + { + \group_begin: + \tl_set_eq:NN \chemformula_subscript:n \use:n + \tl_set_eq:NN \chemformula_superscript:n \use:n + \__chemformula_subscript_raise:N \l__chemformula_subscript_shift_dim + \hbox:n + { + \c_math_toggle_token + \scriptstyle + \prop_get:NoNTF \l__chemformula_numbers_prop + { #1 } \l__chemformula_tmpa_tl + { \__chemformula_number_style:V \l__chemformula_tmpa_tl } + { \__chemformula_number_style:n { #1 } } + \c_math_toggle_token + } + \group_end: + } +\cs_generate_variant:Nn \__chemformula_subscript_write:n { V } + +\cs_new_protected:Npn \__chemformula_measure_subscript:n #1 + { + \hbox_set:Nn \l__chemformula_tmpa_box + { \__chemformula_subscript_write:n { #1 } } + \dim_set:Nn \l__chemformula_subscript_dim + { -\box_wd:N \l__chemformula_tmpa_box } + \box_clear:N \l__chemformula_tmpa_box + } +\cs_generate_variant:Nn \__chemformula_measure_subscript:n { V } + +% superscripts +% remove double or nested sub- and superscripts +\cs_new_protected:Npn \chemformula_superscript:n #1 + { + \chemformula_nobreak: + \tl_if_eq:nnTF { #1 } { \chemformula_superscript:n } + { \__chemformula_superscript:n } + { + \tl_if_eq:nnTF { #1 } { \chemformula_subscript:n } + { \__chemformula_superscript:n } + { + \tl_set:Nn \l__chemformula_tmpc_tl { #1 } + \tl_if_in:nnT { #1 } { \chemformula_subscript:n } + { \tl_remove_all:Nn \l__chemformula_tmpc_tl { \chemformula_subscript:n } } + \tl_if_in:nnT { #1 } { \chemformula_superscript:n } + { \tl_remove_all:Nn \l__chemformula_tmpc_tl { \chemformula_superscript:n } } + \__chemformula_superscript:V \l__chemformula_tmpc_tl + } + } + } + +% handle superscripts +\cs_new_protected:Npn \__chemformula_superscript:n #1 + { + \tl_put_right:Nn \l__chemformula_superscript_tl { #1 } + \__chemformula_clean_superscript: + \peek_meaning:NF \chemformula_superscript:n + { + \peek_meaning:NF \chemformula_subscript:n + { + \__chemformula_measure_subscript:V \l__chemformula_subscript_tl + \__chemformula_measure_superscript:V \l__chemformula_superscript_tl + \__chemformula_use_sub_and_superscript: + } + } + } +\cs_generate_variant:Nn \__chemformula_superscript:n { V } + +\cs_new_protected:Npn \__chemformula_clean_superscript: + { + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_single_bond: } { \chemformula_minus: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { - } { \chemformula_minus: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_triple_bond: } { \chemformula_plus: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { + } { \chemformula_plus: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_adduct: } { \chemformula_radical_or_decimal: } + \bool_if:NTF \l__chemformula_kroegervink_bool + { + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { ' } { \chemformula_kroegervink_negative: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_adduct: } { . } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_star_adduct: } { * } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_radical_or_decimal: } { . } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_prime: } { \chemformula_kroegervink_negative: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { * } { \chemformula_kroegervink_positive: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { . } { \chemformula_kroegervink_positive: } + } + { + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { \chemformula_star_adduct: } { * } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { . } { \chemformula_radical_or_decimal: } + \tl_replace_all:Nnn \l__chemformula_superscript_tl + { , } { \chemformula_decimal: } + } + } + +\cs_new_protected:Npn \__chemformula_superscript_raise:N #1 + { + \hbox_set:Nn \l__chemformula_tmpa_box + { \c_math_toggle_token \scriptstyle Hg \c_math_toggle_token } + \hbox_set:Nn \l__chemformula_tmpb_box { Hg } + \dim_set:Nn #1 + { + + \box_ht:N \l__chemformula_tmpb_box + - .5 \box_ht:N \l__chemformula_tmpa_box + + \l__chemformula_superscript_shift_additional_tl + } + \tex_raise:D #1 + } + +\cs_new_protected:Npn \__chemformula_superscript_write:n #1 + { + \group_begin: + \tl_set_eq:NN \chemformula_subscript:n \use:n + \tl_set_eq:NN \chemformula_superscript:n \use:n + \__chemformula_superscript_raise:N \l__chemformula_superscript_shift_dim + \hbox:n + { + \c_math_toggle_token + \scriptstyle + \bool_if:NTF \l__chemformula_kroegervink_bool + { + \prop_get:NoNTF \l__chemformula_kroegervink_prop + { #1 } \l__chemformula_tmpa_tl + { \tl_use:N \l__chemformula_tmpa_tl } + { \chemformula_charge_style:n { #1 } } + } + { + \prop_get:NoNTF \l__chemformula_charge_prop + { #1 } \l__chemformula_tmpa_tl + { \tl_use:N \l__chemformula_tmpa_tl } + { \chemformula_charge_style:n { #1 } } + } + \c_math_toggle_token + } + \group_end: + } +\cs_generate_variant:Nn \__chemformula_superscript_write:n { V } + +\cs_new_protected:Npn \__chemformula_measure_superscript:n #1 + { + \hbox_set:Nn \l__chemformula_tmpa_box + { \__chemformula_superscript_write:n { #1 } } + \dim_set:Nn \l__chemformula_superscript_dim + { -\box_wd:N \l__chemformula_tmpa_box } + \box_clear:N \l__chemformula_tmpa_box + } +\cs_generate_variant:Nn \__chemformula_measure_superscript:n { V } + +% typeset both sub- and superscripts +\cs_new_protected:Npn \__chemformula_use_sub_and_superscript: + { + \group_begin: + % No shift for excited state + \exp_args:No \tl_if_eq:nnT { \l__chemformula_superscript_tl } { * } + { + \bool_set_false:N \l__chemformula_charge_full_shift_bool + \dim_zero:N \l__chemformula_charge_shift_dim + } + % no shift for Kroeger Vink notation + \bool_if:NT \l__chemformula_kroegervink_bool + { + \bool_set_false:N \l__chemformula_charge_full_shift_bool + \dim_zero:N \l__chemformula_charge_shift_dim + } + % align to the right if isotope else to the left + \bool_if:NTF \l__chemformula_is_isotope_bool + { + \tl_if_blank:VF \l__chemformula_superscript_tl + { + \dim_compare:nT + { \l__chemformula_subscript_dim < \l__chemformula_superscript_dim } + { + \skip_horizontal:n { -\l__chemformula_subscript_dim } + \skip_horizontal:N \l__chemformula_superscript_dim + } + } + } + { + % add hshift to the superscript if there also is a subscript + \tl_if_blank:VF \l__chemformula_superscript_tl + { + \tl_if_blank:VF \l__chemformula_subscript_tl + { + \bool_if:NTF \l__chemformula_charge_full_shift_bool + { \skip_horizontal:n { -\l__chemformula_subscript_dim } } + { \skip_horizontal:N \l__chemformula_charge_shift_dim } + } + } + } + % typeset superscript + \tl_if_blank:VF \l__chemformula_superscript_tl + { + \__chemformula_superscript_write:V \l__chemformula_superscript_tl + % skip back for the subscript + \tl_if_blank:VF \l__chemformula_subscript_tl + { + \bool_if:NTF \l__chemformula_is_isotope_bool + { \skip_horizontal:N \l__chemformula_subscript_dim } + { + \skip_horizontal:N \l__chemformula_superscript_dim + \bool_if:NTF \l__chemformula_charge_full_shift_bool + { \skip_horizontal:N \l__chemformula_subscript_dim } + { + \skip_horizontal:n + { -\l__chemformula_charge_shift_dim } + } + } + } + } + % typeset subscript + \tl_if_blank:VF \l__chemformula_subscript_tl + { \__chemformula_subscript_write:V \l__chemformula_subscript_tl } + \bool_if:NF \l__chemformula_is_isotope_bool + { + \dim_zero:N \l__chemformula_tmpa_dim + \bool_if:NTF \l__chemformula_charge_full_shift_bool + { + \tl_if_blank:VF \l__chemformula_subscript_tl + { \dim_set:Nn \l__chemformula_tmpa_dim + { - \l__chemformula_superscript_dim } } + } + { + \tl_if_blank:VF \l__chemformula_superscript_tl + { + \tl_if_blank:VF \l__chemformula_subscript_tl + { + \dim_set:Nn \l__chemformula_tmpa_dim + { + \l__chemformula_charge_shift_dim + - \l__chemformula_superscript_dim + + \l__chemformula_subscript_dim + } + } + } + } + \dim_compare:nT { \l__chemformula_tmpa_dim > 0pt } + { \skip_horizontal:N \l__chemformula_tmpa_dim } + } + \group_end: + % clean up + \bool_set_false:N \l__chemformula_is_isotope_bool + \tl_clear:N \l__chemformula_subscript_tl + \tl_clear:N \l__chemformula_superscript_tl + } + +% -------------------------------------------------------------------------- +% read the input +\cs_new_protected:Npn \chemformula_input:n #1 + { + \__chemformula_save_catcodes: + \__chemformula_sanitize:Nn \l__chemformula_chemformula_tmpa_tl { #1 } + \chemformula_input_escape_text:V \l__chemformula_chemformula_tmpa_tl + \chemformula_input_escape_math:n { #1 } + \chemformula_input_stoich:n { #1 } + \__chemformula_clean_chemmacros:V \l__chemformula_chemformula_tmpa_tl + \chemformula_input_cmpd:VN + \l__chemformula_chemformula_tmpa_tl \l__chemformula_input_tl + \chemformula_input_arrow:n { #1 } + \chemformula_input_name:n { #1 } + \chemformula_input_plus:n { #1 } + \chemformula_input_up:n { #1 } + \chemformula_input_down:n { #1 } + } + +% -------------------------------------------------------------------------- +% set options for next compound: +\cs_new_protected:Npn \chemformula_input_options:n #1 + { + % \makeatother + \char_set_catcode_other:N \@ + \tl_set_rescan:Nnn \l__chemformula_tmpa_tl + { \char_set_catcode_letter:N \@ } + { #1 } + \tl_if_in:VnTF \l__chemformula_tmpa_tl { @ } + { + \bool_set_true:N \l__chemformula_options_bool + \bool_set_true:N \l__chemformula_is_option_bool + \tl_remove_all:Nn \l__chemformula_tmpa_tl { @ } + \exp_last_unbraced:Nno + \tl_set:Nn \l__chemformula_internal_options_tl + { \l__chemformula_tmpa_tl } + } + { \bool_set_false:N \l__chemformula_is_option_bool } + } + +% -------------------------------------------------------------------------- +% input stoichiometric factors +\cs_new:Npn \chemformula_decimal: { { \l__chemformula_decimal_output_tl } } + +\cs_new_protected:Npn \chemformula_input_stoich:n #1 + { + \bool_set_true:N \l__chemformula_stoich_bool + % the factor consists only of a parenthesis or a decimal marcer: + \bool_set_true:N \l__chemformula_no_stoich_bool + \tl_map_inline:nn { #1 } + { + \prop_get:NnNF \l__chemformula_no_stoich_prop { ##1 } \l__chemformula_tmpa_tl + { \bool_set_false:N \l__chemformula_no_stoich_bool } + } + \bool_if:NF \l__chemformula_no_stoich_bool + { + \tl_map_inline:nn { #1 } + { + \prop_get:NnNTF \l__chemformula_stoich_prop { ##1 } \l__chemformula_tmpa_tl + { + \bool_if:NT \l__chemformula_stoich_bool + { \tl_put_right:NV \l__chemformula_stoich_tl \l__chemformula_tmpa_tl } + } + { \bool_set_false:N \l__chemformula_stoich_bool } + } + } + \bool_if:NTF \l__chemformula_stoich_bool + { + \tl_if_blank:VF \l__chemformula_stoich_tl + { + \tl_put_left:Nn \l__chemformula_stoich_tl { \q_mark } + \__chemformula_sanitize:NV + \l__chemformula_stoich_tl + \l__chemformula_stoich_tl + \__chemformula_print_stoich:V + \l__chemformula_stoich_tl + } + } + { \tl_clear:N \l__chemformula_stoich_tl } + } + +\cs_new:Npn \chemformula_bm:n #1 { #1 } + +\cs_new:Npn \__chemformula_print_stoich:n #1 + { \chemformula_parse_stoich:n { #1 } } +\cs_generate_variant:Nn \__chemformula_print_stoich:n { V } + +\cs_new_protected:Npn \chemformula_parse_stoich:n #1 + { \__chemformula_parse_stoich:w #1 \q_nil } + +\NewDocumentCommand \chstoich { m } + { \chemformula_parse_stoich:n { #1 } } + +\cs_new:Npn \__chemformula_parse_stoich:w \q_mark #1 \q_nil + { + \__chemformula_bool_set_if_first_last:Nnnn + \l__chemformula_stoich_is_iupac_bool { #1 } { ( } { ) } + \bool_if:NTF \l__chemformula_stoich_is_iupac_bool + { \__chemformula_parse_stoich_iupac:n { #1 } } + { \__chemformula_parse_stoich_regular:n { #1 } } + } + +\DeclareInstance { xfrac } { chemformula-text-frac } { text } + { + slash-left-kern = -.15em , + numerator-top-sep = 0pt , + slash-right-kern = -.15em + } + +\cs_new:Npn \__chemformula_parse_stoich_regular:n #1 + { + \tl_if_in:nnTF { #1 } { / } + { \__chemformula_parse_stoich_frac:n { #1 } } + { \__chemformula_parse_stoich_decimal:n { #1 } } + } + +\cs_new_protected:Npn \__chemformula_parse_stoich_decimal:n #1 + { + % get head: + \tl_set:Nx \l__chemformula_tmpa_tl { \tl_head:n { #1 } } + \tl_set:Nn \l__chemformula_tmpb_tl { \chemformula_decimal: } + % check if stoich starts with decimal-marker and add leading 0 if so: + \tl_if_eq:NNTF \l__chemformula_tmpa_tl \l__chemformula_tmpb_tl + { \tl_put_right:Nn \l__chemformula_input_tl { 0#1 } } + { \tl_put_right:Nn \l__chemformula_input_tl { #1 } } + } + +\cs_new:Npn \__chemformula_parse_stoich_frac:n #1 + { + \tl_if_in:nnTF { #1 } { _ } + { \__chemformula_parse_stoich_misc_frac:w #1 \q_nil } + { \__chemformula_parse_stoich_frac:w #1 \q_nil } + } + +\cs_new_protected:Npn \__chemformula_parse_stoich_frac:w #1/#2 \q_nil + { + \tl_put_right:Nn \l__chemformula_input_tl + { \__chemformula_frac:nn { #1 } { #2 } } + } + +\cs_new_protected:Npn \__chemformula_parse_stoich_misc_frac:w #1_#2/#3 \q_nil + { + \tl_put_right:Nn \l__chemformula_input_tl + { \__chemformula_misc_frac:nnn { #1 } { #2 } { #3 } } + } + +\cs_new_protected:Npn \__chemformula_parse_stoich_iupac:n #1 + { + \bool_if:NTF \l__chemformula_stoich_parse_iupac_bool + { \__chemformula_parse_stoich_iupac:w #1 \q_nil } + { \tl_put_right:Nn \l__chemformula_input_tl { #1 } } + } + +\cs_new:Npn \__chemformula_parse_stoich_iupac:w (#1) \q_nil + { + \tl_put_right:Nn \l__chemformula_input_tl { ( } + \__chemformula_parse_stoich_regular:n { #1 } + \tl_put_right:Nn \l__chemformula_input_tl { ) } + } + +\cs_new_eq:NN \chemformula_math_frac:nn \frac + +\cs_new:Npn \__chemformula_frac:nn #1#2 + { + \bool_if:NT \l__chemformula_xfrac_bool + { \sfrac[chemformula-text-frac]{#1}{#2} } + \bool_if:NT \l__chemformula_nicefrac_bool + { \nicefrac{#1}{#2} } + \bool_if:NT \l__chemformula_mathfrac_bool + { + \c_math_toggle_token + \chemformula_math_frac:nn { \text { #1 } } { \text { #2 } } + \c_math_toggle_token + } + } + +\cs_new:Npn \__chemformula_misc_frac:nnn #1#2#3 + { + \bool_if:NT \l__chemformula_xfrac_bool + { #1\sfrac[chemformula-text-frac]{#2}{#3} } + \bool_if:NT \l__chemformula_nicefrac_bool + { #1\nicefrac{#2}{#3} } + \bool_if:NT \l__chemformula_mathfrac_bool + { + #1 + \c_math_toggle_token + \chemformula_math_frac:nn { \text { #2 } } { \text { #3 } } + \c_math_toggle_token + } + } + +% -------------------------------------------------------------------------- +% input compounds +\cs_new_protected:Npn \chemformula_input_cmpd:nN #1#2 + { + \tl_if_blank:VTF \l__chemformula_stoich_tl + { + \tl_if_eq:nnT { #1 } { + } + { \bool_set_true:N \l__chemformula_is_plus_bool } + \tl_if_eq:nnT { #1 } { - } + { \bool_set_true:N \l__chemformula_is_plus_bool } + \tl_if_eq:nnT { #1 } { v } + { \bool_set_true:N \l__chemformula_is_down_bool } + \tl_if_eq:nnT { #1 } { ^ } + { \bool_set_true:N \l__chemformula_is_up_bool } + \__chemformula_detect_arrows:n { #1 } + \__chemformula_detect_name:n { #1 } + \chemformula_input_options:n { #1 } + \bool_if:NT \l__chemformula_is_option_bool + { + \tl_put_right:Nn #2 + { + \group_begin: + \keys_set:nV + { chemmacros / chemformula } + \l__chemformula_internal_options_tl + } + } + \bool_if:nT + { + !\l__chemformula_is_option_bool && + !\l__chemformula_is_plus_bool && + !\l__chemformula_is_down_bool && + !\l__chemformula_is_up_bool && + !\l__chemformula_is_arrow_bool && + !\l__chemformula_is_name_bool && + !\l__chemformula_first_last_text_bool && + !\l__chemformula_first_last_math_bool + } + { + \__chemformula_handle_sub_and_superscripts:nN { #1 } #2 + \bool_if:NT \l__chemformula_options_bool + { + \tl_put_right:Nn #2 + { + \group_end: + \tl_clear:N \l__chemformula_internal_options_tl + } + \bool_set_false:N \l__chemformula_options_bool + } + } + } + { + \tl_put_right:Nn #2 + { \chemformula_skip_nobreak:N \l__chemformula_stoich_space_skip } + \tl_clear:N \l__chemformula_stoich_tl + } + } +\cs_generate_variant:Nn \chemformula_input_cmpd:nN { V } + +\cs_new_protected:Npn \chemformula_font_inner: + { + \bool_if:NT \l__chemformula_fss_bool + { + \bool_if:NT \l__chemformula_fss_family_bool + { \fontfamily { \l__chemformula_font_family_tl } } + \bool_if:NT \l__chemformula_fss_series_bool + { \fontseries { \l__chemformula_font_series_tl } } + \bool_if:NT \l__chemformula_fss_shape_bool + { \fontshape { \l__chemformula_font_shape_tl } } + \selectfont + } + \bool_if:NT \l__chemformula_fontspec_bool + { \chemformula_font: } + \tl_use:N \l__chemformula_format_tl + \exp_args:No \tl_if_eq:nnTF { \f@series } { bx } + { \cs_set_eq:NN \chemformula_bm:n \bm } + { \cs_set:Nn \chemformula_bm:n { ##1 } } + } + +\cs_new:Npn \chemformula_font: {} +\cs_new:Npn \__chemformula_fontspec:n #1 + { + \tl_if_in:nnTF { #1 } { [ } + { \__chemformula_fontspec_aux:w #1 \q_stop } + { \__chemformula_fontspec_aux:w [] #1 \q_stop } + } + +\cs_new:Npn \__chemformula_fontspec_aux:w [#1]#2 \q_stop + { \newfontfamily \chemformula_font: [ #1 ] { #2 } } + +\cs_new_protected:Npn \__chemformula_save_catcodes: + { + \cs_gset_protected:Npx \__chemformula_restore: + { + \char_set_catcode:nn { 95 } { \char_value_catcode:n { 95 } }% _ + \char_set_catcode:nn { 58 } { \char_value_catcode:n { 58 } }% : + \char_set_catcode:nn { 94 } { \char_value_catcode:n { 94 } }% ^ + \char_set_catcode:nn { 123 } { \char_value_catcode:n { 123 } }% { + \char_set_catcode:nn { 125 } { \char_value_catcode:n { 125 } }% } + \char_set_catcode:nn { 35 } { \char_value_catcode:n { 35 } }% # + \char_set_catcode:nn { 33 } { \char_value_catcode:n { 33 } }% ! + \char_set_catcode:nn { 34 } { \char_value_catcode:n { 34 } }% " + \char_set_catcode:nn { 60 } { \char_value_catcode:n { 60 } }% < + \char_set_catcode:nn { 62 } { \char_value_catcode:n { 62 } }% > + } + } + +\cs_new_protected:Npn \__chemformula_sanitize:Nn #1#2 + { + \tl_set_rescan:Nnn #1 + { + % expl3 catcodes: + \char_set_catcode_letter:N \_ + \char_set_catcode_letter:N \: + % I've forgotten why I put this here: + \char_set_catcode_math_superscript:N \^ + % disable some of the specials (needed for sub- and superscripts): + \char_set_catcode_letter:N \{ + \char_set_catcode_letter:N \} + % this one seems not necessary any more: + % \char_set_catcode_letter:N \\ + \char_set_catcode_letter:N \# + % make the naming work with babel languages like French that make + % ! active: + \char_set_catcode_other:N \! + % make the naming work with babel languages like Spanish that make + % < and > active: + \char_set_catcode_other:N \> + \char_set_catcode_other:N \< + % ensure " is other: + \char_set_catcode_other:N \" + } + { #2 } + } +\cs_generate_variant:Nn \__chemformula_sanitize:Nn { NV } + +\cs_new_protected:Npn \__chemformula_prepare_output:N #1 + { + \tl_set_rescan:NnV #1 + { + \__chemformula_restore: + \ExplSyntaxOn + \makeatletter + } + #1 + } + +\cs_new_protected:Npn \__chemformula_reset:Nn #1#2 + { \tl_set_rescan:Nnn #1 { \__chemformula_restore: } { #2 } } +\cs_generate_variant:Nn \__chemformula_reset:Nn { NV } + +\cs_new_protected:Npn \__chemformula_handle_sub_and_superscripts:nN #1#2 + { + \__chemformula_sanitize:Nn \l__chemformula_tmpa_tl { #1 } + % let's see if the compound starts with a sub- or superscript: + \tl_if_in:xnT { \tl_head:V \l__chemformula_tmpa_tl } { ^ } + { + \tl_put_left:Nn \l__chemformula_tmpa_tl + { \bool_set_true:N \l__chemformula_is_isotope_bool } + } + \tl_if_in:xnT { \tl_head:V \l__chemformula_tmpa_tl } { _ } + { + \tl_put_left:Nn \l__chemformula_tmpa_tl + { \bool_set_true:N \l__chemformula_is_isotope_bool } + } + \exp_args:NNx \prop_if_in:NnT \l__chemformula_numbers_prop + { \tl_head:V \l__chemformula_tmpa_tl } + { + \tl_put_left:Nn \l__chemformula_tmpa_tl + { \bool_set_true:N \l__chemformula_is_isotope_bool } + } + \tl_if_in:VnT \l__chemformula_tmpa_tl { ^ } + { + \tl_replace_all:Nnn \l__chemformula_tmpa_tl { ^ } + { \chemformula_superscript:n } + } + \tl_if_in:VnT \l__chemformula_tmpa_tl { _ } + { + \tl_replace_all:Nnn \l__chemformula_tmpa_tl { _ } + { \chemformula_subscript:n } + } + \int_zero:N \l__chemformula_count_tokens_int + \tl_map_inline:Nn \l__chemformula_tmpa_tl + { + \int_incr:N \l__chemformula_count_tokens_int + \int_compare:nTF + { \l__chemformula_count_tokens_int = \tl_count:N \l__chemformula_tmpa_tl } + { + \tl_if_eq:nnTF { ##1 } { + } + { + \tl_put_right:Nn #2 + { \chemformula_superscript:n { \chemformula_plus: } } + } + { + \tl_if_eq:nnTF { ##1 } { - } + { + \tl_put_right:Nn #2 + { \chemformula_superscript:n { \chemformula_minus: } } + } + { + \prop_get:NnNTF \l__chemformula_cmpd_prop { ##1 } \l__chemformula_tmpb_tl + { \tl_put_right:NV #2 \l__chemformula_tmpb_tl } + { \tl_put_right:Nn #2 { ##1 } } + } + } + } + { + \prop_get:NnNTF \l__chemformula_cmpd_prop { ##1 } \l__chemformula_tmpb_tl + { \tl_put_right:NV #2 \l__chemformula_tmpb_tl } + { \tl_put_right:Nn #2 { ##1 } } + } + } + \bool_if:NT \l__chemformula_kroegervink_bool + { + \tl_replace_all:Nnn #2 + { \chemformula_prime: } + { \chemformula_superscript:n { \chemformula_prime: } } + } + } + +% -------------------------------------------------------------------------- +% clean up chemmacros commands: +\cs_new_protected:Npn \__chemformula_clean_chemmacros:n #1 + { + \cs_set:Nn \chemmacros_text:n + { \mode_if_math:TF { \text { ##1 } } { ##1 } } + \cs_set:Npn \chemmacros_xspace: {} + } +\cs_generate_variant:Nn \__chemformula_clean_chemmacros:n { V } + +% -------------------------------------------------------------------------- +% input "and" sign +\cs_new_protected:Npn \chemformula_input_plus:n #1 + { + \tl_if_eq:nnT { #1 } { + } + { + \tl_put_right:Nn \l__chemformula_input_tl + { + \chemformula_skip_nobreak:N \l__chemformula_plus_space_skip + + + \chemformula_skip_nobreak_penalty:Nn + \l__chemformula_plus_space_skip + { \l__chemformula_plus_penalty_tl } + } + } + \tl_if_eq:nnT { #1 } { - } + { + \tl_put_right:Nn \l__chemformula_input_tl + { + \chemformula_skip_nobreak:N \l__chemformula_plus_space_skip + \c_math_toggle_token - \c_math_toggle_token + \chemformula_skip_nobreak_penalty:Nn + \l__chemformula_plus_space_skip + { \l__chemformula_plus_penalty_tl } + } + } + \bool_set_false:N \l__chemformula_is_plus_bool + } + +% -------------------------------------------------------------------------- +% input escaping gas +\cs_new_protected:Npn \chemformula_input_up:n #1 + { + \group_begin: + % ensure ^ has catcode 7 + % (else chemmacros wouldn't work with e.g. `breqn') + \__chemformula_sanitize:Nn \g__chemformula_input_up_tl { #1 } + \char_set_catcode_math_superscript:N \^ + \__chemformula_input_up:V \g__chemformula_input_up_tl + } + +\cs_new_protected:Npn \__chemformula_input_up:n #1 + { + \tl_gclear:N \g__chemformula_input_up_tl + \tl_if_eq:nnT { #1 } { ^ } + { + \tl_gset:Nn \g__chemformula_input_up_tl + { \c_math_toggle_token \uparrow \c_math_toggle_token } + } + \group_end: + \tl_put_right:NV \l__chemformula_input_tl \g__chemformula_input_up_tl + \bool_set_false:N \l__chemformula_is_up_bool + } +\cs_generate_variant:Nn \__chemformula_input_up:n { V } + +% -------------------------------------------------------------------------- +% input precipitate +\cs_new_protected:Npn \chemformula_input_down:n #1 + { + \tl_if_eq:nnT { #1 } { v } + { + \tl_put_right:Nn \l__chemformula_input_tl + { \c_math_toggle_token \downarrow \c_math_toggle_token } + } + \bool_set_false:N \l__chemformula_is_down_bool + } + +% -------------------------------------------------------------------------- +% input arrow +\cs_new_protected:Npn \chemformula_input_arrow:n #1 + { + \bool_if:nT + { + \l__chemformula_is_arrow_bool && + !\l__chemformula_first_last_text_bool && + !\l__chemformula_first_last_math_bool + } + { + \__chemformula_generate_arrows:Nn \l__chemformula_arrow_tmp_tl { #1 } + \tl_put_right:NV \l__chemformula_input_tl \l__chemformula_arrow_tmp_tl + } + \bool_set_false:N \l__chemformula_is_arrow_bool + } +\cs_generate_variant:Nn \chemformula_input_arrow:n { o,V } + +% -------------------------------------------------------------------------- +% input compound name +\cs_new_protected:Npn \chemformula_input_name:n #1 + { + \bool_if:nT + { + \l__chemformula_is_name_bool && + !\l__chemformula_first_last_text_bool && + !\l__chemformula_first_last_math_bool + } + { + \__chemformula_generate_name:Nn \l__chemformula_name_tmp_tl { #1 } + \tl_put_right:NV \l__chemformula_input_tl \l__chemformula_name_tmp_tl + } + \bool_set_false:N \l__chemformula_is_name_bool + } + +% -------------------------------------------------------------------------- +% input escaped text +% #1: <bool> #2: <tl> #3: <first> #4: <last> +\cs_new_protected:Npn \__chemformula_bool_set_if_first_last:Nnnn #1#2#3#4 + { + \int_zero:N \l__chemformula_tmpa_int + \int_zero:N \l__chemformula_tmpb_int + \int_set:Nn \l__chemformula_tmpa_int { \tl_count:n { #2 } } + \tl_map_inline:nn { #2 } + { + \int_incr:N \l__chemformula_tmpb_int + \int_compare:nT { \l__chemformula_tmpb_int = 1 } + { + \tl_if_eq:nnT { ##1 } { #3 } + { \bool_set_true:N #1 } + } + \int_compare:nT { \l__chemformula_tmpb_int = \l__chemformula_tmpa_int } + { + \tl_if_eq:nnF { ##1 } { #4 } + { \bool_set_false:N #1 } + } + } + } + +\cs_new_protected:Npn \chemformula_input_escape_text:n #1 + { + \__chemformula_first_last_text:n { #1 } + \bool_if:NT \l__chemformula_first_last_double_bool + { + \bool_set_true:N \l__chemformula_first_last_text_bool + \__chemformula_read_escape_double:w #1 \q_nil + } + \bool_if:NT \l__chemformula_first_last_single_bool + { + \bool_set_true:N \l__chemformula_first_last_text_bool + \__chemformula_read_escape_single:w #1 \q_nil + } + } +\cs_generate_variant:Nn \chemformula_input_escape_text:n { V } + +\cs_new_protected:Npn \__chemformula_read_escape_text:n #1 + { + \tl_set_rescan:Nnn \l__chemformula_tmpa_tl + { + \char_set_catcode_letter:N \_ + \char_set_catcode_other:N \: + + } + { #1 } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { \_ } { chemformulaplaceholder } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { _ } { \sb } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { chemformulaplaceholder } { \_ } + % TODO: waum ist das auskommentiert + % \__chemformula_reset:NV \l__chemformula_tmpa_tl \l__chemformula_tmpa_tl + \tl_put_right:NV \l__chemformula_input_tl \l__chemformula_tmpa_tl + } + +\cs_new:Npn \__chemformula_read_escape_double:w "#1" \q_nil + { \__chemformula_read_escape_text:n { #1 } } + +\cs_new:Npn \__chemformula_read_escape_single:w '#1' \q_nil + { \__chemformula_read_escape_text:n { #1 } } + +\cs_new_protected:Npn \__chemformula_first_last_text:n #1 + { + \bool_set_false:N \l__chemformula_first_last_double_bool + \bool_set_false:N \l__chemformula_first_last_single_bool + \bool_set_false:N \l__chemformula_first_last_text_bool + \__chemformula_bool_set_if_first_last:Nnnn + \l__chemformula_first_last_double_bool + { #1 } + { " } { " } + \bool_if:NF \l__chemformula_first_last_double_bool + { + \__chemformula_bool_set_if_first_last:Nnnn + \l__chemformula_first_last_single_bool + { #1 } + { ' } { ' } + } + } + +% -------------------------------------------------------------------------- +% input escaped math +\cs_new_protected:Npn \chemformula_input_escape_math:n #1 + { + \__chemformula_first_last_math:n { #1 } + \bool_if:NT \l__chemformula_first_last_dollar_bool + { + \bool_set_true:N \l__chemformula_first_last_math_bool + \__chemformula_read_escape_dollar:w #1 \q_nil + } + \bool_if:NT \l__chemformula_first_last_mathbraces_bool + { + \bool_set_true:N \l__chemformula_first_last_math_bool + \__chemformula_read_escape_mathbraces:w #1 \q_nil + } + } + +\cs_new_protected:Npn \__chemformula_read_escape_math:n #1 + { + \tl_set_rescan:Nnn \l__chemformula_tmpa_tl + { + \char_set_catcode_letter:N \_ + \char_set_catcode_letter:N \: + } + { \c_math_toggle_token #1 \c_math_toggle_token } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { \_ } { chemformulaplaceholder } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { _ } { \sb } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl + { chemformulaplaceholder } { \_ } + % \__chemformula_reset:NV \l__chemformula_tmpa_tl \l__chemformula_tmpa_tl + \tl_put_right:NV \l__chemformula_input_tl \l__chemformula_tmpa_tl + \tl_put_right:Nn \l__chemformula_input_tl + { \chemformula_skip_nobreak:N \l__chemformula_math_space_skip } + } + +\cs_new:Npn \__chemformula_read_escape_dollar:w $#1$ \q_nil + { \__chemformula_read_escape_math:n { #1 } } + +\cs_new:Npn \__chemformula_read_escape_mathbraces:w \(#1\) \q_nil + { \__chemformula_read_escape_math:n { #1 } } + +\cs_new_protected:Npn \__chemformula_first_last_math:n #1 + { + \bool_set_false:N \l__chemformula_first_last_math_bool + \bool_set_false:N \l__chemformula_first_last_dollar_bool + \bool_set_false:N \l__chemformula_first_last_mathbraces_bool + \__chemformula_bool_set_if_first_last:Nnnn + \l__chemformula_first_last_dollar_bool + { #1 } + { $ } { $ } + \bool_if:NF \l__chemformula_first_last_dollar_bool + { + \__chemformula_bool_set_if_first_last:Nnnn + \l__chemformula_first_last_mathbraces_bool + { #1 } + { \( } { \) } + } + } + +% -------------------------------------------------------------------------- +% customization of output other than arrows +\keys_define:nn { chemmacros / chemformula } + { + circled .choice: , + circled / none .code:n = + { \bool_set_false:N \l__chemformula_formal_charges_bool } , + circled / formal .code:n = + { \bool_set_false:N \l__chemformula_formal_charges_bool } , + circled / all .code:n = + { \bool_set_true:N \l__chemformula_formal_charges_bool } , + circled .default:n = all , + circletype .choice: , + circletype / math .code:n = + { \bool_set_false:N \l__chemformula_formal_chem_bool } , + circletype / chem .code:n = + { \bool_set_true:N \l__chemformula_formal_chem_bool } , + circletype .default:n = chem , + charge-hshift .code:n = + \tl_if_eq:nnTF { #1 } { full } + { \bool_set_true:N \l__chemformula_charge_full_shift_bool } + { + \bool_set_false:N \l__chemformula_charge_full_shift_bool + \dim_set:Nn \l__chemformula_charge_shift_dim { #1 } + } , + charge-hshift .default:n = .25em , + charge-vshift .tl_set:N = + \l__chemformula_superscript_shift_additional_tl , + charge-style .choice: , + charge-style / text .code:n = + \bool_set_false:N \l__chemformula_charge_style_math_bool , + charge-style / math .code:n = + \bool_set_true:N \l__chemformula_charge_style_math_bool , + subscript-vshift .tl_set:N = + \l__chemformula_subscript_shift_additional_tl , + subscript-vshift .default:n = 0pt , + subscript-style .choice: , + subscript-style / text .code:n = + \bool_set_false:N \l__chemformula_number_style_math_bool , + subscript-style / math .code:n = + \bool_set_true:N \l__chemformula_number_style_math_bool , + decimal-marker .tl_set:N = \l__chemformula_decimal_output_tl , + frac-style .choice: , + frac-style / math .code:n = + \bool_set_false:N \l__chemformula_xfrac_bool + \bool_set_false:N \l__chemformula_nicefrac_bool + \bool_set_true:N \l__chemformula_mathfrac_bool , + frac-style / xfrac .code:n = + \bool_set_true:N \l__chemformula_xfrac_bool + \bool_set_false:N \l__chemformula_nicefrac_bool + \bool_set_false:N \l__chemformula_mathfrac_bool , + frac-style / nicefrac .code:n = + \bool_set_false:N \l__chemformula_xfrac_bool + \bool_set_true:N \l__chemformula_nicefrac_bool + \bool_set_false:N \l__chemformula_mathfrac_bool , + frac-math-cmd .code:n = + { \cs_set_eq:NN \chemformula_math_frac:nn #1 } , + stoich-paren-parse .bool_set:N = \l__chemformula_stoich_parse_iupac_bool , + stoich-space .skip_set:N = \l__chemformula_stoich_space_skip , + stoich-print .code:n = + \cs_set_eq:NN \chemformula_print_stoich:n #1 , + adduct-space .dim_set:N = \l__chemformula_adduct_space_dim , + plus-space .skip_set:N = \l__chemformula_plus_space_skip , + plus-penalty .tl_set:N = \l__chemformula_plus_penalty_tl , + math-space .skip_set:N = \l__chemformula_math_space_skip , + name-format .tl_set:N = \l__chemformula_name_format_tl , + name-width .code:n = + { + \tl_if_eq:nnTF { #1 } { auto } + { \bool_set_false:N \l__chemformula_name_width_bool } + { + \bool_set_true:N \l__chemformula_name_width_bool + \dim_set:Nn \l__chemformula_name_dim { #1 } + } + } , + bond-length .dim_set:N = \l__chemformula_bond_dim , + bond-offset .dim_set:N = \l__chemformula_bond_space_dim , + bond-style .code:n = + \tikzset { chembond/.style={Butt~Cap-Butt~Cap,#1} } , + bond-penalty .tl_set:N = \l__chemformula_bond_penalty_tl , + font-family .code:n = + \bool_set_true:N \l__chemformula_fss_bool + \bool_set_false:N \l__chemformula_fontspec_bool + \bool_set_true:N \l__chemformula_fss_family_bool + \tl_set:Nn \l__chemformula_font_family_tl { #1 } , + font-series .code:n = + \bool_set_true:N \l__chemformula_fss_bool + \bool_set_false:N \l__chemformula_fontspec_bool + \bool_set_true:N \l__chemformula_fss_series_bool + \tl_set:Nn \l__chemformula_font_series_tl { #1 } , + font-shape .code:n = + \bool_set_true:N \l__chemformula_fss_bool + \bool_set_false:N \l__chemformula_fontspec_bool + \bool_set_true:N \l__chemformula_fss_shape_bool + \tl_set:Nn \l__chemformula_font_shape_tl { #1 } , + font-spec .code:n = + \bool_set_false:N \l__chemformula_fss_bool + \bool_set_true:N \l__chemformula_fontspec_bool + \__chemformula_fontspec:n { #1 } , + format .code:n = + \bool_set_false:N \l__chemformula_fss_bool + \bool_set_false:N \l__chemformula_fontspec_bool + \tl_set:Nn \l__chemformula_format_tl { #1 } + } + +% -------------------------------------------------------------------------- +% \chlewis[opions]{el spec}{atom} + +\keys_define:nn { chemmacros / chemformula } + { + lewis-default .tl_set:N = \l__chemformula_elspec_default_type_tl , + lewis-distance .dim_set:N = \l__chemformula_elspec_pair_distance_dim , + lewis-line-length .dim_set:N = \l__chemformula_elspec_pair_line_length_dim , + lewis-line-width .dim_set:N = \l__chemformula_elspec_pair_width_dim , + lewis-offset .tl_set:N = \l__chemformula_elspec_radius_tl + } + +% #1: options +% #2- el spec +% #3: atom +\cs_new_protected:Npn \chemformula_lewis:nnn #1#2#3 + { + \group_begin: + \keys_set:nn { chemmacros / chemformula } { #1 } + \int_gincr:N \g__chemformula_lewis_int + \chemformula_get_lewis_sequence:n { #2 } + \chemformula_tikz:nn { baseline } + { + \chemformula_node:nxn { anchor=base , inner~sep=0pt } + { chlewis-\int_use:N \g__chemformula_lewis_int } + { + \bool_if:NTF \l_chemformula_inside_ch_bool + { #3 } + { \chemformula_chcpd:nn {} { #3 } } + } + \seq_map_inline:Nn \l__chemformula_tmpa_seq + { \chemformula_lewis_get_angle_and_spec:n { ##1 } } + } + \group_end: + } + +\cs_new_protected:Npn \chemformula_get_lewis_sequence:n #1 + { + \tl_set:Nn \l__chemformula_tmpa_tl { #1 } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl { : } { \scan_stop: : , } + \tl_replace_all:NVn \l__chemformula_tmpa_tl \c_chemformula_colon_tl + { \scan_stop: : , } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl { . } { \scan_stop: . , } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl { | } { \scan_stop: | , } + \tl_replace_all:Nnn \l__chemformula_tmpa_tl { o } { \scan_stop: o , } + \seq_set_split:NnV \l__chemformula_tmpa_seq { , } \l__chemformula_tmpa_tl + } +\cs_generate_variant:Nn \tl_replace_all:Nnn { NV } + +\cs_new:Npn \chemformula_lewis_get_angle_and_spec:n #1 + { \__chemformula_lewis_get_angle_and_spec:w #1 \scan_stop: \scan_stop: \q_stop } + +\cs_new_protected:Npn + \__chemformula_lewis_get_angle_and_spec:w #1 \scan_stop: #2 \scan_stop: #3 \q_stop + { + \tl_if_blank:nF { #1 } + { + \tl_set:Nn \l__chemformula_elspec_angle_tl { #1 } + \tl_if_blank:nTF { #2 } + { + \tl_set_eq:NN + \l__chemformula_elspec_type_tl + \l__chemformula_elspec_default_type_tl + } + { \tl_set:Nn \l__chemformula_elspec_type_tl { #2 } } + \__chemformula_lewis_set_elspec_type:V \l__chemformula_elspec_type_tl + } + } + +\cs_new_protected:Npn \__chemformula_lewis_set_elspec_type:n #1 + { + \prop_get:NnNT \l__chemformula_lewis_elspec_types_prop { #1 } + \l__chemformula_tmpa_tl + { \tl_use:N \l__chemformula_tmpa_tl } + } +\cs_generate_variant:Nn \__chemformula_lewis_set_elspec_type:n { V } + +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { | } + { \__chemformula_lewis_elspec_pair_line: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { : } + { \__chemformula_lewis_elspec_pair_dots: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { . } + { \__chemformula_lewis_elspec_single: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { o } + { \__chemformula_lewis_elspec_empty: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { pair } + { \__chemformula_lewis_elspec_pair_dots: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { pair~(dotted) } + { \__chemformula_lewis_elspec_pair_dots: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { pair~(line) } + { \__chemformula_lewis_elspec_pair_line: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { single } + { \__chemformula_lewis_elspec_single: } +\prop_put:Nnn \l__chemformula_lewis_elspec_types_prop { empty } + { \__chemformula_lewis_elspec_empty: } + +\cs_new_protected:Npn \__chemformula_lewis_elspec_pair_dots: + { + \chemformula_draw:nn + { + fill, + inner~sep=0pt, + outer~sep=0pt + } + { + (node~cs \c_chemformula_colon_tl + name = chlewis-\int_use:N \g__chemformula_lewis_int , + angle = \l__chemformula_elspec_angle_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl + \c_chemformula_colon_tl + \l__chemformula_elspec_radius_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl +90 + \c_chemformula_colon_tl + .5\l__chemformula_elspec_pair_distance_dim + ) + circle (\l__chemformula_radical_radius_dim) + ++ + ( + \l__chemformula_elspec_angle_tl -90 + \c_chemformula_colon_tl + \l__chemformula_elspec_pair_distance_dim + ) + circle (\l__chemformula_radical_radius_dim) + } + } + +\cs_new_protected:Npn \__chemformula_lewis_elspec_pair_line: + { + \chemformula_draw:nn + { line~width = \l__chemformula_elspec_pair_width_dim } + { + (node~cs \c_chemformula_colon_tl + name = chlewis-\int_use:N \g__chemformula_lewis_int , + angle = \l__chemformula_elspec_angle_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl + \c_chemformula_colon_tl + \l__chemformula_elspec_radius_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl +90 + \c_chemformula_colon_tl + .5\l__chemformula_elspec_pair_line_length_dim + ) + -- + ++ + ( + \l__chemformula_elspec_angle_tl -90 + \c_chemformula_colon_tl + \l__chemformula_elspec_pair_line_length_dim + ) + } + } + +\cs_new_protected:Npn \__chemformula_lewis_elspec_single: + { + \chemformula_draw:nn + { + fill, + inner~sep=0pt, + outer~sep=0pt + } + { + (node~cs \c_chemformula_colon_tl + name = chlewis-\int_use:N \g__chemformula_lewis_int , + angle = \l__chemformula_elspec_angle_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl + \c_chemformula_colon_tl + \l__chemformula_elspec_radius_tl + ) + circle (\l__chemformula_radical_radius_dim) + } + } + +\cs_new_protected:Npn \__chemformula_lewis_elspec_empty: + { + \chemformula_draw:nn { } + { + (node~cs \c_chemformula_colon_tl + name = chlewis-\int_use:N \g__chemformula_lewis_int , + angle = \l__chemformula_elspec_angle_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl + \c_chemformula_colon_tl + \l__chemformula_elspec_radius_tl + ) + ++ + ( + \l__chemformula_elspec_angle_tl +90 + \c_chemformula_colon_tl + .5\l__chemformula_elspec_pair_line_length_dim + ) + coordinate (chlewis-tmp1) + ++ + ( + \l__chemformula_elspec_angle_tl -90 + \c_chemformula_colon_tl + \l__chemformula_elspec_pair_line_length_dim + ) + coordinate (chlewis-tmp2) + ++ + ( + \l__chemformula_elspec_angle_tl + \c_chemformula_colon_tl + .25\l__chemformula_elspec_pair_line_length_dim + ) + coordinate (chlewis-tmp3) + ++ + ( + \l__chemformula_elspec_angle_tl +90 + \c_chemformula_colon_tl + \l__chemformula_elspec_pair_line_length_dim + ) + coordinate (chlewis-tmp4) + (chlewis-tmp1) -- (chlewis-tmp2) -- + (chlewis-tmp3) -- (chlewis-tmp4) -- + cycle + } + } + +\NewDocumentCommand\chlewis{O{}mm} + { \chemformula_lewis:nnn { #1 } { #2 } { #3 } } + +% -------------------------------------------------------------------------- + +\NewDocumentCommand \setchemformula { m } + { \keys_set:nn { chemmacros / chemformula } { #1 } } + +\setchemformula{ + bond-style = {} , + arrow-style = {} +} + +% -------------------------------------------------------------------------- +% hyperref support +\AfterPackage* { hyperref } + { + \pdfstringdefDisableCommands + { + \cs_set:Npn \chcpd #1 { #1 } + \cs_set:Npn \charrow #1 { #1 } + \cs_set:Npn \chname (#1)(#2) { #2~(#1) } + \cs_set:Npn \ch #1 { #1 } + \cs_set:Npn \chlewis #1#2 { #2 } + } + } + +\tex_endinput:D + +% -------------------------------------------------------------------------- +VERSION HISTORY +2012/01/28 - version 3.0 - bundled with packages `chemmacros' and `ghs' +2012/01/30 - version 3.0a - bugfix + - renamed formula => chemformula + (following a request by Karl Berry for TeXlive) +2012/02/03 - version 3.0b - stepped number with `chemmacros' +2012/02/05 - version 3.0c - stepped number with `chemmacros' +2012/02/10 - version 3.0d - several bugfixes + - new arrow type <> +2012/02/19 - version 3.1 - new arrow types -/>, </- and <o> + - new commands \DeclareChemArrow, \RenewChemArrow and + \ShowChemArrow +2012/02/26 - version 3.1a - stepped number with `chemmacros' +2012/03/03 - version 3.1b - arrow types are stored in a sequence to automate the + search and replace in the right order + - new arrow type == + - IUPAC compliance for stoichiometric factors + - new handling of super- and subscripts to correct + various flaws: clear distinction between isotope and + formula + - new option charge-vshift +2012/03/14 - version 3.1c - improved arrow labels +2012/03/20 - version 3.2 - new: option input via @{<options>} +2012/05/07 - version 3.3 - \ch now bypasses \ref{}, \label{}, and \intertext{} +2012/05/13 - version 3.3a - stepped number with `chemmacros' +2012/05/18 - version 3.3b - stepped number with `chemmacros' +2012/05/18 - version 3.3c - stepped number with `chemmacros' +2012/07/24 - version 3.3d - stepped number with `chemmacros' + - default bond length set to 1.1667ex + - bug fix in the bonds +2012/08/21 - version 3.3e - stepped number with `chemmacros' +2012/09/11 - version 3.4 - cleaned a little, minor bug fixes + - switched to internal scratch variables + - new command \bond, more bond types + - new commands \DeclareChemBond, \DeclareChemBondAlias, + \RenewChemBond and \ShowChemBond + - radical point thicker, new options `radical-style' + and `radical-radius' +2012/10/03 - version 3.4a - stepped number with `chemmacros' +2013/01/04 - version 3.4b - bug fix in the sub- and superscript handling +2013/01/28 - version 3.5 - disallow breaks at bonds + - allow breaks after arrows + - made some spaces in chemformulas stretch- and + shrinkable + - various internal code improvements + - changed defaults for horizontal spaces that have in + set in ex into corresponding values in em. + - improvements to the placement of sub- and superscripts +2013/02/19 - version 3.5a - stepped number with `chemmacros' +2013/02/26 - version 3.6 - support for use with the `breqn' package + - math escaping also via \(\) + - internal: clearer escaping macros + - new options: `radical-vshift', `radical-hshift' + and `radical-space' + - bug fix: `radical-...' options are now correctly set + - stoichiometric factors: add leading 0 if missing + - new option: `stoich-paren-parse' + - internal changes: be way more rigid about protected + and expandable macros + - internal changes: clearer distinction between + private macros and accessable module macros + - internal changes: clearer distinction between + document commands and module level commands + - !()() syntax now also works with babel's French +2013/02/27 - version 3.6a - bug fix: escaped text and math stays escaped, i.e. + also arrow code like `<=>' +2013/04/19 - version 3.6b - new option `arrow-min-length' + - bug fix: stoichiometric fractions correctly displayed +2013/07/06 - version 4.0 - don't need `chemmacros' package any more, + `chemformula' can be used stand-alone; + this has lead to a few definitions that previously + were done by chemmacros; chemmacros will get them + now from chemformula when needed + - bug fix: allow braces in subscripts and superscripts + by disabling superfluous \chemformula_subscript:n + and \chemformula_superscript:n in the scripts write + commands + - remove superfluous rescanning at the begin of the + formula input; this is handled by the sanitize + command later anyway + - changed internal mathshifts from $ ... $ to \( ... \) + - removed superfluous \textstyle from math-frac + definition + - new command \charrow{}[][] that allows direct + access to chemformula's arrows + - new command \chname()() that allows direct access + to chemformula's naming + - new command \chcpd[]{} that allows typesetting a + simple single formula - also not nestable with \ch + - new command \setchemformula + - package option: `strict' + - don't allow a line break before a plus + (`chem-and') + - don't allow a line break between a stoichiometric + factor and a compound + - changed formal charges to match ``plain'' charges +2013/07/26 - version 4.0a - added options `arrow-penalty' (0), `plus-penalty' + (700) and `bond-penalty' (10000) that determine if + there may be a break after an arrow, a bond or the + plus +2013/08/24 - version 4.1 - changed `0' values in TikZ coordinates into `0pt' + see http://tex.stackexchange.com/q/128792/5049 and + http://tex.stackexchange.com/q/118467/5049 for + reference + - new option `tikz-external-disable' + - new option `frac-math-cmd' +2013/10/24 - version 4.2 - \chemformula_font_inner: is only applied /once/ to + a formula, and at the beginning, fixes + https://bitbucket.org/cgnieder/chemmacros/issue/23 + - fixed wrong setting of the TikZ bond style + - new option `arrow-style' + - new command \chlewis +2013/11/04 - version 4.2a - bug fix in \chcpd, + - change sanitizing/restoring of category codes +2014/01/24 - version 4.3 - changed behaviour of \DeclareChem to match + \DeclareRobustCommand, i.e., no check if command + is defined; added a \NewChem variant to each that + /does/ check; use \NewChem instead of \DeclareChem + for definitions + - new option stoich-print + - new command \chstoich +2014/01/29 - version 4.4 - treat a single `-' as a minus sign +2014/04/07 - version 4.5 - make sure that < and > have catcode 12 when read + as parts of arrows + - new arrow types `>=<', `>=<<', `>>=<' and `<==>' + - arrow lengths and compound offset now correctly + adapts to new fontsize if relative lengths (em,ex) + are used + - allow optional arguments to \\ in equation + environments + - allow optional arguments to \label in equation + environments + (credits: http://tex.stackexchange.com/a/166661/5049) + - support for Kröger-Vink notation +2014/06/30 - version 4.6 - fix: a comma in a superscript is typeset according + to `decimal-marker' again + - fix charge type behaviour: option `circled' and + `circletype' are now obeyed if the option is + changed mid-document + - new option `chemformula/circled' similar to + `chemmacros/circled' + - new option `chemformula/circletype' similar to + `chemmacros/circletype' +2014/08/04 - version 4.7 - change dependency: pgf library `arrows.meta' + instead of `arrows' + - new arrow tip definition allows redeclaration to + other existing tips by \pgfkeys{cf/.tip=<tip>} +2014/08/07 - version 4.8 - fix bug introduced in last update: `butt cap' now + needs to be `Butt Cap' with the new `arrows.meta' + library + - split from `chemmacros' bundle as independent + package + +% -------------------------------------------------------------------------- +% TODO +- Addukte: Zahlen nach * und . automatisch erkennen? +- make escaped text/math /truely/ escaped, i.e., behave as if it's been input + /outside/ of \ch |