mcf2graph (26jan20)

git-svn-id: svn://tug.org/texlive/trunk@53550 c570f23f-e606-0410-a88d-b1316a301751

10 files changed, 27 insertions, 442 deletions

diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG b/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG
index 0f6ac19e3d6..8b1de56bb8e 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/CHANGELOG
@@ -1,6 +1,10 @@
 *******************************************************************************
- Changelog of mcf2graph software package          by Akira Yamaji 2019-12-15
+ Changelog of mcf2graph software package          by Akira Yamaji 2020-01-26
 *******************************************************************************
+[ver. 4.48  / 2020-01-26]
+  -add command  a@#b : a:@,b:#
+  -update MCF manual
+
 [ver. 4.47  / 2019-12-15]
   -fix bug in fused ring
   -change option parameter name
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/README b/Master/texmf-dist/doc/metapost/mcf2graph/README
index 5f7bef71224..ad8fb31e05f 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/README
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/README
@@ -1,7 +1,7 @@
 ********************************************************************************
  mcf2graph  : Convert Molecular Coding Format to graphics with METAFONT/METAPOST
  Author     : Akira Yamaji
- version    : 4.47 2019-12-15
+ version    : 4.48 2020-01-26
  E-mail     : mcf2graph@gmail.com
  Located at : http://www.ctan.org/pkg/mcf2graph
 ********************************************************************************
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf
index c3ff7cce03c..6cf6e32e8b5 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_exa_soc.mf
@@ -1,16 +1,16 @@
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Molecular Coding Format for mcf_example.tex   by Akira Yamaji  2019.12.15
+% Molecular Coding Format for mcf_example.tex   by Akira Yamaji  2020.01.26
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-input mcf2graph.mf;   %%% it must be version 4.47 or later
+input mcf2graph.mf;   %%% it must be version 4.48 or later
 %-------------------------------------------------------------------------
 fsize:=(33mm,24mm);
 max_blength:=4.5mm;
 %-------------------------------------------------------------------------
-%%%%sw_aux_out:=1; % or 2
+%%%%sw_aux_out:=1;
 %%%%sw_fframe:=1;
 %%%%sw_aframe:=1;
 %%%%sw_mframe:=1;
-%%%% sw_expand:=1;
+%%%%sw_expand:=1;
 var3:="cal_FM";  tag3:="cFM";
 var4:="cal_MW";  tag4:="cMW";
 %%%% outputtemplate:="%3c-%j.png";
@@ -33,7 +33,7 @@ var4:="cal_MW";  tag4:="cMW";
 %%%%     for i=nA step nA until w: draw(i,0)--(i,h); endfor
 %%%%     for i=nA step nA until h: draw(0,i)--(w,i); endfor );
 %***************************************************************************
-beginfont("EN:Acetamiprid","MW:222.676","FM:C10H11ClN4")
+beginfont("EN:Acetamiprid","MW:222.676")
   MC(<30,Ph,2:N,1:/Cl,4:\,!,N,/_,!,/_,!!,N,!,CN)
 endfont
 %***************************************************************************
@@ -203,7 +203,7 @@ beginfont("EN:Ampicillin","MW:349.405")
 endfont
 %***************************************************************************
 beginfont("EN:Validamycin","MW:497.494")
-  MC(<30,?6,{5,6}:/OH,3:\,-60,OH,
+  MC(<30,?6,{5,6}:/OH,3:/!OH>vt,
     $4:\,O,-60,|,?6,2:O,{3,4,5}:/OH,6:/!OH,
     $1:\,NH,!,|,?6,2=dl,{4,5,6}:/OH,3:/!OH)
 endfont
@@ -398,14 +398,3 @@ beginfont("EN:Atoropin","MW:289.375")
 endfont
 %***************************************************************************
 bye
-*****
-bye
-*********************************
-beginfont("EN:Atoropin","MW:289.375")
-  MC(<-30,O,!,//O,!,!,Ph,
-     $1:\~zb^-120,|,?7`1.1,6:*\^190`1.25,N,/_,3~wb:#,$3:/!OH~wv)
-endfont
-%***************************************************************************
-bye
-*****
-bye
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf
index 495e5707ec5..51804c4cdc2 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_example.pdf
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps
index ff262231486..0820fc253f6 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc-064.mps
@@ -2,12 +2,14 @@
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 %%HiResBoundingBox: -0.1 -0.1 212.69804 56.79282 
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-%%CreationDate: 2019.06.19:0623
+%%CreationDate: 2020.01.25:0956
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+%%+ font uhvr8r cmr8
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-%%+ font JIZCCV-NimbusSanL-Regu IXTKJB-CMR8
+%%DocumentNeededResources: font uhvr8r cmr8
+%%IncludeResource: font uhvr8r
+%%IncludeResource: font cmr8
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-cleartomark
-{restore}if
-%%EndResource
 %%EndProlog
 %%BeginSetup
- /uhvr8r /JXDTPR-NimbusSanL-Regu def
- /cmr8 /GMTUEE-CMR8 def
+ /uhvr8r /uhvr8r def
+ /cmr8 /cmr8 def
 %%EndSetup
 %%Page: 1 1
  1 0 0 setrgbcolor
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf
index 10be0a74c88..a28d1df0afe 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_man_soc.mf
@@ -1,7 +1,7 @@
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Molecular Coding Format file for mcf_manual.tex  by Akira.Yamaji 2019.12.13
+% Molecular Coding Format file for mcf_manual.tex  by Akira.Yamaji 2020.01.26
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-input mcf2graph.mf;   %% it must be version 4.47 or later
+input mcf2graph.mf;   %% it must be version 4.48 or later
 %------------------------------------------------------------------------
 sw_mframe:=0;
 sw_expand:=0;
@@ -192,7 +192,7 @@ beginfont("EN:Connect atom")
   sw_numberA:=1;
   ratio_chain_ring:=1;
 %----------------------------------------------------------------------
-  MC(<30,!6,3:\,!,5~bd:#)
+  MC(<30,!6,3:\,!3,6:#~bd,9@#4~bz)
 endfont
 %***********************************************************************
 beginfont("EN:ring")
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf
index fa55769249c..b04218e18f6 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.pdf
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
index 6758b3cddb5..8ae6c125366 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
@@ -1,5 +1,5 @@
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-%  Molecular Coding Format manual                by  Akira Yamaji 2019.12.15
+%  Molecular Coding Format manual                by  Akira Yamaji 2020.01.26
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
 \documentclass[a4paper]{article}
 %%%%\documentclass[a4paper,twoside]{article}
@@ -192,8 +192,9 @@ pk font,PNG,SVG,EPS or MDL MOL file.
 \subsubsection{Connect atom}
 \begin{verbatim}
   n:# : Connect to An
+  n1@#n2 : n1:@,n2:#
 
-  <30,!6,3:\,!,5~bd:#
+  <30,!6,3:\,!3,6:#~bd,9@#4~bz
 \end{verbatim}
 \MCFgraph
 %-----------------------------------------------------------------------------
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf
index c284c2d563c..26fbaf0fcf4 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.pdf
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex
index 580d18b45fb..c458dadf7e2 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_mplib_exa.tex
@@ -1,7 +1,7 @@
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Example of  MCF typest with LuaLaTeX(luamplib)     by A.Yamaji    2019.12.15
+% Example of  MCF typest with LuaLaTeX(luamplib)     by A.Yamaji    2020.01.26
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-%%% mcf2graph.mf it must be version 4.47 or later
+%%% mcf2graph.mf it must be version 4.48 or later
 \documentclass{article}
 %------------------------------------------------------------------------------
 \usepackage{luamplib}%