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author | Karl Berry <karl@freefriends.org> | 2006-01-09 00:49:07 +0000 |
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committer | Karl Berry <karl@freefriends.org> | 2006-01-09 00:49:07 +0000 |
commit | 007f67a693e4d031fd3d792df8e4d5f43e2cb2e7 (patch) | |
tree | 90d17e00e572ecb1e24764b6f29c80e098b08d29 /Master/texmf-dist/doc/latex/kluwer/sampkluw.tex | |
parent | 950209b26f70aa87ed07c54f82a95b6f03b7c3a0 (diff) |
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diff --git a/Master/texmf-dist/doc/latex/kluwer/sampkluw.tex b/Master/texmf-dist/doc/latex/kluwer/sampkluw.tex new file mode 100644 index 00000000000..e12b203efce --- /dev/null +++ b/Master/texmf-dist/doc/latex/kluwer/sampkluw.tex @@ -0,0 +1,581 @@ +\documentclass{kluwer} % Specifies the document style. + +\newdisplay{guess}{Conjecture} + +\begin{document} +\begin{article} +\begin{opening} +\title{A Sample Document\thanks{Footnote + to the title with the `thanks' command.}} +\author{Leslie \surname{Lamport}} +\runningauthor{Leslie Lamport} +\runningtitle{A Sample Document} +\institute{Author's Affiliation} +\date{April 15, 1993} + +\begin{abstract} +This is a sample input file. Comparing it with the output it +generates can show you how to produce a simple document of +your own. +\end{abstract} +\keywords{sample, \LaTeX} + + +\end{opening} + +\section{Ordinary Text} + % Produces section heading. Lower-level + % sections are begun with similar + % \subsection and \subsubsection commands. + +The ends of words and sentences are marked + by spaces. It doesn't matter how many +spaces you type; one is as good as 100. The +end of a line counts as a space. + +One or more blank lines denote the end +of a paragraph. + +Since any number of consecutive spaces are treated like a single +one, the formatting of the input file makes no difference to + \TeX, % The \TeX command generates the TeX logo. +but it makes a difference to you. +When you use + \LaTeX, % The \LaTeX command generates the LaTeX logo. +making your input file as easy to read as possible +will be a great help as you write your document and when you +change it. This sample file shows how you can add comments to +your own input file. + +Because printing is different from typewriting, there are a +number of things that you have to do differently when preparing +an input file than if you were just typing the document directly. +Quotation marks like + ``this'' +have to be handled specially, as do quotes within quotes: + ``\,`this' % \, separates the double and single quote. + is what I just + wrote, not `that'\,''. + +Dashes come in three sizes: an + intra-word +dash, a medium dash for number ranges like + 1--2, +and a punctuation + dash---like +this. + +A sentence-ending space should be larger than the space between words +within a sentence. You sometimes have to type special commands in +conjunction with punctuation characters to get this right, as in the +following sentence. + Gnats, gnus, etc.\ % `\ ' makes an inter-word space. + all begin with G\@. % \@ marks end-of-sentence punctuation. +You should check the spaces after periods when reading your output to +make sure you haven't forgotten any special cases. +Generating an ellipsis + \ldots\ % `\ ' needed because TeX ignores spaces after + % command names like \ldots made from \ + letters. + % + % Note how a `%' character causes TeX to ignore the + % end of the input line, so these blank lines do not + % start a new paragraph. +with the right spacing around the periods +requires a special command. + +\TeX\ interprets some common characters as commands, so you must type +special commands to generate them. These characters include the +following: + \$ \& \% \# \{ and~\}. + +In printing, text is emphasized by using an + {\em italic\/} % The \/ command produces the tiny extra space that + % should be added between a slanted and a following + % unslanted letter. +type style. + +\begin{em} + A long segment of text can also be emphasized in this way. Text within + such a segment given additional emphasis + with\/ {\em Roman} + type. Italic type loses its ability to emphasize and become simply + distracting when used excessively. +\end{em} + +It is sometimes necessary to prevent \TeX\ from breaking a line where +it might otherwise do so. This may be at a space, as between the +``Mr.'' and ``Jones'' in + ``Mr.~Jones'', % ~ produces an unbreakable interword space. +or within a word---especially when the word is a symbol like + \mbox{\em itemnum\/} +that makes little sense when hyphenated across + lines. + + + + + +\TeX\ is good at typesetting mathematical formulas like + \( x-3y = 7 \) +or + \( a_{1} > x^{2n} / y^{2n} > x' \). +Remember that a letter like + $x$ % $ ... $ and \( ... \) are equivalent +is a formula when it denotes a mathematical symbol, and should +be treated as one. + + +\section{Notes} +Footnotes\footnote{This is an example of a footnote.} +pose no problem\footnote{And another one}. +Endnotes\endnote{This is an example of an endnote.} pose no +problem either\endnote{And another one.}. + +When using the {\sc kluwer} style file, you can produce endnotes +analogous to footnotes. Instead of the \LaTeX\ command \verb+\footnote{}+, +you can use \verb+\endnote{}+. The command \verb+\theendnotes+ can be used +to place the endnotes in the text. They will be put in a separate section in +the \verb+\footnotesize+ font. + + + +\section{Displayed Text} + +Text is displayed by indenting it from the left margin. +Quotations are commonly displayed. There are short quotations +\begin{quote} + This is a short a quotation. It consists of a + single paragraph of text. There is no paragraph + indentation. +\end{quote} +and longer ones. +\begin{quotation} + This is a longer quotation. It consists of two paragraphs + of text. The beginning of each paragraph is indicated + by an extra indentation. + + This is the second paragraph of the quotation. It is just + as dull as the first paragraph. +\end{quotation} +Another frequently-displayed structure is a list. +The following is an example of an {\em itemized} list, four levels deep. +\begin{itemize} +\item This is the first item of an itemized list. Each item + in the list is marked with a ``tick''. The document + style determines what kind of tick mark is used. +\item This is the second item of the list. It contains another + list nested inside it. The three inner lists are an {\em itemized} + list. + \begin{itemize} + \item This is the first item of an enumerated list that + is nested within the itemized list. + \item This is the second item of the inner list. \LaTeX\ + allows you to nest lists deeper than you really should. + \end{itemize} + This is the rest of the second item of the outer list. It + is no more interesting than any other part of the item. + \item This is the third item of the list. +\end{itemize} + + +The following is an example of an {\em enumerated} list, four levels deep. +\begin{enumerate} +\item This is the first item of an enumerated list. Each item + in the list is marked with a ``tick''. The document + style determines what kind of tick mark is used. +\item This is the second item of the list. It contains another + list nested inside it. The three inner lists are an {\em enumerated} + list. + \begin{enumerate} + \item This is the first item of an enumerated list that + is nested within the enumerated list. + \item This is the second item of the inner list. \LaTeX\ + allows you to nest lists deeper than you really should. + \end{enumerate} + This is the rest of the second item of the outer list. It + is no more interesting than any other part of the item. + \item This is the third item of the list. +\end{enumerate} + + +The following is an example of a {\em description} list. +\begin{description} +\item[Cow] Highly intelligent animal that can produce milk out of grass. +\item[Horse] Less intelligent animal renowned for its legs. +\item[Human being] Not so intelligent animal that thinks that it can think. +\end{description} + +You can even display poetry. +\begin{verse} + There is an environment for verse \\ % The \\ command separates lines + Whose features some poets will curse. % within a stanza. + + % One or more blank lines separate stanzas. + + For instead of making\\ + Them do {\em all\/} line breaking, \\ + It allows them to put too many words on a line when they'd + rather be forced to be terse. +\end{verse} + +Mathematical formulas may also be displayed. A displayed formula is +one-line long; multiline formulas require special formatting +instructions. + \[ x' + y^{2} = z_{i}^{2}\] +Don't start a paragraph with a displayed equation, nor make +one a paragraph by itself. + +Example of a theorem: + + +\begin{guess} +All conjectures are interesting, but some conjectures are more +interesting than others. +\end{guess} + + +\section{Tables and Figures} +Cross reference to labelled table: As you can see in Table~\ref{sphericcase} on +page~\pageref{sphericcase} and also in Table~\ref{parset} on page~\pageref{parset}. + + + + + +\begin{table} % +\begin{tabular}{lrl} +\hline +$Q_{s,\max}$ & [g/g DM h] & 0.18\\ +$K_{s}$ & [g/L] & 1.0\\ +$Y_{x/s}$ & [g DM/g] & 0.5\\ +$Y_{p/s}$ & [g/g] & 0.854\\ +$Q_{p,\max}$ & [g/g DM h] & 0.0045\\ +$\mu_{\rm crit}$ & [h$^{-1}$] & 0.01\\ +$k_{h}$ & [h$^{-1}$] & 0.002\\ +$m_{s}$ & [g/g DM h] & 0.025\\ +\hline +\end{tabular} +\caption[]{Parameter set used in the model of \shortcite{Bunt}}\label{parset} +\end{table} + +\begin{table*} +\caption[]{The spherical case ($I_1=0$, $I_2=0$).} +\label{sphericcase} +\begin{tabular}{crrrrc} +\hline +Equil. \\ +Points & \multicolumn{1}{c}{$x$} & \multicolumn{1}{c}{$y$} & \multicolumn{1}{c}{$z$} & \multicolumn{1}{c}{$C$} & +S \\ +\hline +$~~L_1$ & $-$2.485252241 & 0.000000000 & 0.017100631 & 8.230711648 & U \\ +$~~L_2$ & 0.000000000 & 0.000000000 & 3.068883732 & 0.000000000 & S \\ +$~~L_3$ & 0.009869059 & 0.000000000 & 4.756386544 & $-$0.000057922 & U \\ +$~~L_4$ & 0.210589855 & 0.000000000 & $-$0.007021459 & 9.440510897 & U \\ +$~~L_5$ & 0.455926604 & 0.000000000 & $-$0.212446624 & 7.586126667 & U \\ +$~~L_6$ & 0.667031314 & 0.000000000 & 0.529879957 & 3.497660052 & U \\ +$~~L_7$ & 2.164386674 & 0.000000000 & $-$0.169308438 & 6.866562449 & U \\ +$~~L_8$ & 0.560414471 & 0.421735658 & $-$0.093667445 & 9.241525367 & U \\ +$~~L_9$ & 0.560414471 & $-$0.421735658 & $-$0.093667445 & 9.241525367 & U +\\ +$~~L_{10}$ & 1.472523232 & 1.393484549 & $-$0.083801333 & 6.733436505 & U \\ +$~~L_{11}$ & 1.472523232 & $-$1.393484549 & $-$0.083801333 & 6.733436505 & U +\\ \hline +\end{tabular} +\end{table*} + + +A major +point of difference lies in the value of the specific production rate $\pi$ for +large values of the specific growth rate $\mu$. +Already in the early publications \cite{Falzon87} +it appeared that high glucose +concentrations in the production phase are well correlated with a +low penicillin yield (the +`glucose effect'). It has been confirmed recently +\cite{Bunt,Cahour-thesis,BrownAndBurton,Carr-Goldstein} +that +high glucose concentrations inhibit the synthesis of the enzymes of the +penicillin pathway, but not the actual penicillin biosynthesis. +In other words, glucose represses (and not inhibits) the penicillin +biosynthesis. + +These findings do not contradict the results of +\citeauthor{Chin88-book} (on which \shortcite{Bunt} based their +production kinetics) and of \citeyear{ChinThesis} which were obtained for +continuous culture fermentations. +Because for high values of the specific +growth rate $\mu$ it is most likely (as shall be discussed below) that +maintenance metabolism occurs, it can be shown that +in steady state continuous culture conditions, and with $\mu$ described by a Monod kinetics +\begin{equation} + C_{s} = K_{M} \frac{\mu/\mu_{x}}{1-\mu/\mu_{x}} \label{cs} +\end{equation} +Pirt \& Rhigelato determined $\pi$ for $\mu$ between +$0.023$ and $0.086$ h$^{-1}$. +They also reported a value $\mu_{x} \approx 0.095$ +h$^{-1}$, so that for their experiments $\mu/\mu_{x}$ is in the range +of $0.24$ to $0.9$. +Substituting $K _M$ in Eq. (\ref{cs}) by +the value $K_{M}=1$ g/L as used by \cite{Bunt}, one finds +with the above equation $0.3 < C_{s} < 9$ g/L. This agrees well with +the work of \shortcite{Bunt}, who reported that penicillin biosynthesis +repression only occurs at glucose concentrations from $C_{s}=10$ g/L on. +The conclusion is that the glucose concentrations in the experiments of +Pirt \& Rhigelato probably were too low for glucose repression to be +detected. The experimental data published by Ryu \& Hospodka +are not detailed sufficiently to permit a similar analysis. + + + +\begin{table} +\caption[]{Parameter sets used by Bajpai \& Reu\ss\ } +\begin{tabular}{lrll} +\hline +\multicolumn{2}{l}{\it parameter} & {\it Set 1} & {\it Set 2}\\ +\hline +$\mu_{x}$ & [h$^{-1}$] & 0.092 & 0.11 \\ +$K_{x}$ & [g/g DM] & 0.15 & 0.006 \\ +$\mu_{p}$ & [g/g DM h] & 0.005 & 0.004 \\ +$K_{p}$ & [g/L] & 0.0002 & 0.0001 \\ +$K_{i}$ & [g/L] & 0.1 & 0.1 \\ +$Y_{x/s}$ & [g DM/g] & 0.45 & 0.47 \\ +$Y_{p/s}$ & [g/g] & 0.9 & 1.2 \\ +$k_{h}$ & [h$^{-1}$] & 0.04 & 0.01 \\ +$m_{s}$ & [g/g DM h] & 0.014 & 0.029 \\ +\hline +\end{tabular} +\end{table} + +Bajpai \& Reu\ss\ decided to disregard the +differences between time constants for the two regulation mechanisms +(glucose repression or inhibition) because of the +relatively very long fermentation times, and therefore proposed a Haldane +expression for $\pi$. + +It is interesting that simulations with the \cite{Bunt} model for the +initial conditions given by these authors indicate that, when the +remaining substrate is fed at a constant rate, a considerable and +unrealistic amount of penicillin is +produced when the glucose concentration is still very high \cite{CarberryCL88} +Simulations with the Bajpai \& Reu\ss\ model correctly predict almost +no penicillin production in similar conditions. + + +The maintenance coefficient used by \cite{Bunt} +($m_{s}=0.025$ g/g DM h) corresponds well to +the value $m_{s}=0.029$ g/g DM h (Set 2 of \cite{BuchananRBES}), to the +value $m_{s}=0.024$ g/g DM h reported by \citeauthor{MMI2-d3}, and to the +value used by \shortcite{CawseyIJMMS} ($m_{s}=0.022$ g/g DM h) (1983). +However, these values differ from the value in Set 1 of +\cite{BuchananRBES} ($m_{s}=0.014$ g/g DM h). +It is not clear where this difference originated from. +Simulations indicated that the dynamic behaviour of the model is rather +sensitive with respect to the value of $m_{s}$. + +In the model van \shortcite{Bunt}, at severe substrate limitation conditions, and thus most probably corresponding +to endogenous metabolic behaviour, the biomass consumption due to maintenance +and production requirements may exceed the conversion of substrate into +biomass and $\mu$ eventually may become negative. This situation may occur at +the end of the growth phase during a fed-batch fermentation. +For these conditions $\pi$ is not defined. A +straightforward extension of the $\pi(\mu)$ kinetics (10) +could be $\pi(\mu \leq 0)=0$, but there +are some biochemical indications that +the penicillin biosynthesis actually does not stop in that case. + +\begin{figure} % figuur 1 +\vspace{6pc} +\caption[]{Pathway of the penicillin G biosynthesis.} +\label{penG} +\end{figure} + +Sample of cross-reference to figure. +Figure~\ref{penG} shows that is not easy to get something on paper. + + + +\section{Headings} + +\subsection{Subsection} +based their model on balancing methods and +biochemical know\-ledge. The original model (1980) contained an equation for the +oxygen dynamics which has been omitted in a second paper +(1981). This simplified model shall be discussed here. + +\subsubsection{Subsubsection} +\cite{Carr-Goldstein,Cohen-Jones88-book} +based their model on balancing methods and +biochemical know\-ledge. The original model (1980) contained an equation for the +oxygen dynamics which has been omitted in a second paper +(1981). This simplified model shall be discussed here. + +\paragraph{Paragraph.} +\cite{Carr-Goldstein,Cohen-Jones88-book} +based their model on balancing methods and +biochemical know\-ledge. The original model (1980) contained an equation for the +oxygen dynamics which has been omitted in a second paper +(1981). This simplified model shall be discussed here. + +\subparagraph{Subparagraph.} +\cite{Carr-Goldstein,Cohen-Jones88-book} +based their model on balancing methods and +biochemical know\-ledge. The original model (1980) contained an equation for the +oxygen dynamics which has been omitted in a second paper +(1981). This simplified model shall be discussed here. + + + +\section{Equations and the Like} + +Two equations: +\begin{equation} + C_{s} = K_{M} \frac{\mu/\mu_{x}}{1-\mu/\mu_{x}} \label{ccs} +\end{equation} + +and + +\begin{equation} + G = \frac{P_{\rm opt} - P_{\rm ref}}{P_{\rm ref}} \mbox{\ }100 \mbox{\ }(\%) +\end{equation} + +Two equation arrays: + +\begin{eqnarray} + \frac{dS}{dt} & = & - \sigma X + s_{F} F\\ + \frac{dX}{dt} & = & \mu X\\ + \frac{dP}{dt} & = & \pi X - k_{h} P\\ + \frac{dV}{dt} & = & F +\end{eqnarray} + +and, + +\begin{eqnarray} + \mu_{\rm substr} & = & \mu_{x} \frac{C_{s}}{K_{x}C_{x}+C_{s}} \\ + \mu & = & \mu_{\rm substr} - Y_{x/s}(1-H(C_{s}))(m_{s}+\pi /Y_{p/s}) \\ + \sigma & = & \mu_{\rm substr}/Y_{x/s}+ H(C_{s}) (m_{s}+ \pi /Y_{p/s}) +\end{eqnarray} + + +\section{References in the THEBIBLIOGRAPHY Environment} +The first reference in the list below has the key \{BrownAndBurton\}. +Together with the bibitem option $\backslash$citeauthoryear\{Brown and +Burton\}\{1978\} the follwing cross-references can be used:\\ +$\backslash$cite\{BrownAndBurton\} produces: \cite{BrownAndBurton}\\ +$\backslash$shortcite\{BrownAndBurton\} produces: \shortcite{BrownAndBurton}\\ +$\backslash$citeauthor\{BrownAndBurton\} produces: \citeauthor{BrownAndBurton}\\ +$\backslash$citeyear\{BrownAndBurton\} produces: \citeyear{BrownAndBurton}\\ + + +\appendix + +And this is my Appendix. + + +\acknowledgements +And this is an acknowledgements section with a heading that was produced by the +$\backslash$acknowledgements command. Thank you all for helping me writing this +\LaTeX\ sample file. + +% The endnotes section will be placed here. + +\theendnotes + +\begin{thebibliography}{} + +\bibitem[\protect\citeauthoryear{Brown and Burton}{1978}]{BrownAndBurton} +Brown, J.~S. and R.~R. Burton. +\newblock {Diagnostic Models for Procedural Bugs in Basic Mathematical Skills}. +\newblock {\em Cognitive Science}, 2(2):155--192, 1978. + +\bibitem[\protect\citeauthoryear{Buchanan}{1984}]{BuchananRBES} +Buchanan, B.~G. and E.~H. Shortliffe. +\newblock {\em Rule-Based Expert Systems: The MYCIN Experiments of the Stanford + Heuristic Programming Project}. +\newblock Addison-Wesley Publishing Company, 1984. + +\bibitem[\protect\citeauthoryear{Bunt}{1990}]{Bunt} +Bunt, H.~C. +\newblock {Modular Incremental Modelling of Belief and Intention}. +\newblock In {\em Proceedings of the Second International Workshop on User + Modeling}, 1990. + +\bibitem[\protect\citeauthoryear{Cahour}{1990}]{Cahour-90-Montreal} +Cahour, B. +\newblock {Competence Modelling in Consultation Dialogs}. +\newblock In L.~Berlinguet and D.~Berthelette, editors, {\em Proceedings of the + International Congress, Work With Dispay Units' 89}, Montreal, Canada, + September 1990. North Holland, Amsterdam. + +\bibitem[\protect\citeauthoryear{Cahour}{1988}]{Cahour-thesis} +Cahour, B. +\newblock {\em {La Mod\'elisation de l'Interlocuteur: Elaboration du Mod\`ele + et Effets au Cours de Dialogues de Consultation}}. +\newblock PhD thesis, Universit\'e Paris 8, France, 1991. +\newblock Cognitive psychology PhD. + +\bibitem[\protect\citeauthoryear{Carberry}{1988}]{CarberryCL88} +Carberry, S.~M. +\newblock {Modeling the User's Plans and Goals}. +\newblock {\em Computational Linguistics}, 14(3):23--37, September 1988. + +\bibitem[\protect\citeauthoryear{Carbonell}{1970}]{CarbonellScholar} +Carbonell, J.~R. +\newblock {AI in CAI: An Artificial Intelligence Approach to Computer-Aided + Instruction}. +\newblock {\em IEEE Transactions on Man-Machine Systems}, 11:190--202, 1970. + +\bibitem[\protect\citeauthoryear{Carr and Goldstein}{1977}]{Carr-Goldstein} +Carr, B. and I.~Goldstein. +\newblock {Overlays: A Theory of Modelling for Computed Aided Instruction}. +\newblock AI Memo 406, 1977. + +\bibitem[\protect\citeauthoryear{Cawsey}{(in press)}]{CawseyIJMMS} +Cawsey, A. +\newblock {Planning Interactive Explanations}. +\newblock {\em International Journal of Man-Machine Studies}, in press. + +\bibitem[\protect\citeauthoryear{Chandrasekaran and Swartout}{1991}]{chandra-swartout} +Chandrasekaran, B. and William Swartout. +\newblock {Explanations in Knowledge Systems: The Role of Explicit + Representation of Design Knowledge}. +\newblock {\em IEEE Expert}, 6(3):47--50, June 1991. + +\bibitem[\protect\citeauthoryear{Chappel and Cahour}{1991}]{MMI2-d3} +Chappel, H. and B. Cahour. +\newblock {User Modeling for Multi-Modal Co-Operative Dialogue with KBS}. +\newblock Deliverable D3, Esprit Project P2474, 1991. + +\bibitem[\protect\citeauthoryear{Chin}{1987}]{ChinThesis} +Chin, D.~N. +\newblock {\em Intelligent Agents as a Basis for Natural Language Interfaces}. +\newblock PhD thesis, University of California at Berkeley, 1987. + +\bibitem[\protect\citeauthoryear{Chin}{1989}]{Chin88-book} +Chin, D.~N. +\newblock {KNOME}: {M}odeling {W}hat the {U}ser {K}nows in {UC}. +\newblock In Alfred Kobsa and Wolfgang Wahlster, editors, {\em User Models in + Dialog Systems}. Springer-Verlag, Symbolic Computation Series, Berlin + Heidelberg New York Tokyo, 1989. + +\bibitem[\protect\citeauthoryear{Cohen and Jones}{1989}]{Cohen-Jones88-book} +Cohen, R. and M. Jones. +\newblock {Incorporating User Models into Expert Systems for Educational + Diagnosis}. +\newblock In Alfred Kobsa and Wolfgang Wahlster, editors, {\em User Models in + Dialog Systems}, pages 35 -- 51. Springer-Verlag, Symbolic Computation + Series, Berlin Heidelberg New York Tokyo, 1989. + +\bibitem[\protect\citeauthoryear{Falzon}{1987}]{Falzon87} +Falzon, P. +\newblock {Les Dialogues de Diagnostic: L'\'evaluation des Connaissances de + l'Interlocuteur}. +\newblock Technical Report 747, INRIA, Rocquencourt, France, 1987. + +\bibitem[\protect\citeauthoryear{Finin et al.}{1986}]{FininJoshiWebber} +Finin, T.~W., A.~K. Joshi, and B.~L. Webber. +\newblock {Natural Language Interactions with Artificial Experts}. +\newblock {\em Proceedings of the IEEE}, 74(7), July 1986. + +\end{thebibliography} +\end{article} +\end{document} |