From e3813f8109b2a1a704ec02898a96bb15aef566ab Mon Sep 17 00:00:00 2001 From: Karl Berry Date: Fri, 22 Jun 2007 17:44:35 +0000 Subject: texshade update git-svn-id: svn://tug.org/texlive/trunk@4493 c570f23f-e606-0410-a88d-b1316a301751 --- Master/texmf-dist/tex/latex/texshade/texshade.def | 10 + Master/texmf-dist/tex/latex/texshade/texshade.sty | 352 ++++++++++++++++++++-- 2 files changed, 332 insertions(+), 30 deletions(-) (limited to 'Master/texmf-dist/tex/latex/texshade') diff --git a/Master/texmf-dist/tex/latex/texshade/texshade.def b/Master/texmf-dist/tex/latex/texshade/texshade.def index b9c55582a77..2de06346a09 100644 --- a/Master/texmf-dist/tex/latex/texshade/texshade.def +++ b/Master/texmf-dist/tex/latex/texshade/texshade.def @@ -35,6 +35,8 @@ \numberingcolor{Black} % Numbering color is `Black' \shownumbering{right} % Show sequence numbering on the left \namescolor{Black} % Names' color is `Black' +\featurenamescolor{Black} % Feature names' color is `Black' +\featurestylenamescolor{Black} % Feature names' color is `Black' \shownames{left} % Show sequence names on the right \consensuscolors{Black}{White} % All consensus symbols/letters {Black}{White} % appear `Black on White' @@ -75,6 +77,14 @@ \setseries{names}{md} % Use normal series for names \setshape {names}{up} % Use upright shape for names \setsize {names}{normalsize} % Use normal size for names +\setfamily{featurenames}{tt} % Use typewriter family for feature names +\setseries{featurenames}{md} % Use normal series for feature names +\setshape {featurenames}{up} % Use upright shape for feature names +\setsize {featurenames}{normalsize}% Use normal size for feature names +\setfamily{featurestylenames}{tt} % Use typewriter family for feature style names +\setseries{featurestylenames}{md} % Use normal series for feature style names +\setshape {featurestylenames}{up} % Use upright shape for feature style names +\setsize {featurestylenames}{normalsize}% Use normal size for feature style names \setfamily{features}{rm} % Use roman family for feature texts \setseries{features}{md} % Use normal series for feature texts \setshape {features}{it} % Use italics shape for feature texts diff --git a/Master/texmf-dist/tex/latex/texshade/texshade.sty b/Master/texmf-dist/tex/latex/texshade/texshade.sty index 792807ef473..77a390d1fc3 100644 --- a/Master/texmf-dist/tex/latex/texshade/texshade.sty +++ b/Master/texmf-dist/tex/latex/texshade/texshade.sty @@ -13,8 +13,8 @@ %% \NeedsTeXFormat{LaTeX2e} -\ProvidesPackage{texshade}[2007/02/18 LaTeX TeXshade (v1.16)] -\message{Package `texshade', Version 1.16 of 2007/02/18.} +\ProvidesPackage{texshade}[2007/06/19 LaTeX TeXshade (v1.17)] +\message{Package `texshade', Version 1.17 of 2007/06/19.} \PassOptionsToPackage{dvips}{color} \PassOptionsToPackage{dvips}{graphicx} @@ -4027,6 +4027,12 @@ \fi\fi\fi \fi } +\def\showfeaturename#1#2{\expandafter\xdef\csname featuretextn@me#1\endcsname{#2}} +\def\showfeaturestylename#1#2{\expandafter\xdef\csname featurestylesn@me#1\endcsname{#2}} +\def\hidefeaturename#1{\expandafter\xdef\csname featuretextn@me#1\endcsname{}} +\def\hidefeaturenames{\xdef\featuretextn@mettop{}\xdef\featuretextn@metop{}\xdef\featuretextn@mebottom{}\xdef\featuretextn@mebbottom{}} +\def\hidefeaturestylename#1{\expandafter\xdef\csname featurestylesn@me#1\endcsname{}} +\def\hidefeaturestylenames{\xdef\featurestylesn@mettop{}\xdef\featurestylesn@metop{}\xdef\featurestylesn@mebottom{}\xdef\featurestylesn@mebbottom{}} \def\seqtype#1{\xdef\seq@type{#1} \if\seq@type P \xdef\prefix@{pep} \else \if\seq@type p \xdef\seq@type{P} \xdef\prefix@{pep} @@ -4036,7 +4042,21 @@ \xdef\first@{#1} \ifletter \get@name@number \fi \expandafter\xdef\csname newseqname\first@\endcsname{#2} } -\def\threshold#1{\xdef\thresh@ld{#1}} +\newcommand\threshold[2][n]{% + \xdef\first@{#1} + \ifx\first@\n@ + \xdef\thresh@ld{#2} + \else + \all@shadetrue + \ifnum\first@>#2 + \xdef\thresh@ld{#2} + \xdef\all@thresh@ld{#1} + \else + \xdef\thresh@ld{#1} + \xdef\all@thresh@ld{#2} + \fi + \fi +} \def\constosingleseq#1{% \xdef\first@{#1 @} \expandafter\check@letter\first@ \xdef\first@{#1} \ifletter \get@name@number \fi @@ -4096,20 +4116,45 @@ \xdef\seq@gap@num{\the\loopcount} \fi \fi} -\newcommand{\shadingmode}[2][1]{% +\newcommand{\shadingmode}[2][-1]{% \xdef\last@{#2} \xdef\first@{identical} - \all@shadefalse \ifx\first@\last@ \simmodefalse \funcmodefalse - \xdef\last@{#1} \xdef\second@{allmatchspecial} - \ifx\second@\last@ \all@shadetrue \fi + \xdef\second@{#1 @} \expandafter\check@letter\second@ + \ifnumber \all@shadetrue + \ifnum#1<0 \all@shadefalse + \else + \ifnum#1>100 \xdef\all@thresh@ld{100} + \else + \xdef\all@thresh@ld{#1} + \fi\fi + \else + \xdef\last@{#1} + \xdef\first@{allmatchspecial} + \ifx\last@\first@ + \xdef\all@thresh@ld{100} \all@shadetrue + \fi + \fi \else \xdef\first@{similar} \ifx\first@\last@ \simmodetrue \funcmodefalse - \xdef\last@{#1} \xdef\second@{allmatchspecial} - \ifx\second@\last@ \all@shadetrue \fi + \xdef\second@{#1 @} \expandafter\check@letter\second@ + \ifnumber \all@shadetrue + \ifnum#1<0 \all@shadefalse + \else + \ifnum#1>100 \xdef\all@thresh@ld{100} + \else + \xdef\all@thresh@ld{#1} + \fi\fi + \else + \xdef\last@{#1} + \xdef\first@{allmatchspecial} + \ifx\last@\first@ + \xdef\all@thresh@ld{100} \all@shadetrue + \fi + \fi \else \xdef\first@{functional} \ifx\first@\last@ @@ -4136,7 +4181,16 @@ \message{} \simmodetrue \funcmodefalse \fi\fi\fi\fi} -\def\allmatchspecial{\all@shadetrue} +\newcommand\allmatchspecial[1][100]{% + \ifnum#1<0 + \xdef\all@thresh@ld{0} + \else + \ifnum#1>100 + \xdef\all@thresh@ld{100} + \else + \xdef\all@thresh@ld{#1} + \fi\fi + \all@shadetrue} \def\allmatchspecialoff{\all@shadefalse} \def\gapchar#1{% \xdef\first@{rule}\xdef\second@{#1} @@ -4589,6 +4643,12 @@ \else \xdef\third@{\second@} \fi\fi\fi + \xdef\temp@{featurenames} + \ifx\first@\temp@ \xdef\ftext@family{\third@} + \else + \xdef\temp@{featurestylenames} + \ifx\first@\temp@ \xdef\fstyles@family{\third@} + \else \xdef\temp@{features} \ifx\first@\temp@ \xdef\featuretext@family{\third@} \else @@ -4618,6 +4678,8 @@ \else \xdef\temp@{all} \ifx\first@\temp@ + \xdef\ftext@family{\third@} + \xdef\fstyles@family{\third@} \xdef\featuretext@family{\third@} \xdef\featurestyles@family{\third@} \xdef\numbertext@family{\third@} @@ -4627,7 +4689,7 @@ \xdef\label@family{\third@} \xdef\hideblock@family{\third@} \xdef\ruler@family{\second@} - \fi\fi\fi\fi\fi\fi\fi\fi\fi\fi + \fi\fi\fi\fi\fi\fi\fi\fi\fi\fi\fi\fi \fi } \def\setseries#1#2{% @@ -4646,6 +4708,12 @@ \else \xdef\third@{\second@} \fi\fi + \xdef\temp@{featurenames} + \ifx\first@\temp@ \xdef\ftext@series{\third@} + \else + \xdef\temp@{featurestylenames} + \ifx\first@\temp@ \xdef\fstyles@series{\third@} + \else \xdef\temp@{features} \ifx\first@\temp@ \xdef\featuretext@series{\third@} \else @@ -4672,6 +4740,8 @@ \else \xdef\temp@{all} \ifx\first@\temp@ + \xdef\ftext@series{\third@} + \xdef\fstyles@series{\third@} \xdef\featuretext@series{\third@} \xdef\featurestyles@series{\third@} \xdef\numbertext@series{\third@} @@ -4680,7 +4750,7 @@ \xdef\legend@series{\third@} \xdef\hideblock@series{\third@} \xdef\label@series{\third@} - \fi\fi\fi\fi\fi\fi\fi\fi\fi + \fi\fi\fi\fi\fi\fi\fi\fi\fi\fi\fi \fi } \def\setshape#1#2{% @@ -4707,6 +4777,12 @@ \else \xdef\third@{\second@} \fi\fi\fi\fi + \xdef\temp@{featurenames} + \ifx\first@\temp@ \xdef\ftext@shape{\third@} + \else + \xdef\temp@{featurestylenames} + \ifx\first@\temp@ \xdef\fstyles@shape{\third@} + \else \xdef\temp@{features} \ifx\first@\temp@ \xdef\featuretext@shape{\third@} \else @@ -4733,6 +4809,8 @@ \else \xdef\temp@{all} \ifx\first@\temp@ + \xdef\ftext@shape{\third@} + \xdef\fstyles@shape{\third@} \xdef\featuretext@shape{\third@} \xdef\featurestyles@shape{\third@} \xdef\numbertext@shape{\third@} @@ -4741,7 +4819,7 @@ \xdef\legend@shape{\third@} \xdef\hideblock@shape{\third@} \xdef\label@shape{\third@} - \fi\fi\fi\fi\fi\fi\fi\fi\fi + \fi\fi\fi\fi\fi\fi\fi\fi\fi\fi\fi \fi } \def\setsize#1#2{% @@ -4757,6 +4835,14 @@ \ifx\first@\temp@ \def\featurestyles@size{\csname #2\endcsname} \else + \xdef\temp@{featurenames} + \ifx\first@\temp@ + \def\ftext@size{\csname #2\endcsname} + \else + \xdef\temp@{featurestylenames} + \ifx\first@\temp@ + \def\fstyles@size{\csname #2\endcsname} + \else \xdef\temp@{numbering} \ifx\first@\temp@ \def\numbertext@size{\csname #2\endcsname} @@ -4796,6 +4882,8 @@ \ifx\first@\temp@ \def\featuretext@size{\csname #2\endcsname} \def\featurestyles@size{\csname #2\endcsname} + \def\ftext@size{\csname #2\endcsname} + \def\fstyles@size{\csname #2\endcsname} \def\numbertext@size{\csname #2\endcsname} \def\namestext@size{\csname #2\endcsname} \def\legend@size{\csname #2\endcsname} @@ -4803,7 +4891,7 @@ \def\label@size{\csname #2\endcsname} \def\residues@size{\csname #2\endcsname} \xdef\res@size{#2} - \fi\fi\fi\fi\fi\fi\fi\fi\fi + \fi\fi\fi\fi\fi\fi\fi\fi\fi\fi\fi \xdef\temp@{Huge} \ifx\temp@\res@size \def\bottomruler@size{\csname Large\endcsname} @@ -4835,6 +4923,44 @@ \def\setfont#1#2#3#4#5{% \setfamily{#1}{#2}\setseries{#1}{#3} \setshape{#1}{#4}\setsize{#1}{#5}} +\def\featurenamesrm{\setfamily{featurenames}{rm}} +\def\featurenamessf{\setfamily{featurenames}{sf}} +\def\featurenamestt{\setfamily{featurenames}{tt}} +\def\featurenamesmd{\setseries{featurenames}{md}} +\def\featurenamesbf{\setseries{featurenames}{bf}} +\def\featurenamesup{\setshape {featurenames}{up}} +\def\featurenamesit{\setshape {featurenames}{it}} +\def\featurenamessl{\setshape {featurenames}{sl}} +\def\featurenamessc{\setshape {featurenames}{sc}} +\def\featurenamestiny {\setsize{featurenames}{tiny}} +\def\featurenamesscriptsize {\setsize{featurenames}{scriptsize}} +\def\featurenamesfootnotesize{\setsize{featurenames}{footnotesize}} +\def\featurenamessmall {\setsize{featurenames}{small}} +\def\featurenamesnormalsize {\setsize{featurenames}{normalsize}} +\def\featurenameslarge {\setsize{featurenames}{large}} +\def\featurenamesLarge {\setsize{featurenames}{Large}} +\def\featurenamesLARGE {\setsize{featurenames}{LARGE}} +\def\featurenameshuge {\setsize{featurenames}{huge}} +\def\featurenamesHuge {\setsize{featurenames}{Huge}} +\def\featurestylenamesrm{\setfamily{featurestylenames}{rm}} +\def\featurestylenamessf{\setfamily{featurestylenames}{sf}} +\def\featurestylenamestt{\setfamily{featurestylenames}{tt}} +\def\featurestylenamesmd{\setseries{featurestylenames}{md}} +\def\featurestylenamesbf{\setseries{featurestylenames}{bf}} +\def\featurestylenamesup{\setshape {featurestylenames}{up}} +\def\featurestylenamesit{\setshape {featurestylenames}{it}} +\def\featurestylenamessl{\setshape {featurestylenames}{sl}} +\def\featurestylenamessc{\setshape {featurestylenames}{sc}} +\def\featurestylenamestiny {\setsize{featurestylenames}{tiny}} +\def\featurestylenamesscriptsize {\setsize{featurestylenames}{scriptsize}} +\def\featurestylenamesfootnotesize{\setsize{featurestylenames}{footnotesize}} +\def\featurestylenamessmall {\setsize{featurestylenames}{small}} +\def\featurestylenamesnormalsize {\setsize{featurestylenames}{normalsize}} +\def\featurestylenameslarge {\setsize{featurestylenames}{large}} +\def\featurestylenamesLarge {\setsize{featurestylenames}{Large}} +\def\featurestylenamesLARGE {\setsize{featurestylenames}{LARGE}} +\def\featurestylenameshuge {\setsize{featurestylenames}{huge}} +\def\featurestylenamesHuge {\setsize{featurestylenames}{Huge}} \def\featuresrm{\setfamily{features}{rm}} \def\featuressf{\setfamily{features}{sf}} \def\featurestt{\setfamily{features}{tt}} @@ -5081,14 +5207,36 @@ \else \ifx\third@\first@\white@box\else\textcolor{\third@}{\box@rule}\fi \fi\fi\fi\fi} +\def\featurenamescolor#1{% + \expandafter\xdef\csname ftext@fg@ttop\endcsname{#1} + \expandafter\xdef\csname ftext@fg@top\endcsname{#1} + \expandafter\xdef\csname ftext@fg@bottom\endcsname{#1} + \expandafter\xdef\csname ftext@fg@bbottom\endcsname{#1} +} +\def\featurestylenamescolor#1{% + \expandafter\xdef\csname fstyles@fg@ttop\endcsname{#1} + \expandafter\xdef\csname fstyles@fg@top\endcsname{#1} + \expandafter\xdef\csname fstyles@fg@bottom\endcsname{#1} + \expandafter\xdef\csname fstyles@fg@bbottom\endcsname{#1} +} +\def\featurenamecolor#1#2{\expandafter\xdef\csname ftext@fg@#1\endcsname{#2}} +\def\featurestylenamecolor#1#2{\expandafter\xdef\csname fstyles@fg@#1\endcsname{#2}} \def\namescolor#1{\xdef\names@fg{#1}} \def\namecolor#1#2{% \xdef\first@{consensus} \xdef\second@{#1} \ifx\first@\second@ \expandafter\xdef\csname name@col0\endcsname{#2} + \else + \xdef\first@{featurenames} \xdef\second@{#1} + \ifx\first@\second@ + \xdef\ftext@fg{#2} + \else + \xdef\first@{featurestylenames} \xdef\second@{#1} + \ifx\first@\second@ + \xdef\fstyles@fg{#2} \else \xdef\first@{#1,&,@} \xdef\third@{#2} \namecolor@ - \fi + \fi\fi\fi } \def\numberingcolor#1{\xdef\numbering@fg{#1}} \def\numbercolor#1#2{% @@ -5586,7 +5734,11 @@ \else \expandafter\ifnum\csname pos\the\loopcount\endcsname>\m@x \xdef\m@x{\csname pos\the\loopcount\endcsname} - \xdef\cons@seq{\the\loopcount} \xdef\match@case{1} + \expandafter\ifnum\csname pos\the\loopcount\endcsname<\all@thresh@ld + \xdef\cons@seq{\the\loopcount} \xdef\match@case{1} + \else + \xdef\cons@seq{\the\loopcount} \xdef\match@case{2} + \fi \else \expandafter\ifnum\csname pos\the\loopcount\endcsname=\m@x \xdef\match@case{0} @@ -6017,13 +6169,14 @@ \xdef\constopo{\constopo 2}} \def\allm@tch{% - \ifall@shade \xdef\third@{0} \else \xdef\third@{1} \fi + \xdef\tmp@{\csname res\cons@seq\endcsname} \loopcount=0 \loop \advance\loopcount by 1 \xdef\first@{noshade} \expandafter\ifx\csname hide@seq\the\loopcount\endcsname\first@ \xdef\first@{\csname res\the\loopcount\endcsname} + \ifx\first@\d@t\def\first@{\gap@char}\fi \expandafter\ifx\csname tint@seq\the\loopcount\endcsname\y@ \expandafter\xdef\csname tint@seq\the\loopcount\endcsname{n} \xdef\first@{=\first@}\fi @@ -6034,11 +6187,60 @@ \csname seq\the\loopcount\endcsname% 3\first@} \else + \xdef\second@{\csname res\the\loopcount\endcsname} + \ifx\tmp@\second@ + \ifall@shade \xdef\third@{0} \else \xdef\third@{1} \fi + \else + \xdef\third@{3} + \ifsimmode + \xdef\last@{\csname \prefix@ sim\tmp@\endcsname &@} + \expandafter\get@count\last@ + \innerloopcount=0 \getsim@char + \fi + \fi \xdef\first@{\csname res\the\loopcount\endcsname} + \ifcase\third@ + \ifnum\divref@=\loopcount\else + \xdef\low@up{lower} \ifx\res@llm@tch\low@up \make@lower \else + \xdef\low@up{upper} \ifx\res@llm@tch\low@up + \else \xdef\first@{\res@llm@tch} \fi\fi\fi + \or \ifnum\divref@=\loopcount\else \xdef\low@up{lower} \ifx\res@llm@tch\low@up \make@lower \else \xdef\low@up{upper} \ifx\res@llm@tch\low@up \else \xdef\first@{\res@llm@tch} \fi\fi\fi + \or + \ifnum\divref@=\loopcount\else + \xdef\low@up{lower} \ifx\ressimm@tch\low@up \make@lower \else + \xdef\low@up{upper} \ifx\ressimm@tch\low@up + \else \xdef\first@{\ressimm@tch} \fi\fi\fi + \else + \ifnum\divref@=\loopcount\else + \xdef\low@up{lower} \ifx\resn@m@tch\low@up \make@lower \else + \xdef\low@up{upper} \ifx\resn@m@tch\low@up + \else \xdef\first@{\resn@m@tch} \fi\fi\fi + \fi + \ifx\first@\d@t + \expandafter\ifnum\csname res@count\the\loopcount\endcsname% + <\csname seq@start\the\loopcount\endcsname + \ifsh@wg@ps + \def\first@{\gap@char}\def\third@{7} + \else + \def\first@{{}} \def\third@{8} + \fi + \else + \expandafter\ifnum\csname res@count\the\loopcount\endcsname% + <\csname seq@len\the\loopcount\endcsname + \def\third@{7}\def\first@{\gap@char} + \else + \ifsh@wg@ps + \def\first@{\gap@char}\def\third@{7} + \else + \def\first@{{}} \def\third@{8} + \fi + \fi + \fi + \fi \expandafter\ifx\csname tint@seq\the\loopcount\endcsname\y@ \expandafter\xdef\csname tint@seq\the\loopcount\endcsname{n} \xdef\first@{=\first@}\fi @@ -6046,7 +6248,7 @@ \expandafter\xdef\csname emph@seq\the\loopcount\endcsname{n} \xdef\first@{,\first@}\fi \expandafter\xdef\csname seq\the\loopcount\endcsname{% - \csname seq\the\loopcount\endcsname\third@\first@} + \csname seq\the\loopcount\endcsname\third@\first@} \fi \ifnum\loopcount<\seq@count \repeat \xdef\first@{\csname res\cons@seq\endcsname} @@ -8115,7 +8317,7 @@ \def\temp@{x}\fi% \ifhidechar\xdef\temp@{}\fi% \kern-\box@width\textcolor{\third@}{\hbox to \box@width{% - \res@@style{\hss\temp@\hss}}}% + \legend@size{\res@@style{\hss\temp@\hss}}}}% \kern2ex\textcolor{\legend@fg}{% \legend@size{\csname fgroup@name\the\loopcount\endcsname}} \newline\hbox{}% @@ -8131,7 +8333,7 @@ \def\temp@{X}\xdef\low@up{lower}\ifx\resn@m@tch\low@up\def\temp@{x}\fi% \ifhidechar\xdef\temp@{}\fi% \kern-\box@width\textcolor{\TextNomatch}{\hbox to \box@width{% - \res@@style{\hss\temp@\hss}}}% + \legend@size{\res@@style{\hss\temp@\hss}}}}% \textcolor{\legend@fg}{% \ifgerm@n\kern2ex\legend@size{nicht konserviert}% \else\ifsp@nish\kern2ex\legend@size{no conservado}% @@ -8146,7 +8348,7 @@ \def\temp@{X}\xdef\low@up{lower}\ifx\ressimm@tch\low@up\def\temp@{x}\fi% \ifhidechar\xdef\temp@{}\fi% \kern-\box@width\textcolor{\TextSimilar}{\hbox to \box@width{% - \res@@style{\hss\temp@\hss}}}% + \legend@size{\res@@style{\hss\temp@\hss}}}}% \textcolor{\legend@fg}{% \ifgerm@n\kern2ex\legend@size{\"ahnlich}% \else\ifsp@nish\kern2ex\legend@size{similar}% @@ -8161,11 +8363,11 @@ \def\temp@{X}\xdef\low@up{lower}\ifx\resm@tch\low@up\def\temp@{x}\fi% \ifhidechar\xdef\temp@{}\fi% \kern-\box@width\textcolor{\TextIdentical}{\hbox to \box@width{% - \res@@style{\hss\temp@\hss}}}% + \legend@size{\res@@style{\hss\temp@\hss}}}}% \textcolor{\legend@fg}{% - \ifgerm@n\kern2ex\legend@size{konserviert}% - \else\ifsp@nish\kern2ex\legend@size{conservado}% - \else\kern2ex\legend@size{conserved}\fi\fi} + \ifgerm@n\kern2ex\legend@size{$\ge$\,\thresh@ld\% konserviert}% + \else\ifsp@nish\kern2ex\legend@size{$\ge$\,\thresh@ld\% conservado}% + \else\kern2ex\legend@size{$\ge$\,\thresh@ld\% conserved}\fi\fi} \newline\hbox{}\noindent% \ifall@shade% \ifnames@\ifnames@right\else\hbox to \name@width{\hss}\fi\fi @@ -8176,11 +8378,18 @@ \def\temp@{X}\xdef\low@up{lower}\ifx\res@llm@tch\low@up\def\temp@{x}\fi% \ifhidechar\xdef\temp@{}\fi% \kern-\box@width\textcolor{\TextAllmatch}{\hbox to \box@width{% - \res@@style{\hss\temp@\hss}}}% + \legend@size{\res@@style{\hss\temp@\hss}}}}% + \ifnum\all@thresh@ld=100 \textcolor{\legend@fg}{% \ifgerm@n\kern2ex\legend@size{alle identisch}% \else\ifsp@nish\kern2ex\legend@size{todos id\'enticos}% \else\kern2ex\legend@size{all match}\fi\fi} + \else + \textcolor{\legend@fg}{% + \ifgerm@n\kern2ex\legend@size{$\ge$\,\all@thresh@ld\% konserviert}% + \else\ifsp@nish\kern2ex\legend@size{$\ge$\,\all@thresh@ld\% conservado}% + \else\kern2ex\legend@size{$\ge$\,\all@thresh@ld\% conserved}\fi\fi} + \fi \newline\hbox{}\noindent \fi \fi @@ -9042,6 +9251,7 @@ \textcolor{\f@color}{% \hbox to #1\box@width{\hss\featuretext@size{\strut\fourth@}\hss}}% \fi% + \advance\loopcount by -#1% } \def\put@featuretext{% \if\first@ @% @@ -9057,6 +9267,7 @@ \hbox to \second@\box@width% {\hss\expandafter\putfeature@style{\first@}\hss}\fi% \xdef\first@{#3@}% + \advance\loopcount by -\second@% } \def\put@featurestyle{% \if\first@ @% @@ -9068,35 +9279,104 @@ \def\put@feature{% \vspace{-\baselineskip}% \newline\hbox{}% - \ifnames@right\else\ifnames@\hbox to \name@width{\hss}\fi\fi% - \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \xdef\temp@{ttop}% \ifx\temp@\bottop@% + \ifnames@right\else\ifnames@% + \fontfamily{\ftext@family}\fontseries{\ftext@series}\fontshape{\ftext@shape}% + \selectfont% + \textcolor{\csname ftext@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featuretextn@me\bottop@\endcsname\hss}}\fi\fi% + \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \xdef\first@{\csname textfeature\bottop@\endcsname @}% + \loopcount=\res@perline% \put@featuretext% + \ifnumbers@right\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \ifnames@right\ifnames@% + \fontfamily{\ftext@family}\fontseries{\ftext@series}\fontshape{\ftext@shape}% + \selectfont% + \kern1em\hbox to \loopcount\box@width{\hss}% + \textcolor{\csname ftext@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featuretextn@me\bottop@\endcsname\hss}}\fi\fi% \else% \xdef\temp@{top}% \ifx\temp@\bottop@% + \ifnames@right\else\ifnames@% + \fontfamily{\ftext@family}\fontseries{\ftext@series}\fontshape{\ftext@shape}% + \selectfont% + \textcolor{\csname ftext@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featuretextn@me\bottop@\endcsname\hss}}\fi\fi% + \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \xdef\first@{\csname textfeature\bottop@\endcsname @}% + \loopcount=\res@perline% \put@featuretext% + \ifnumbers@right\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \ifnames@right\ifnames@% + \fontfamily{\ftext@family}\fontseries{\ftext@series}\fontshape{\ftext@shape}% + \selectfont% + \kern1em\hbox to \loopcount\box@width{\hss}% + \textcolor{\csname ftext@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featuretextn@me\bottop@\endcsname\hss}}\fi\fi% \else + \ifnames@right\else\ifnames@% + \fontfamily{\fstyles@family}\fontseries{\fstyles@series}\fontshape{\fstyles@shape}% + \selectfont% + \textcolor{\csname fstyles@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featurestylesn@me\bottop@\endcsname\hss}}\fi\fi% + \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \xdef\first@{\csname stylefeature\bottop@\endcsname @}% + \loopcount=\res@perline% \put@featurestyle% + \ifnumbers@right\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \ifnames@right\ifnames@% + \fontfamily{\fstyles@family}\fontseries{\fstyles@series}\fontshape{\fstyles@shape}% + \selectfont% + \kern1em\hbox to \loopcount\box@width{\hss}% + \textcolor{\csname fstyles@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featurestylesn@me\bottop@\endcsname\hss}}\fi\fi% \fi\fi% \newline\hbox{}% - \ifnames@right\else\ifnames@\hbox to \name@width{\hss}\fi\fi% - \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \ifx\temp@\bottop@% + \ifnames@right\else\ifnames@% + \fontfamily{\fstyles@family}\fontseries{\fstyles@series}\fontshape{\fstyles@shape}% + \selectfont% + \textcolor{\csname fstyles@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featurestylesn@me\bottop@\endcsname\hss}}\fi\fi% + \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \xdef\first@{\csname stylefeature\bottop@\endcsname @}% + \loopcount=\res@perline% \put@featurestyle% + \ifnumbers@right\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \ifnames@right\ifnames@% + \fontfamily{\fstyles@family}\fontseries{\fstyles@series}\fontshape{\fstyles@shape}% + \selectfont% + \kern1em\hbox to \loopcount\box@width{\hss}% + \textcolor{\csname fstyles@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featurestylesn@me\bottop@\endcsname\hss}}\fi\fi% \else% \xdef\temp@{ttop}% \ifx\temp@\bottop@% + \ifnames@right\else\ifnames@% + \fontfamily{\fstyles@family}\fontseries{\fstyles@series}\fontshape{\fstyles@shape}% + \selectfont% + \textcolor{\csname fstyles@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featurestylesn@me\bottop@\endcsname\hss}}\fi\fi% + \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% \xdef\first@{\csname stylefeature\bottop@\endcsname @}% + \loopcount=\res@perline% \put@featurestyle% + \ifnumbers@right\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \ifnames@right\ifnames@% + \fontfamily{\fstyles@family}\fontseries{\fstyles@series}\fontshape{\fstyles@shape}% + \selectfont% + \kern1em\hbox to \loopcount\box@width{\hss}% + \textcolor{\csname fstyles@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featurestylesn@me\bottop@\endcsname\hss}}\fi\fi% \else + \ifnames@right\else\ifnames@% + \fontfamily{\ftext@family}\fontseries{\ftext@series}\fontshape{\ftext@shape}% + \selectfont% + \textcolor{\csname ftext@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featuretextn@me\bottop@\endcsname\hss}}\fi\fi% + \ifnumbers@left\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \xdef\first@{\csname textfeature\bottop@\endcsname @}% \xdef\first@{\csname textfeature\bottop@\endcsname @}% + \loopcount=\res@perline% \put@featuretext% + \ifnumbers@right\ifnumbers@\hbox to \number@width{\hss}\fi\fi% + \ifnames@right\ifnames@% + \fontfamily{\ftext@family}\fontseries{\ftext@series}\fontshape{\ftext@shape}% + \selectfont% + \kern1em\hbox to \loopcount\box@width{\hss}% + \textcolor{\csname ftext@fg@\bottop@\endcsname}{\hbox to \name@width{\csname featuretextn@me\bottop@\endcsname\hss}}\fi\fi% \fi\fi% \newline\hbox{}% } @@ -10711,6 +10991,8 @@ \xdef\hide@true{n} \xdef\hide@now{n} \xdef\hide@label{circ} \xdef\divref@{0} +\xdef\all@thresh@ld{100} \all@shadefalse +\hidefeaturenames \hidefeaturestylenames %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%%%% %%%%% @@ -10746,6 +11028,8 @@ \numberingcolor{Black} % Numbering color is `Black' \shownumbering{right} % Show sequence numbering on the left \namescolor{Black} % Names' color is `Black' +\featurenamescolor{Black} % Feature names' color is `Black' +\featurestylenamescolor{Black} % Feature names' color is `Black' \shownames{left} % Show sequence names on the right \consensuscolors{Black}{White} % All consensus symbols/letters {Black}{White} % appear `Black on White' @@ -10786,6 +11070,14 @@ \setseries{names}{md} % Use normal series for names \setshape {names}{up} % Use upright shape for names \setsize {names}{normalsize} % Use normal size for names +\setfamily{featurenames}{tt} % Use typewriter family for feature names +\setseries{featurenames}{md} % Use normal series for feature names +\setshape {featurenames}{up} % Use upright shape for feature names +\setsize {featurenames}{normalsize}% Use normal size for feature names +\setfamily{featurestylenames}{tt} % Use typewriter family for feature style names +\setseries{featurestylenames}{md} % Use normal series for feature style names +\setshape {featurestylenames}{up} % Use upright shape for feature style names +\setsize {featurestylenames}{normalsize}% Use normal size for feature style names \setfamily{features}{rm} % Use roman family for feature texts \setseries{features}{md} % Use normal series for feature texts \setshape {features}{it} % Use italics shape for feature texts -- cgit v1.2.3