From 5e1a6326b6652f7e6b95fc1aa7a72b00072f21c3 Mon Sep 17 00:00:00 2001 From: Karl Berry Date: Wed, 24 Apr 2013 23:03:45 +0000 Subject: tikz-bayesnet (24apr13) git-svn-id: svn://tug.org/texlive/trunk@30094 c570f23f-e606-0410-a88d-b1316a301751 --- .../texmf-dist/doc/latex/tikz-bayesnet/LICENSE_GPL | 674 +++++++++++++++++++++ .../doc/latex/tikz-bayesnet/LICENSE_LPPL | 416 +++++++++++++ .../texmf-dist/doc/latex/tikz-bayesnet/README.rst | 120 ++++ .../texmf-dist/doc/latex/tikz-bayesnet/example.tex | 158 +++++ .../tikz-bayesnet/model_citation_influence.tex | 135 +++++ .../doc/latex/tikz-bayesnet/model_lda.tex | 62 ++ .../doc/latex/tikz-bayesnet/model_pca.tex | 36 ++ .../doc/latex/tikz-bayesnet/model_pca2.tex | 71 +++ .../tikz-bayesnet/tikzlibrarybayesnet.code.tex | 140 +++++ 9 files changed, 1812 insertions(+) create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/LICENSE_GPL create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/LICENSE_LPPL create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/README.rst create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/example.tex create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/model_citation_influence.tex create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/model_lda.tex create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca.tex create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca2.tex create mode 100644 Master/texmf-dist/doc/latex/tikz-bayesnet/tikzlibrarybayesnet.code.tex (limited to 'Master/texmf-dist/doc/latex') diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/LICENSE_GPL b/Master/texmf-dist/doc/latex/tikz-bayesnet/LICENSE_GPL new file mode 100644 index 00000000000..94a9ed024d3 --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/LICENSE_GPL @@ -0,0 +1,674 @@ + GNU GENERAL PUBLIC LICENSE + Version 3, 29 June 2007 + + Copyright (C) 2007 Free Software Foundation, Inc. + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + Preamble + + The GNU General Public License is a free, copyleft license for +software and other kinds of works. + + The licenses for most software and other practical works are designed +to take away your freedom to share and change the works. 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To use +the library in your LaTeX file + +.. code-block:: python + + \usepackage{tikz} + \usetikzlibrary{bayesnet} + +Compile the LaTeX example: + +.. code-block:: none + + pdflatex example.tex + +and see the resulting PDF file example.pdf. + +Example +------- + +.. figure:: http://i.imgur.com/CzNyk.png + :align: center + :alt: Bayesian network. + + PCA model as a Bayesian network and a directed factor graph. + +.. figure:: http://i.imgur.com/CBZqL.png + :align: center + :alt: Citation influence model + + Directed factor graph of the citation influence model. + + +Related projects +---------------- + +This library is derived from a technical report "Directed Factor Graph +Notation for Generative Models" and the accompanying TikZ macros by +Laura Dietz 2010 (http://people.cs.umass.edu/~dietz/). + +GraphViz (http://www.graphviz.org/) is a more general open source +graph visualization software. It uses DOT file format to describe the +structure of the graph. The DOT file can be converted to LaTeX using +:code:`dot2tex` (http://www.fauskes.net/code/dot2tex/). + +UAI (http://graphmod.ics.uci.edu/uai08/FileFormat) is a simple text +file format to describe Markov networks. The UAI file format can be +converted to DOT file format using :code:`uai2dot` +(https://github.com/drewfrank/uai2dot). + +License +------- + +| Copyright (C) 2010-2011 Laura Dietz +| Copyright (C) 2012 Jaakko Luttinen jaakko.luttinen@aalto.fi + +This work may be distributed and/or modified under the conditions of +the LaTeX Project Public License, either version 1.3 of this license +or (at your option) any later version. The license is in the file +LICENSE_LPPL and the latest version of this license is in +http://www.latex-project.org/lppl.txt and version 1.3 or later is part +of all distributions of LaTeX version 2005/12/01 or later. + +This work is free software: you can redistribute it and/or modify it +under the terms of the GNU General Public License as published by the +Free Software Foundation, either version 3 of the License, or (at your +option) any later version. This work is distributed in the hope that +it will be useful, but WITHOUT ANY WARRANTY; without even the implied +warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See +the GNU General Public License for more details. See the license in +the file LICENSE_GPL or visit . + + diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/example.tex b/Master/texmf-dist/doc/latex/tikz-bayesnet/example.tex new file mode 100644 index 00000000000..19381bd8a1c --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/example.tex @@ -0,0 +1,158 @@ +% example.tex +% +% Copyright (C) 2010,2011 Laura Dietz +% Copyright (C) 2012 Jaakko Luttinen +% +% This file may be distributed and/or modified +% +% 1. under the LaTeX Project Public License and/or +% 2. under the GNU General Public License. +% +% See the files LICENSE_LPPL and LICENSE_GPL for more details. + +\documentclass[a4paper]{article} + +\usepackage{tikz} +\usetikzlibrary{bayesnet} +%\pgfrealjobname{example} % name of this file + +\title{Graphical Models in Tikz} +\author{Laura Dietz, Jaakko Luttinen} + +\begin{document} + +\maketitle + +TikZ examples for graphical models (Bayesian networks) and directed +factor graphs \cite{Dietz:2010}. + +% A table of node types +\begin{table}[ht] + \caption{Node types} + \begin{center} + \begin{tabular}{llc} + Type & Syntax & Output + \\ + \hline + Latent variable & + \texttt{\textbackslash node[latent]} & + \tikz{ % + \node[latent] {$x$}; % + } + \\ + Observed variable & + \texttt{\textbackslash node[obs]} & + \tikz{ % + \node[obs] {$y$}; % + } + \\ + Deterministic & + \texttt{\textbackslash node[det]} & + \tikz{ % + \node[det] {dot} ; % + } + \\ + Constant & + \texttt{\textbackslash node[const]} & + \tikz{ % + \node[const] {$a$}; % + } + \\ + Factor & + \texttt{\textbackslash node[factor]} & + \tikz{ % + \node[factor] [label=$\mathcal{N}$] {}; % + } + \\ + Factor with nodes & + & + \tikz{ % + \node[obs] (y) {$y$} ; % + \node[latent, left=of y, yshift=0.5cm] (mu) {$\mu$} ; % + \node[latent, left=of y, yshift=-0.5cm] (tau) {$\tau$} ; % + \factor[left=of y] {y-factor} {$\mathcal{N}$} {} {}; + \factoredge {mu,tau} {y-factor} {y} ; % + } + \\ + Plate & + \texttt{\textbackslash plate} & + \tikz{ % + \node[latent] (x) {$x_m$}; % + \plate {} {(x)} {$m \in \mathcal{M}$}; % + } + \\ + Gate & + & + \tikz{ + % Nodes + \node[obs] (k) {$k$}; % + \node[latent, above=2 of k] (l) {$\lambda$}; % + \factor[above=0.8 of k] {k-f} {Multi} {} {}; % + \node[latent, right=of k-f] (paa) {$\phi$}; % + %\node[latent, right=of k-f] (p) {$\phi$}; % + % Connections + \factoredge {paa} {k-f} {k} ; % + % Gate + \gate {} {(k-f)(k-f-caption)} {l} ; % + } + \end{tabular} + \end{center} +\end{table} + + +% Simple Bayesian network +\begin{figure}[ht] + \begin{center} + \begin{tabular}{cc} + \input{model_pca} & + \input{model_pca2} + \end{tabular} + \end{center} + \caption{PCA model as a Bayesian network and a directed factor + graph.} +\end{figure} + +% Latent Dirichlet allocation +\begin{figure}[ht] + \begin{center} + \input{model_lda} + \end{center} + \caption{Latent Dirichlet allocation as directed factor graph.} +\end{figure} + +% Citation influence model +\begin{figure}[ht] + \begin{center} + \input{model_citation_influence} + \end{center} + \caption{Citation influence model with own topics \cite{Dietz:2007} + as directed factor graph.} +\end{figure} + +\clearpage + +\begin{thebibliography}{9} + +\bibitem{Dietz:2010} + Laura Dietz, + \emph{Directed Factor Graph Notation for Generative Models}. + Technical Report. 2010 + +% Laura Dietz, Steffen Bickel, Tobias Scheffer. +% Unsupervised Prediction of Citation Influences. +% In: Proceedings of International Conference on Machine Learning. 2007 +\bibitem{Dietz:2007} + Laura Dietz, Steffen Bickel, Tobias Scheffer, + \emph{Unsupervised Prediction of Citation Influences}. + In: Proceedings of International Conference on Machine + Learning. 2007 + + +\end{thebibliography} + +\end{document} + +%%% Local Variables: +%%% mode: tex-pdf +%%% TeX-master: t +%%% End: diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/model_citation_influence.tex b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_citation_influence.tex new file mode 100644 index 00000000000..5df66a5a190 --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_citation_influence.tex @@ -0,0 +1,135 @@ +% model_citation_influence.tex +% +% Copyright (C) 2010,2011 Laura Dietz +% Copyright (C) 2012 Jaakko Luttinen +% +% This file may be distributed and/or modified +% +% 1. under the LaTeX Project Public License and/or +% 2. under the GNU General Public License. +% +% See the files LICENSE_LPPL and LICENSE_GPL for more details. + +% Citation influence model +% Cite this model as +% Laura Dietz, Steffen Bickel, Tobias Scheffer. +% Unsupervised Prediction of Citation Influences. +% In: Proceedings of International Conference on Machine Learning. 2007 + +%\beginpgfgraphicnamed{model-citation-influence} +\begin{tikzpicture} + + % Layout the variables + \matrix[row sep=0.5cm, column sep=1.2cm] (LDA) + { % + & % + & % + \node[latent] (gamma) {$\gamma$} ; & % + \node[latent] (lambda) {$\lambda$} ; & % + \node[latent] (psi) {$\psi$} ; % + \\ + \\ + \node[latent] (theta) {$\theta$} ; & % + & % + \node[latent] (C) {$C$} ; & % + \node[latent] (S) {$S$} ; & % + \\ + & % + & % + \factor {T-f1} {Multi} {} {}; & % + & % + \factor {T-f2} {below:Multi} {} {}; & % + \\ + \node[latent] (T') {$T'$} ; & % + & % + \node[latent] (T) {$T$} ; & % + \\ + \factor {W'-f} {Multi} {} {}; & % + \node[latent] (phi) {$\phi$} ; & % + \factor {W-f} {Multi} {} {}; % + \\ + \node[obs] (W') {$W'$} ; & % + & % + \node[obs] (W) {$W$} ; + \\ + }; + + % Remaining factors + \factor[above=of T'] {T'-f} {left:Multi} {} {}; % + \factor[above=of theta] {theta-f} {left:Dir} {} {}; % + \factor[above=of C] {C-f} {left:Multi} {} {}; % + \factor[above=of S] {S-f} {left:Bern} {} {}; % + \factor[above=of gamma] {gamma-f} {left:Dir} {} {}; % + \factor[above=of lambda] {lambda-f} {left:Beta} {} {}; % + \factor[above=of psi] {psi-f} {left:Dir} {} {}; % + \factor[above=of phi] {phi-f} {left:Dir} {} {}; % + + % Hyperparameters + \node[const, above=of theta] (atheta) {$\alpha_\theta$}; % + \node[const, above=of phi] (aphi) {$\alpha_\phi$}; % + \node[const, above=of gamma] (agamma) {$\alpha_\gamma$}; % + \node[const, above=of lambda, xshift=-0.5cm] (alambda1) + {$\alpha_{\lambda_\theta}$}; % + \node[const, above=of lambda, xshift=0.5cm] (alambda2) + {$\alpha_{\lambda_\psi}$}; % + \node[const, above=of psi] (apsi) {$\alpha_\psi$}; % + + % Factor connections + \factoredge {phi} {W'-f} {W'} ; % + \factoredge {phi} {W-f} {W} ; % + \factoredge {theta} {T'-f} {T'} ; % + \factoredge {theta} {T-f1} {T} ; % + \factoredge {psi} {T-f2} {T} ; % + \factoredge {atheta} {theta-f} {theta} ; % + \factoredge {gamma} {C-f} {C} ; % + \factoredge {lambda} {S-f} {S} ; % + \factoredge {agamma} {gamma-f} {gamma} ; % + \factoredge {alambda1,alambda2} {lambda-f} {lambda} ; % + \factoredge {apsi} {psi-f} {psi} ; % + \factoredge {aphi} {phi-f} {phi} ; % + + % Gates + \gate {W'-gate} {(W'-f)(W'-f-caption)} {T'} ; % + \gate {W-gate} {(W-f)(W-f-caption)} {T} ; % + \gate {T-gate} {(T-f1)(T-f1-caption)} {C} ; + \vgate {T-vgate} % + {(T-gate)} {$S=0$} % + {(T-f2)(T-f2-caption)} {$S=1$} % + {S} ; % + + % Plates + \plate {LDA1} { % + (T')(T'-f)(T'-f-caption) % + (W')(W'-gate) % + } {$\forall w' \in c$} ; % + + \plate {LDA2} { % + (LDA1) % + (theta)(theta-f)(theta-f-caption) % + } {$\forall c \in \mathcal{C}$} ; % + + \plate {} { % + (phi)(phi-f)(phi-f-caption) % + } {$\forall t \in \mathcal{T}$} ; % + + \plate {P1} { % + (W)(W-gate) % + (T)(T-vgate) % + (C)(C-f)(C-f-caption) % + (S)(S-f)(S-f-caption) % + } {$\forall w \in d$} ; + + \plate {} { % + (P1) % + (gamma)(gamma-f)(gamma-f-caption) % + (lambda)(lambda-f)(lambda-f-caption) % + (psi)(psi-f)(psi-f-caption) % + } {$\forall d \in \mathcal{D}$} ; % + +\end{tikzpicture} +%\endpgfgraphicnamed + +%%% Local Variables: +%%% mode: tex-pdf +%%% TeX-master: "example" +%%% End: diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/model_lda.tex b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_lda.tex new file mode 100644 index 00000000000..92e9acc4a2f --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_lda.tex @@ -0,0 +1,62 @@ +% model_lda.tex +% +% Copyright (C) 2010,2011 Laura Dietz +% Copyright (C) 2012 Jaakko Luttinen +% +% This file may be distributed and/or modified +% +% 1. under the LaTeX Project Public License and/or +% 2. under the GNU General Public License. +% +% See the files LICENSE_LPPL and LICENSE_GPL for more details. + +% Latent Diriclet allocation model + +%\beginpgfgraphicnamed{model-lda} +\begin{tikzpicture}[x=1.7cm,y=1.8cm] + + % Nodes + + \node[obs] (X) {$X$} ; % + \node[latent, above=of X] (T) {$T$} ; % + \node[latent, above=of T] (theta) {$\theta$}; % + \node[const, above=of theta] (atheta) {$\alpha_\theta$}; + + + % Factors + \factor[above=of X] {X-f} {Multi} {} {} ; % + \factor[above=of T] {T-f} {left:Multi} {} {} ; % + \factor[above=of theta] {theta-f} {left:Dir} {} {} ; % + + % More nodes + \node[latent, right=of X-f] (phi) {$\phi$}; % + \node[const, above=of phi] (aphi) {$\alpha_\phi$}; % + + \factor[above=of phi] {phi-f} {right:Dir} {} {} ; % + + \factoredge {theta} {T-f} {T} ; % + \factoredge {atheta} {theta-f} {theta} ; % + \factoredge {phi} {X-f} {X} ; % + \factoredge {aphi} {phi-f} {phi} ; % + + \gate {X-gate} {(X-f)(X-f-caption)} {T} + + \plate {plate1} { % + (X)(X-gate) % + (T)(T-f)(T-f-caption) % + } {$\forall 1 \leq i \leq n_d$}; % + \plate {} { % + (plate1) % + (theta)(theta-f)(theta-f-caption) % + } {$\forall d \in \mathcal{D}$} ; % + \plate {} { % + (phi)(phi-f)(phi-f-caption) % + } {$\forall t \in \mathcal{T}$} ; % + +\end{tikzpicture} +%\endpgfgraphicnamed + +%%% Local Variables: +%%% mode: tex-pdf +%%% TeX-master: "example" +%%% End: diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca.tex b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca.tex new file mode 100644 index 00000000000..6385827bff2 --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca.tex @@ -0,0 +1,36 @@ +% model_pca.tex +% +% Copyright (C) 2012 Jaakko Luttinen +% +% This file may be distributed and/or modified +% +% 1. under the LaTeX Project Public License and/or +% 2. under the GNU General Public License. +% +% See the files LICENSE_LPPL and LICENSE_GPL for more details. + +% PCA model + +%\beginpgfgraphicnamed{model-pca} +\begin{tikzpicture} + + % Define nodes + \node[obs] (y) {$y$}; + \node[latent, above=of y, xshift=-1.2cm] (w) {$\mathbf{w}$}; + \node[latent, above=of y, xshift=1.2cm] (x) {$\mathbf{x}$}; + \node[latent, right=2cm of y] (t) {$\tau$}; + + % Connect the nodes + \edge {x,w,t} {y} ; % + + % Plates + \plate {yx} {(x)(y)} {$N$} ; + \plate {} {(w)(y)(yx.north west)(yx.south west)} {$M$} ; + +\end{tikzpicture} +%\endpgfgraphicnamed + +%%% Local Variables: +%%% mode: tex-pdf +%%% TeX-master: "example" +%%% End: diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca2.tex b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca2.tex new file mode 100644 index 00000000000..188d030ad42 --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/model_pca2.tex @@ -0,0 +1,71 @@ +% model_pca2.tex +% +% Copyright (C) 2010,2011 Laura Dietz +% Copyright (C) 2012 Jaakko Luttinen +% +% This file may be distributed and/or modified +% +% 1. under the LaTeX Project Public License and/or +% 2. under the GNU General Public License. +% +% See the files LICENSE_LPPL and LICENSE_GPL for more details. + +% PCA model + +%\beginpgfgraphicnamed{model-pca} +\begin{tikzpicture} + + % Define nodes + + % Y + \node[obs] (y) {$y$}; % + \factor[above=of y] {y-f} {left:$\mathcal{N}$} {} {} ; % + + % W and X + \node[det, above=of y] (dot) {dot} ; % + \node[latent, above left=1.2 of dot] (w) {$\mathbf{w}$}; % + \node[latent, above right=1.2 of dot] (x) {$\mathbf{x}$}; % + + % W hyperparameters + \node[const, above=1.2 of w, xshift=-0.5cm] (mw) {$\mu_w$} ; % + \node[const, above=1.2 of w, xshift=0.5cm] (aw) {$\alpha_w$} ; % + + % X hyperparameters + \node[const, above=1.2 of x, xshift=-0.5cm] (mx) {$\mu_x$} ; % + \node[const, above=1.2 of x, xshift=0.5cm] (ax) {$\alpha_x$} ; % + + % noise + \node[latent, right=2.5cm of y-f] (t) {$\tau$}; % + \node[const, above=of t, xshift=-0.5cm] (at) {$\alpha_\tau$} ; % + \node[const, above=of t, xshift=0.5cm] (bt) {$\beta_\tau$} ; % + + % Factors + \factor[above=of w] {w-f} {left:$\mathcal{N}$} {mw,aw} {w} ; % + \factor[above=of x] {x-f} {left:$\mathcal{N}$} {mx,ax} {x} ; % + \factor[above=of t] {t-f} {left:$\mathcal{G}$} {at,bt} {t} ; % + \factoredge {dot,t} {y-f} {y} ; % + + % Connect w and x to the dot node + \edge[-] {w,x} {dot} ; + + % Plates + \plate {yx} { % + (y)(y-f)(y-f-caption) % + (x)(x-f)(x-f-caption) % + (dot) % + } {$N$} ; + \plate {} {% + (y)(y-f)(y-f-caption) % + (w)(w-f)(w-f-caption) % + (dot) % + (yx.north west)(yx.south west) % + } {$M$} ; + +\end{tikzpicture} +%\endpgfgraphicnamed + +%%% Local Variables: +%%% mode: tex-pdf +%%% TeX-master: "example" +%%% End: + diff --git a/Master/texmf-dist/doc/latex/tikz-bayesnet/tikzlibrarybayesnet.code.tex b/Master/texmf-dist/doc/latex/tikz-bayesnet/tikzlibrarybayesnet.code.tex new file mode 100644 index 00000000000..4253532c9f2 --- /dev/null +++ b/Master/texmf-dist/doc/latex/tikz-bayesnet/tikzlibrarybayesnet.code.tex @@ -0,0 +1,140 @@ +% tikzlibrary.code.tex +% +% Copyright 2010-2011 by Laura Dietz +% Copyright 2012 by Jaakko Luttinen +% +% This file may be distributed and/or modified +% +% 1. under the LaTeX Project Public License and/or +% 2. under the GNU General Public License. +% +% See the files LICENSE_LPPL and LICENSE_GPL for more details. + +% Load other libraries +\usetikzlibrary{shapes} +\usetikzlibrary{fit} +\usetikzlibrary{chains} +\usetikzlibrary{arrows} + +% Latent node +\tikzstyle{latent} = [circle,fill=white,draw=black,inner sep=1pt, +minimum size=20pt, font=\fontsize{10}{10}\selectfont, node distance=1] +% Observed node +\tikzstyle{obs} = [latent,fill=gray!25] +% Constant node +\tikzstyle{const} = [rectangle, inner sep=0pt, node distance=1] +% Factor node +\tikzstyle{factor} = [rectangle, fill=black,minimum size=5pt, inner +sep=0pt, node distance=0.4] +% Deterministic node +\tikzstyle{det} = [latent, diamond] + +% Plate node +\tikzstyle{plate} = [draw, rectangle, rounded corners, fit=#1] +% Invisible wrapper node +\tikzstyle{wrap} = [inner sep=0pt, fit=#1] +% Gate +\tikzstyle{gate} = [draw, rectangle, dashed, fit=#1] + +% Caption node +\tikzstyle{caption} = [font=\footnotesize, node distance=0] % +\tikzstyle{plate caption} = [caption, node distance=0, inner sep=0pt, +below left=5pt and 0pt of #1.south east] % +\tikzstyle{factor caption} = [caption] % +\tikzstyle{every label} += [caption] % + +\tikzset{>={triangle 45}} + +%\pgfdeclarelayer{b} +%\pgfdeclarelayer{f} +%\pgfsetlayers{b,main,f} + +% \factoredge [options] {inputs} {factors} {outputs} +\newcommand{\factoredge}[4][]{ % + % Connect all nodes #2 to all nodes #4 via all factors #3. + \foreach \f in {#3} { % + \foreach \x in {#2} { % + \draw[-,#1] (\x) edge[-] (\f) ; % + } ; + \foreach \y in {#4} { % + \draw[->,#1] (\f) -- (\y) ; % + } ; + } ; +} + +% \edge [options] {inputs} {outputs} +\newcommand{\edge}[3][]{ % + % Connect all nodes #2 to all nodes #3. + \foreach \x in {#2} { % + \foreach \y in {#3} { % + \draw[->,#1] (\x) -- (\y) ;% + } ; + } ; +} + +% \factor [options] {name} {caption} {inputs} {outputs} +\newcommand{\factor}[5][]{ % + % Draw the factor node. Use alias to allow empty names. + \node[factor, label={[name=#2-caption]#3}, name=#2, #1, + alias=#2-alias] {} ; % + % Connect all inputs to outputs via this factor + \factoredge {#4} {#2-alias} {#5} ; % +} + +% \plate [options] {name} {fitlist} {caption} +\newcommand{\plate}[4][]{ % + \node[wrap=#3] (#2-wrap) {}; % + \node[plate caption=#2-wrap] (#2-caption) {#4}; % + \node[plate=(#2-wrap)(#2-caption), #1] (#2) {}; % +} + +% \gate [options] {name} {fitlist} {inputs} +\newcommand{\gate}[4][]{ % + \node[gate=#3, name=#2, #1, alias=#2-alias] {}; % + \foreach \x in {#4} { % + \draw [-*,thick] (\x) -- (#2-alias); % + } ;% +} + +% \vgate {name} {fitlist-left} {caption-left} {fitlist-right} +% {caption-right} {inputs} +\newcommand{\vgate}[6]{ % + % Wrap the left and right parts + \node[wrap=#2] (#1-left) {}; % + \node[wrap=#4] (#1-right) {}; % + % Draw the gate + \node[gate=(#1-left)(#1-right)] (#1) {}; % + % Add captions + \node[caption, below left=of #1.north ] (#1-left-caption) + {#3}; % + \node[caption, below right=of #1.north ] (#1-right-caption) + {#5}; % + % Draw middle separation + \draw [-, dashed] (#1.north) -- (#1.south); % + % Draw inputs + \foreach \x in {#6} { % + \draw [-*,thick] (\x) -- (#1); % + } ;% +} + +% \hgate {name} {fitlist-top} {caption-top} {fitlist-bottom} +% {caption-bottom} {inputs} +\newcommand{\hgate}[6]{ % + % Wrap the left and right parts + \node[wrap=#2] (#1-top) {}; % + \node[wrap=#4] (#1-bottom) {}; % + % Draw the gate + \node[gate=(#1-top)(#1-bottom)] (#1) {}; % + % Add captions + \node[caption, above right=of #1.west ] (#1-top-caption) + {#3}; % + \node[caption, below right=of #1.west ] (#1-bottom-caption) + {#5}; % + % Draw middle separation + \draw [-, dashed] (#1.west) -- (#1.east); % + % Draw inputs + \foreach \x in {#6} { % + \draw [-*,thick] (\x) -- (#1); % + } ;% +} + -- cgit v1.2.3