From b4fc5f639874db951177ec539299d20908adb654 Mon Sep 17 00:00:00 2001 From: Karl Berry Date: Mon, 9 Jan 2006 00:44:40 +0000 Subject: doc 4 git-svn-id: svn://tug.org/texlive/trunk@80 c570f23f-e606-0410-a88d-b1316a301751 --- Master/texmf-dist/doc/latex/texshade/ciliate.cod | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) create mode 100644 Master/texmf-dist/doc/latex/texshade/ciliate.cod (limited to 'Master/texmf-dist/doc/latex/texshade/ciliate.cod') diff --git a/Master/texmf-dist/doc/latex/texshade/ciliate.cod b/Master/texmf-dist/doc/latex/texshade/ciliate.cod new file mode 100644 index 00000000000..36748d765ed --- /dev/null +++ b/Master/texmf-dist/doc/latex/texshade/ciliate.cod @@ -0,0 +1,19 @@ + +%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% +%%%%% %%%%% +%%%%% Ciliate macronuclear genetic code definitions %%%%% +%%%%% %%%%% +%%%%% Only exchanges compared to the standard code must be defined. %%%%% +%%%%% %%%%% +%%%%% (The last codon of the list is used for backtranslations %%%%% +%%%%% from protein to DNA sequences---therefore the wobbles) %%%%% +%%%%% %%%%% +%%%%% %%%%% +%%%%% Activate these definitions for your alignment by the following %%%%% +%%%%% command in the texshade environment: %%%%% +%%%%% %%%%% +%%%%% \geneticcode{ciliate} %%%%% +%%%%% %%%%% +%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% + +\codon{Q}{TAA,TAG,UAA,UAG,YAR} -- cgit v1.2.3