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-rw-r--r--Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex54
1 files changed, 26 insertions, 28 deletions
diff --git a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
index 01d25e170ce..71ac080b102 100644
--- a/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
+++ b/Master/texmf-dist/doc/metapost/mcf2graph/mcf_manual.tex
@@ -1,5 +1,5 @@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Molecular Coding Format manual by Akira Yamaji 2022.03.13
+% Molecular Coding Format manual by Akira Yamaji 2022.03.27
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\documentclass[a4paper]{article}
\usepackage[pdftex]{graphicx}
@@ -1093,8 +1093,8 @@ endfor
\end{verbatim}
\MCFgraph
%-----------------------------------------------------------------------------
-\subsection{Function check()}
-\index{check()}%
+\subsection{Function mc\_check()}
+\index{mc\_check()}%
\begin{verbatim}
(immediately compile)
@@ -1104,17 +1104,17 @@ endfigm
(check mcf and compile)
-** check(mc) : error count
+** mc_check(mc) : error count
beginfigm("EN:Pyridine",
":<30,Ph,}2:N") % ** extra '}'
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{verbatim}
\MCFgraph\hspace{22mm}\MCFgraph
\begin{verbatim}
-check(mc)=0 check(mc)>=1
+mc_check(mc)=0 mc_check(mc)>=1
\end{verbatim}
%===============================================================================
\newpage
@@ -1382,13 +1382,13 @@ endfigm
\section{MCF example}
%-----------------------------------------------------------------------------
\subsection{Luciferin}
-\index{check()}%
+\index{mc\_check()}%
\begin{verbatim}
(use library file 'mcf_library')
beginfigm("f:mcf_library",
"t:EN","v:Luciferin")
fsize:=(50mm,15mm);
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{verbatim}
\MCFgraph
@@ -1402,7 +1402,7 @@ beginfigm("EN:Colchicine","MW:385.41",
": @9,\,NH,!,//O,! ")
%-------------------------------------
fsize:=(50mm,20mm);
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{verbatim}
\MCFgraph
@@ -1424,7 +1424,7 @@ beginfigm("EN:Paclitaxel","MW:853.91",
": @12,\*^-15,O,60,//O,-60 ")
%------------------------------------
fsize:=(50mm,25mm);
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{verbatim}
\MCFgraph
@@ -1450,7 +1450,7 @@ beginfigm("EN:Maltose","MW:342.3",
": 6^$90:/!OH ")
%-----------------------------------------
fsize:=(50mm,20mm);
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{verbatim}
\MCFgraph
@@ -1476,7 +1476,7 @@ beginfigm("EN:Cellobiose","MW:342.3",
": 6^$90:/!OH ")
%-----------------------------------------
fsize:=(50mm,20mm);
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{verbatim}
\MCFgraph
@@ -1516,29 +1516,29 @@ beginfigm("EN:Cholesterol","MW:386.65", >information
": {4,12}:*/_^60, ", > mc3
": @-1,18,/*_,-60,!3,?! ") > mc4
%---------------------------------------- >
- if check(mc)=0: MC(scantokens(mc)) fi > mc=mc1 - mc4
+ if mc_check(mc)=0: MC(scantokens(mc)) fi > mc=mc1 - mc4
endfigm >
%------------------------------------------------------------------------------
beginfigm("f:mcf_library.mcf","t:EN","v:Adenine") > from mcf_library.mcf
- if check(mc)=0: MC(scantokens(mc)) fi > select EN="Adenine"
+ if mc_check(mc)=0: MC(scantokens(mc)) fi > select EN="Adenine"
endfigm >
%------------------------------------------------------------------------------
beginfigm("t:EN","v:Guanine") > select EN="Guanine"
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
%------------------------------------------------------------------------------
beginfigm("t:EN","v:Cytosine") > select EN="Cytosine"
- if check(mc)=0: MC(scantokens(mc)) fi >
+ if mc_check(mc)=0: MC(scantokens(mc)) fi >
endfigm >
%------------------------------------------------------------------------------
beginfigm("t:n","v+:4") > v+:4 = select No.4
- if check(mc)=0: MC(scantokens(mc)) fi > keep file open
+ if mc_check(mc)=0: MC(scantokens(mc)) fi > keep file open
endfigm >
%------------------------------------------------------------------------------
forever:
%%%%%%%%%% beginfigm("f:mcf_library","v+:*") > select all
beginfigm("f:mcf_library","t:EXA","v+:1") > 'v+:1'= select EXA=1
- if f_EOF=0: if check(mc)=0: MC(scantokens(mc)) fi fi > keep file open
+ if f_EOF=0: if mc_check(mc)=0: MC(scantokens(mc)) fi fi > keep file open
endfigm >
exitif f_EOF=1; > exit if file end
endfor
@@ -1609,12 +1609,12 @@ Cat:biological;EN:Stearic acid;MW:284.48
%------------------------------------------------------------------------------
\noindent%
\newpage
-\subsection{Function query()}
-\index{query()}%
+\subsection{Function mc\_query()}
+\index{mc\_query()}%
\paragraph{(Example)}
\begin{verbatim}
%--------------------------------------------------------------
-% query()
+% mc_query()
%
% "f:filename" : input file name (default "mcf_library.mcf")
% "o:filename" : output file name (default "temp.mcf")
@@ -1626,13 +1626,11 @@ Cat:biological;EN:Stearic acid;MW:284.48
% filter 2 : MW>=285
% filter 3 : MW<=295
%--------------------------------------------------------------
-query("s:EN",
-%%%%% "f:mcf_library.mcf","o:temp.mcf","s:EN",
- "Cat=biological","MW>=285","MW<=295");
+mc_query("s:EN","Cat=biological","MW>=285","MW<=295");
%--------------------------------------------------------------
forever:
beginfigm("f:temp","v+:*") % use file temp.mcf / select all
- if f_EOF=0: if check(mc)=0: MC(scantokens(mc)) fi fi
+ if f_EOF=0: if mc_check(mc)=0: MC(scantokens(mc)) fi fi
endfigm
exitif f_EOF=1;
endfor
@@ -1952,7 +1950,7 @@ M END
": {1^60,5^180,16^60}:/*H, ",
": @14,\*,|,?5,{1,4}=dl,3:O ")
%----------------------------------------
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{mplibcode}\\
%--------------------------------------------------------------------
@@ -1965,7 +1963,7 @@ M END
": {3,7,12,16}:/_, ",
": |,?6,6=dl,{6,2^35,2^-35}:/_ ")
%------------------------------------------
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm
\end{mplibcode}\\
%--------------------------------------------------------------------
@@ -1979,7 +1977,7 @@ M END
": 2:/COOH,7://_,13:*/OH,8:/*OH, ",
": 14:*/_,{1^60,4^60}:*/H ")
%------------------------------------
- if check(mc)=0: MC(scantokens(mc)) fi
+ if mc_check(mc)=0: MC(scantokens(mc)) fi
endfigm;
%--------------------------------------------------------------------
\end{mplibcode}\\
generated by cgit v1.2.3 (git 2.39.1) at 2024-11-08 04:14:50 +0000