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authorNorbert Preining <norbert@preining.info>2019-09-02 13:46:59 +0900
committerNorbert Preining <norbert@preining.info>2019-09-02 13:46:59 +0900
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+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% This is a (brief) model paper using the achemso class
+%% The document class accepts keyval options, which should include
+%% the target journal and optionally the manuscript type.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\documentclass[journal=jacsat,manuscript=article]{achemso}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Place any additional packages needed here. Only include packages
+%% which are essential, to avoid problems later.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\usepackage{chemformula} % Formula subscripts using \ch{}
+\usepackage[T1]{fontenc} % Use modern font encodings
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% If issues arise when submitting your manuscript, you may want to
+%% un-comment the next line. This provides information on the
+%% version of every file you have used.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%\listfiles
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Place any additional macros here. Please use \newcommand* where
+%% possible, and avoid layout-changing macros (which are not used
+%% when typesetting).
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\newcommand*\mycommand[1]{\texttt{\emph{#1}}}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Meta-data block
+%% ---------------
+%% Each author should be given as a separate \author command.
+%%
+%% Corresponding authors should have an e-mail given after the author
+%% name as an \email command. Phone and fax numbers can be given
+%% using \phone and \fax, respectively; this information is optional.
+%%
+%% The affiliation of authors is given after the authors; each
+%% \affiliation command applies to all preceding authors not already
+%% assigned an affiliation.
+%%
+%% The affiliation takes an option argument for the short name. This
+%% will typically be something like "University of Somewhere".
+%%
+%% The \altaffiliation macro should be used for new address, etc.
+%% On the other hand, \alsoaffiliation is used on a per author basis
+%% when authors are associated with multiple institutions.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\author{Andrew N. Other}
+\altaffiliation{A shared footnote}
+\author{Fred T. Secondauthor}
+\altaffiliation{Current address: Some other place, Othert\"own,
+Germany}
+\author{I. Ken Groupleader}
+\altaffiliation{A shared footnote}
+\email{i.k.groupleader@unknown.uu}
+\phone{+123 (0)123 4445556}
+\fax{+123 (0)123 4445557}
+\affiliation[Unknown University]
+{Department of Chemistry, Unknown University, Unknown Town}
+\alsoaffiliation[Second University]
+{Department of Chemistry, Second University, Nearby Town}
+\author{Susanne K. Laborator}
+\email{s.k.laborator@bigpharma.co}
+\affiliation[BigPharma]
+{Lead Discovery, BigPharma, Big Town, USA}
+\author{Kay T. Finally}
+\affiliation[Unknown University]
+{Department of Chemistry, Unknown University, Unknown Town}
+\alsoaffiliation[Second University]
+{Department of Chemistry, Second University, Nearby Town}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The document title should be given as usual. Some journals require
+%% a running title from the author: this should be supplied as an
+%% optional argument to \title.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\title[An \textsf{achemso} demo]
+ {A demonstration of the \textsf{achemso} \LaTeX\
+ class\footnote{A footnote for the title}}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Some journals require a list of abbreviations or keywords to be
+%% supplied. These should be set up here, and will be printed after
+%% the title and author information, if needed.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\abbreviations{IR,NMR,UV}
+\keywords{American Chemical Society, \LaTeX}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The manuscript does not need to include \maketitle, which is
+%% executed automatically.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{document}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The "tocentry" environment can be used to create an entry for the
+%% graphical table of contents. It is given here as some journals
+%% require that it is printed as part of the abstract page. It will
+%% be automatically moved as appropriate.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{tocentry}
+
+Some journals require a graphical entry for the Table of Contents.
+This should be laid out ``print ready'' so that the sizing of the
+text is correct.
+
+Inside the \texttt{tocentry} environment, the font used is Helvetica
+8\,pt, as required by \emph{Journal of the American Chemical
+Society}.
+
+The surrounding frame is 9\,cm by 3.5\,cm, which is the maximum
+permitted for \emph{Journal of the American Chemical Society}
+graphical table of content entries. The box will not resize if the
+content is too big: instead it will overflow the edge of the box.
+
+This box and the associated title will always be printed on a
+separate page at the end of the document.
+
+\end{tocentry}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The abstract environment will automatically gobble the contents
+%% if an abstract is not used by the target journal.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{abstract}
+ This is an example document for the \textsf{achemso} document
+ class, intended for submissions to the American Chemical Society
+ for publication. The class is based on the standard \LaTeXe\
+ \textsf{report} file, and does not seek to reproduce the appearance
+ of a published paper.
+
+ This is an abstract for the \textsf{achemso} document class
+ demonstration document. An abstract is only allowed for certain
+ manuscript types. The selection of \texttt{journal} and
+ \texttt{manuscript} will determine if an abstract is valid. If
+ not, the class will issue an appropriate error.
+\end{abstract}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Start the main part of the manuscript here.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Introduction}
+This is a paragraph of text to fill the introduction of the
+demonstration file. The demonstration file attempts to show the
+modifications of the standard \LaTeX\ macros that are implemented by
+the \textsf{achemso} class. These are mainly concerned with content,
+as opposed to appearance.
+
+\section{Results and discussion}
+
+\subsection{Outline}
+
+The document layout should follow the style of the journal concerned.
+Where appropriate, sections and subsections should be added in the
+normal way. If the class options are set correctly, warnings will be
+given if these should not be present.
+
+\subsection{References}
+
+The class makes various changes to the way that references are
+handled. The class loads \textsf{natbib}, and also the
+appropriate bibliography style. References can be made using
+the normal method; the citation should be placed before any
+punctuation, as the class will move it if using a superscript
+citation style
+\cite{Mena2000,Abernethy2003,Friedman-Hill2003,EuropeanCommission2008}.
+The use of \textsf{natbib} allows the use of the various citation
+commands of that package: \citeauthor{Abernethy2003} have shown
+something, in \citeyear{Cotton1999}, or as given by
+Ref.~\citenum{Mena2000}. Long lists of authors will be
+automatically truncated in most article formats, but not in
+supplementary information or reviews \cite{Pople2003}. If you
+encounter problems with the citation macros, please check that
+your copy of \textsf{natbib} is up to date. The demonstration
+database file \texttt{achemso-demo.bib} shows how to complete
+entries correctly. Notice that ``\latin{et al.}'' is auto-formatted
+using the \texttt{\textbackslash latin} command.
+
+Multiple citations to be combined into a list can be given as
+a single citation. This uses the \textsf{mciteplus} package
+\cite{Johnson1972,*Arduengo1992,*Eisenstein2005,*Arduengo1994}.
+Citations other than the first of the list should be indicated
+with a star. If the \textsf{mciteplus} package is not installed,
+the standard bibliography tools will still work but starred
+references will be ignored. Individual references can be referred
+to using \texttt{\textbackslash mciteSubRef}:
+``ref.~\mciteSubRef{Eisenstein2005}''.
+
+The class also handles notes to be added to the bibliography. These
+should be given in place in the document \bibnote{This is a note.
+The text will be moved the the references section. The title of the
+section will change to ``Notes and References''.}. As with
+citations, the text should be placed before punctuation. A note is
+also generated if a citation has an optional note. This assumes that
+the whole work has already been cited: odd numbering will result if
+this is not the case \cite[p.~1]{Cotton1999}.
+
+\subsection{Floats}
+
+New float types are automatically set up by the class file. The
+means graphics are included as follows (Scheme~\ref{sch:example}). As
+illustrated, the float is ``here'' if possible.
+\begin{scheme}
+ Your scheme graphic would go here: \texttt{.eps} format\\
+ for \LaTeX\, or \texttt{.pdf} (or \texttt{.png}) for pdf\LaTeX\\
+ \textsc{ChemDraw} files are best saved as \texttt{.eps} files:\\
+ these can be scaled without loss of quality, and can be\\
+ converted to \texttt{.pdf} files easily using \texttt{eps2pdf}.\\
+ %\includegraphics{graphic}
+ \caption{An example scheme}
+ \label{sch:example}
+\end{scheme}
+
+\begin{figure}
+ As well as the standard float types \texttt{table}\\
+ and \texttt{figure}, the class also recognises\\
+ \texttt{scheme}, \texttt{chart} and \texttt{graph}.
+ \caption{An example figure}
+ \label{fgr:example}
+\end{figure}
+
+Charts, figures and schemes do not necessarily have to be labelled or
+captioned. However, tables should always have a title. It is
+possible to include a number and label for a graphic without any
+title, using an empty argument to the \texttt{\textbackslash caption}
+macro.
+
+The use of the different floating environments is not required, but
+it is intended to make document preparation easier for authors. In
+general, you should place your graphics where they make logical
+sense; the production process will move them if needed.
+
+\subsection{Math(s)}
+
+The \textsf{achemso} class does not load any particular additional
+support for mathematics. If packages such as \textsf{amsmath} are
+required, they should be loaded in the preamble. However,
+the basic \LaTeX\ math(s) input should work correctly without
+this. Some inline material \( y = mx + c \) or $ 1 + 1 = 2 $
+followed by some display. \[ A = \pi r^2 \]
+
+It is possible to label equations in the usual way (Eq.~\ref{eqn:example}).
+\begin{equation}
+ \frac{\mathrm{d}}{\mathrm{d}x} \, r^2 = 2r \label{eqn:example}
+\end{equation}
+This can also be used to have equations containing graphical
+content. To align the equation number with the middle of the graphic,
+rather than the bottom, a minipage may be used.
+\begin{equation}
+ \begin{minipage}[c]{0.80\linewidth}
+ \centering
+ As illustrated here, the width of \\
+ the minipage needs to allow some \\
+ space for the number to fit in to.
+ %\includegraphics{graphic}
+ \end{minipage}
+ \label{eqn:graphic}
+\end{equation}
+
+\section{Experimental}
+
+The usual experimental details should appear here. This could
+include a table, which can be referenced as Table~\ref{tbl:example}.
+Notice that the caption is positioned at the top of the table.
+\begin{table}
+ \caption{An example table}
+ \label{tbl:example}
+ \begin{tabular}{ll}
+ \hline
+ Header one & Header two \\
+ \hline
+ Entry one & Entry two \\
+ Entry three & Entry four \\
+ Entry five & Entry five \\
+ Entry seven & Entry eight \\
+ \hline
+ \end{tabular}
+\end{table}
+
+Adding notes to tables can be complicated. Perhaps the easiest
+method is to generate these using the basic
+\texttt{\textbackslash textsuperscript} and
+\texttt{\textbackslash emph} macros, as illustrated (Table~\ref{tbl:notes}).
+\begin{table}
+ \caption{A table with notes}
+ \label{tbl:notes}
+ \begin{tabular}{ll}
+ \hline
+ Header one & Header two \\
+ \hline
+ Entry one\textsuperscript{\emph{a}} & Entry two \\
+ Entry three\textsuperscript{\emph{b}} & Entry four \\
+ \hline
+ \end{tabular}
+
+ \textsuperscript{\emph{a}} Some text;
+ \textsuperscript{\emph{b}} Some more text.
+\end{table}
+
+The example file also loads the optional \textsf{mhchem} package, so
+that formulas are easy to input: \texttt{\textbackslash ce\{H2SO4\}}
+gives \ch{H2SO4}. See the use in the bibliography file (when using
+titles in the references section).
+
+The use of new commands should be limited to simple things which will
+not interfere with the production process. For example,
+\texttt{\textbackslash mycommand} has been defined in this example,
+to give italic, mono-spaced text: \mycommand{some text}.
+
+\section{Extra information when writing JACS Communications}
+
+When producing communications for \emph{J.~Am.\ Chem.\ Soc.}, the
+class will automatically lay the text out in the style of the
+journal. This gives a guide to the length of text that can be
+accommodated in such a publication. There are some points to bear in
+mind when preparing a JACS Communication in this way. The layout
+produced here is a \emph{model} for the published result, and the
+outcome should be taken as a \emph{guide} to the final length. The
+spacing and sizing of graphical content is an area where there is
+some flexibility in the process. You should not worry about the
+space before and after graphics, which is set to give a guide to the
+published size. This is very dependant on the final published layout.
+
+You should be able to use the same source to produce a JACS
+Communication and a normal article. For example, this demonstration
+file will work with both \texttt{type=article} and
+\texttt{type=communication}. Sections and any abstract are
+automatically ignored, although you will get warnings to this effect.
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The "Acknowledgement" section can be given in all manuscript
+%% classes. This should be given within the "acknowledgement"
+%% environment, which will make the correct section or running title.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{acknowledgement}
+
+Please use ``The authors thank \ldots'' rather than ``The
+authors would like to thank \ldots''.
+
+The author thanks Mats Dahlgren for version one of \textsf{achemso},
+and Donald Arseneau for the code taken from \textsf{cite} to move
+citations after punctuation. Many users have provided feedback on the
+class, which is reflected in all of the different demonstrations
+shown in this document.
+
+\end{acknowledgement}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The same is true for Supporting Information, which should use the
+%% suppinfo environment.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{suppinfo}
+
+A listing of the contents of each file supplied as Supporting Information
+should be included. For instructions on what should be included in the
+Supporting Information as well as how to prepare this material for
+publications, refer to the journal's Instructions for Authors.
+
+The following files are available free of charge.
+\begin{itemize}
+ \item Filename: brief description
+ \item Filename: brief description
+\end{itemize}
+
+\end{suppinfo}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% The appropriate \bibliography command should be placed here.
+%% Notice that the class file automatically sets \bibliographystyle
+%% and also names the section correctly.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\bibliography{achemso-demo}
+
+\end{document}